Hdid011593.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hyposoter didymator
Gene Symbol
Hr39
Assembly
None
Location
scaffold71703:2029561-2059021[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.19 1e+03 -1.4 6.6 45 163 209 326 188 369 0.70
2 4 3 1.6e+04 -6.8 14.7 55 129 381 453 368 487 0.56
3 4 5.7e-08 0.00031 20.1 0.0 1 21 548 568 548 572 0.92
4 4 2.7e-72 1.5e-68 232.0 0.0 97 408 609 929 579 929 0.81

Sequence Information

Coding Sequence
ATGTCGGAACAAAACGGGCCCACGGAGGGCCCGGGCTGGTGGCCACCCTCGCAGTCATGGAAATCAACTAGCAACGCGTCATCGTCGTCATCCTCATCGATTCCGTCCTCGCGCACACTCGAGGCTGGAAAAAATGTTTCTGTCACGACGATCAATGTACCACCGGCCCAGGAAATGCACGACGGCAAAAGCGTATGCAAATATCTGGCAGGGCAAAATGGCGTGACGGTGTCGGTTGTCTCGAACTGCGGAAGTGGTCCAAGCAGCGGTATGGGTACCGGACCCGGAGGCGGCGGAGGAGGAGGGGCCGGAGGTCCATCTTCCTTGTGTCAAGAATCGAATTGCCTCGAGGATCTTGAGGACAGCGACGGTGAAGTTAGTAAAATCGATTTTCGGGGCGTTAATCTACGAACGAAAAAGAAACGAGATGGCTCTGGTGGATCGGAGAACGAATGCGGTGCCGTGGGCGCCGACAATCTCGAGCAACAACAACCAGAGAGACCAATGTCATGGGAGGGTGAATTATCCGATCAAGAAATGTCTTCCAATACCCTAACGAATCAGGATCACGAAGAAACGTCGATGGAAGGGGTGCAAGTGTGCGGAGCGAGTCCAGGGCCGCAGGAGCAAAAGTTCCCGATAAAGCCAGAGCCTGATTTCCGGTCGAGTCCAAGTTTGTTAATCGGTTCGCACAACGACGGGAGTTTGGGCTTGTCGCATGTTCAGCAAATGCAGCAGCAGCAGCAACAGCGAGGTATCGATGGTTTGGAGTCGACGCAACAGAGCGATCTTCCGTTGTTGGTTGGGAAGCTTTTGGGTGGTTACAGCAGTTCGACGCCGAATCATAGTCCGATATTGAATCCGCGGCATCATTTGACAAAGCACAGTCATACGAGGTCGCAGGTGCCTTCACCAGACTCGGCGATTCATTCGGCGTACAGCGTGTTCAGTTCACCGACGCAGAGTCCGCACGCGGCTCGTCACTCGGCCCTTGGGGCTGGCAGTCCAGTGCCATCCTCGTCATTGTCACGTCATAGTTTCAACAATTCAACCTCTTCGCTATCGCTTTCGTTGTCGCATTCATTGTCTCGCAATAATTCAGACGCTTCGAGCAGTTGCTACAGTTATGGCTCGCTGAGTCCACCCACGCATTCGCCGATCCAGCAGCCGAGACACTCGCACGCGCAGCATCACCACCACCACCATCATCAGCAGCAGCAACAGCAGCAACAGCAGCAGCAGCATCAACAGCAATTATCACAAGCTGGTAGCCCGTTGCATTTAGCTTCATCAACAGCCACCAATCCTCACAATTACGCTCATCAAGCTTCGGAAATATCCTCAGAGGGCGGTCATTCCGAGGATCAGGAAGATTGTAAAATCCCAACTGCGACTTCGGGTATCTCGACGAGGCAGCAACTCATCAACAGCCCATGTCCGATTTGCGGCGACAAAATAAGTGGTTTTCATTATGGGATATTCTCGTGCGAATCTTGCAAAGGTTTCTTCAAAAGGACCGTGCAAAATCGAAAAAATTACGTTTGTCTCCGTGGCGCTGGCTGCCCCGTCACCGTCGCTACCAGGAAAAAATGTCCTGCCTGTCGTTTTGACAAATGTCTCAATATGGGCATGAAGCTCGAAGCCATTCGGGAGGACAGGACTCGTGGTGGAAGAAGCACTTATCAATGCACTTACACACTGCCGGCGAATTTGATCGGGAGCTCCGGGGGTGGCTTGTCCAATGACAAAATGACCGGCGGCAATTGCAGTCCGGCTCCGCCTGGCTCCGAGCATCATCATTCCGCCAGGCACCATTGGAACCATTCCCACAAGATCCAAGTCGTGCCACAACTCCTCCAGGACATTATGGACGTCGAGCATTTATGGCACTACAACGACAACGATCGAGTCACCGGTGGAAGTCAAAATGTTTCCGGCGGTGGCAATGGGTCGCCCATGCCCAACGACATGCCCGGACTCGGGATAAGCGGTCTGGGCTCCGGTGCTGGCACCGGAACCGTCAACGCCTCTACGAACAACGGCAACGTTGACAATCGCTGCGAAACTACAAGGTCCAATAATTCACCGTCCAGTCTCAACAACGAACAGCATCAACAACAAAATTCAACCTCCAACAATGCCACCAACGGGAGCAACAACTCAAGCCCCAATCCCAATGGCAACACCACACAAAATCCTGATTTTCTATCGAATCTCTGCAACATCGCCGACCATCGACTATACAAAATTGTTAAATGGTGCAAAAGTTTGCCCCTTTTCAAAAATATTTCTATCGACGATCAGATTTGCCTGTTGATTAATTCCTGGTGCGAATTGCTCTTGTTCTCCTGCTGCTTTCGCAGCATGAGCACTCCCGGCGAAATTAGAGTCTCGCTTGGAAAATCCATTACTCTCGAACAAGCCAGACAATTGGGACTTGCCACGTGTATCGAAAGGATGCTCGCTTTCACTAATAATTTGAGGAGGCTCAGGGTCGACCAGTACGAATACGTCGCGATGAAGGTTATCGTCCTCCTGACATCGGACACGAGCGAGCTTAAGGAACCGGAGAAGGTGAGAGCTTCGCAGGAGAAAGCCCTGCAAGCTCTCCAGCAATACACGATTGCGAGGTATCCAGAAATGCCAGCGAAATTCGGTGAGCTATTGCTCCGAATACCGGACCTTCAAAGGACTTGTCAAGCGGGCAAAGAGTTGCTCAGTGCCAAAAGGGCCGAAGGAGAAGGCAGTTCGTTCAATTTGTTGATGGAATTGCTTAGAGGAGATCACTGA
Protein Sequence
MSEQNGPTEGPGWWPPSQSWKSTSNASSSSSSSIPSSRTLEAGKNVSVTTINVPPAQEMHDGKSVCKYLAGQNGVTVSVVSNCGSGPSSGMGTGPGGGGGGGAGGPSSLCQESNCLEDLEDSDGEVSKIDFRGVNLRTKKKRDGSGGSENECGAVGADNLEQQQPERPMSWEGELSDQEMSSNTLTNQDHEETSMEGVQVCGASPGPQEQKFPIKPEPDFRSSPSLLIGSHNDGSLGLSHVQQMQQQQQQRGIDGLESTQQSDLPLLVGKLLGGYSSSTPNHSPILNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPIQQPRHSHAQHHHHHHHQQQQQQQQQQQHQQQLSQAGSPLHLASSTATNPHNYAHQASEISSEGGHSEDQEDCKIPTATSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLIGSSGGGLSNDKMTGGNCSPAPPGSEHHHSARHHWNHSHKIQVVPQLLQDIMDVEHLWHYNDNDRVTGGSQNVSGGGNGSPMPNDMPGLGISGLGSGAGTGTVNASTNNGNVDNRCETTRSNNSPSSLNNEQHQQQNSTSNNATNGSNNSSPNPNGNTTQNPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00059522;
90% Identity
iTF_00266535;
80% Identity
iTF_00828805;