Hdid004976.1
Basic Information
- Insect
- Hyposoter didymator
- Gene Symbol
- Lrrfip2
- Assembly
- None
- Location
- scaffold128227:139141-143046[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2e-117 3.2e-113 377.8 32.8 1 300 29 324 29 324 0.97 2 3 0.0034 56 2.7 2.6 122 171 324 373 322 379 0.91 3 3 0.033 5.4e+02 -0.5 4.9 195 237 356 397 343 401 0.55
Sequence Information
- Coding Sequence
- ATGGAGTCGACTATAGCGGGACGAAGACGCAACGCTACGAGGCATTCTGCCGAGGATCAAGCGCTCGACCAGATAGCCAAAGAGGCAGAAGCGAGACTGGCTGCACGGAGACAGGCCCGTGCTGAAGCTCGGGAAATTCGGATGAGAGAATTGGAAAGACAACAAAAAGAAGTGGAGGAGAATGCGGATAGAGTTTACGATATGTGCTCGGAAGGAAACAGAACAATGCGAGTAACGCCTGACCCAGTGAGGACGTCACGCATACTGGCAAATTCGAACAATTTTCAGTCGAGCAGAAGATCATCGGAAGATTCGTTGGAAGATACAGGATTAAGCAGAGATCTCAGATTAGAGCTCAAAGAATTCGAAGAAAAGTTTAGAAAAGCGATGATAGCGAACGCTCAGTTGGACAACGAAAAATCATCATACGCATATCAAGTCGATTTATTAAAAGACAAACTCGAAGAGTTGGACGAAACGACTGCACAACTGAGACGCGAGCTTAGGGAAAAGAATAGAGAAGCCGAACAACTGAAACGCGTGAGTCAGCGATTAAAGGAAGATTTCGATGTTTGCAGAGCTCAATTGTTGGAGAGGGACACTCTTATTCAGGAAAATGGACTTGTCATCGTGGACGACGAGGGTAGTGGAGACGAAGAGCATGAAACGGTCAACGGATATAGGAAAAGAGTACTAGTCAGCACAGAGGCTGCCGAGTTGTTGGAAAATGCTGGTGAAGGCTCGTTAGACGTTCGATTGAGAAAGTTTGCTTCCGAGAAGAAGGAGCTACAGGATGAAATTGGTCACTTGAGATTGGAGTTGGAAGAAGCAAAGAGTCGTTTGAGATCAGAAAAATCCTCAGGTTCAGTATTAGGTGGATTTTCCGATTCTGAGGATGTTCAGAGAGAGGCGAACAAATTGCTGGCGGATTATAAATTTAAATTGCAAAAAGCTGAACAAGACATGTCCACGTTACAGGCAACCGTCGCCAGGCTAGAGAGTCAAGTTATACGTTATAAATCCGCGGCTGAAGCATCGGAAAAAGCGGAAGATGAATTGAAAGTTGAGAAGAGAAAATTACAAAGAGAGGTTCGCGAATCGCAAGGTCGTGTTGAGGAGCTCGAAACAGCCAATTCCCATTTACAGAGACGATTGGACAAACTGAAAAATGCCAAGTCCGCACTTCTCAAAGATGCGTCTCAAAGATAA
- Protein Sequence
- MESTIAGRRRNATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEVEENADRVYDMCSEGNRTMRVTPDPVRTSRILANSNNFQSSRRSSEDSLEDTGLSRDLRLELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELDETTAQLRRELREKNREAEQLKRVSQRLKEDFDVCRAQLLERDTLIQENGLVIVDDEGSGDEEHETVNGYRKRVLVSTEAAELLENAGEGSLDVRLRKFASEKKELQDEIGHLRLELEEAKSRLRSEKSSGSVLGGFSDSEDVQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRESQGRVEELETANSHLQRRLDKLKNAKSALLKDASQR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_01102050;
- 80% Identity
- -