Basic Information

Gene Symbol
NCOR1
Assembly
None
Location
scaffold128243:2180051-2193258[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.7e-09 3.2e-06 27.0 0.0 3 43 675 715 674 718 0.96

Sequence Information

Coding Sequence
ATGTTATTGTCGGCGAGCGAGTGGGGAGTAGTACATAATGCGCCGCCAAGGGTGATGGAGACTGTGGGCAAGCAAGTCCAAGTAGTGAGTGGACTGGGAGTGGGGGGTCCGGTAGGGCCTGTCGGCCCTGTGGGGGGAGATTTGCATCACCATCATCACCACACGCACCCCCACGGGGGCCATGGCCACTCGATGGTCGGGACGGGGCCGAATCCAGGCCGCGTTCAAGTCCAGAATCATTTGGGCCAGCCACCCCCGCCCTCTCACAATCAGCATTTACCAGCGAGATCAACCCCCGTACAGTTGCACAGGCCTACACAGAGCTACATAAGCATCAACAAGAGCAGCAGTCCCGTGTCACCGCGTACAGTCGCGGGAGGTAACTACGTTCAAGGAGCACCGGGAGGAAGCCCGTCGGGTGGTGGAGCGGTCGGTCCACCGGTCGGTGCGAGCGGGACAGGCGGCGTCGTCACCGTAACCGCAACCGGTACAGCACCGGGAAATTACGTTACCGTCCCTGTTCCCAATGCTCTTCGATATGTACACGCTTATCCACCGCCACCACCCCCACCTCCGGCACCGTCGGCCCCCGTTAACCAGACGCCACCGCCACCCGGAGCTACTGCCGCATACACGAGGGATCCCTACAGAAATGCCACCCCCAACGTTAACGAGAGGGTGGCGATCAGCGTGAGCAGCAGTCCGGTGTCGCAGGTGGGTGTCGGGGTCGGGGTCGGCGTCGGAGTCATTGCCGGTGAATATGCGGTCAACAGTCGCGGGGATCGGCCACGAATATCCCTTTTACCACCTGCCTCGGTAGCCCCGGCACCCTCGCCAACGGGAACCGAGTATCACGTTGCCGGAGCACGAAATCCTCGAGGAATGATGCCGATGCAGACCGAGCCGTACTGCAATCGCGGAGTCGACATGGCCACGCTCCAGGAAGCTCCGCCATTTAAAAAAATTAGGCTCGGCCAACCGCAGCAGCAACAGCAACAGCCACAGCAACAGCAACAGCAACAGCAACAGCAGCAGCAGAGCCAGCAACAGCAACAACAATCGTGTCAACCAATCTCACCGGCTGATACGTGTATCAAGCAGGAACACGTGCAGTTGCAGCAACCACTCAGGATAGATACGAGGGAGCAGCCGCCAACGGCAGGTGCGTACACCCCGCAAACCGAAGCGATCTCGCCTACCCTACCGGAGCCTAGTACGCAAGAGGATGCTCAATTTCGTAGTACCAAGGACGATTTGCTTCAACAAATAGCGAAAGTTGATCGGGAAATTGCCAAGCGGGAGTCTCAGATTAGTAAGCTTCGTAAGAAGCTCAAGGAACTCGAGGAAACGGCAAGCAAACCCCTGGAGGCCGCTGGGCTCAAACGACCGGTCGAGGAACAGTCGCTGCAACCGAAGCATCAGTCATTGGCACAAAAAATCTATGCTGAAAATAGGAAAAAGGCGGAAGAAGCCCATCGGCTACTCGACCGACTCGGTCCGAAGGTCGAGCTCCCGTTGTACAATCAACCCTCGGACACTAACGTTTACCAGGAGAATCGAACGAGGCATCAGTCCTGCATGCGTGCTAGGCTCGTCGCCAGGTTACGAAGAGAGCACGCCGAAAGAGCTTCGCTCCATCGCCAGCAGTCCCAAACCTATGCGATTCTTGTTCAGGAGTGGCATCGCAAGGTCGAACGATTAGAGGCAACGCAAAAGAGGAAGTCCAAAGAGACTAAGAATCGTGAATTTTTCGAGAAGGTATTTCCCGAATTGCGAAAGCAGAGAGAGGATAAAGAGCGATTCAACAGGGTCGGCGCTCGTATTAAAAGCGAGGCCGATCTCGAAGAAATCATGGATGGTCTTCAGGAGCAAGAGATGGAGGATAAAAAGATGCGTTCGTACGCGGTTATTCCGCCGTTGCTACTGGACGCGAGACAGCGAAGGATAGCGTTTCAAAATCGGAATGGCTTGCTGCCACCTGAGGAACTCGAGTCGCTTCATCGGGAGCGGAAGCTGATCAACGTATGGAGCCCAATGGAGCACGAGCTCTTCAAGGAAAAGTATCTTCAGCATCCCAAGAACTTTGGAGCTATAGCTCAATCGTTGGAACACAAGTCGGTTCCGGACTGCGTGCATCATTACTACCTCACTAAAAAAGCTGAAAATTACAAGCAGCTTTTGCGAAAGTCGCGGCAACGAACGCGTAGCTCGCGAAACAATCCTAACAATAAGGTAAACAATAGTAATTCGACGCTCGGAGCGATAGATATATTAACGACGGGCGTCACAACGAGGCTGCAGCGCGAGCAGCAACAAAAGACGCAGGAGAATCCTCAAAACAGTTCAGCTTCGTCGTTGAGCTCAACAACCGCGACGTCCGCCGTTTCGGTTGCCTCGTCGTCCTCAGCCTCGGCTACAACGTCCTCGACGTCTTCGACAACGGTTAACGCAACAGCGTCGACAACTACGGGACTGACAACGACGACGACGGCGTCAACGACAACAACGACGTCGGCCACCGCATCAGCGACAGCCACGACCACAACGACGAGTACAACGTCGATGGGTTCTTCATCAATTACCACCGGAGTATCGACCGTGTCGAGCGCCGCAACGACTTTGACCACGATGTCAGGCTCGGGAACGGGAACCGCGACGGGGACGGGGACGTCAGGAAATAGTACCTCTACATCCTCCACAATCTCGTCGTCGAGTTTGTCCGTTGCGTCGATCGAAAGTACCGCAATGTCGACTTCAACAACCAACGCCACATCCGTCCAAACTAGTACAACCTCTACGACCGGTGTTCTCACGAGCTCCTCGACTTGTAGCGCAAAGGACGCGAGAGAAGCCAACAAAGAGAACAAGGAGAACAAACTCGAGGGCGCCATGAAAGATACCATTGTCAAAGATACGAGGGAAGACTCGCATTCTAGCTCTGACATCATTTCCGGAAAAGACTCGAAACTCGCTGCTTCCGAAAGTGCGTTGGTGTCGTCGTGTTTGAATGTGAGTGGCACGAACGTCGTGGGCTCGTTACAAACGGAAAAAGACAAAAAGAAAGCACCATCGATTGCAACAGGGACAACGTCTTCGTCGACGATGACAACGTCCACGACGACGACGACGACAACGACGTCAAGTGTGACCGGTGGTACCAGCAGCAGCACCACAACCACCACCACCGCCACCAGCGGTAGGTCAAAGGATAAGAAGAAAGAGAATCACGCGACGCCCATGGAGACGAGCGACGAAGAGGCCCAGACGATCGACAATATTGGTAAGTAG
Protein Sequence
MLLSASEWGVVHNAPPRVMETVGKQVQVVSGLGVGGPVGPVGPVGGDLHHHHHHTHPHGGHGHSMVGTGPNPGRVQVQNHLGQPPPPSHNQHLPARSTPVQLHRPTQSYISINKSSSPVSPRTVAGGNYVQGAPGGSPSGGGAVGPPVGASGTGGVVTVTATGTAPGNYVTVPVPNALRYVHAYPPPPPPPPAPSAPVNQTPPPPGATAAYTRDPYRNATPNVNERVAISVSSSPVSQVGVGVGVGVGVIAGEYAVNSRGDRPRISLLPPASVAPAPSPTGTEYHVAGARNPRGMMPMQTEPYCNRGVDMATLQEAPPFKKIRLGQPQQQQQQPQQQQQQQQQQQQSQQQQQQSCQPISPADTCIKQEHVQLQQPLRIDTREQPPTAGAYTPQTEAISPTLPEPSTQEDAQFRSTKDDLLQQIAKVDREIAKRESQISKLRKKLKELEETASKPLEAAGLKRPVEEQSLQPKHQSLAQKIYAENRKKAEEAHRLLDRLGPKVELPLYNQPSDTNVYQENRTRHQSCMRARLVARLRREHAERASLHRQQSQTYAILVQEWHRKVERLEATQKRKSKETKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEMEDKKMRSYAVIPPLLLDARQRRIAFQNRNGLLPPEELESLHRERKLINVWSPMEHELFKEKYLQHPKNFGAIAQSLEHKSVPDCVHHYYLTKKAENYKQLLRKSRQRTRSSRNNPNNKVNNSNSTLGAIDILTTGVTTRLQREQQQKTQENPQNSSASSLSSTTATSAVSVASSSSASATTSSTSSTTVNATASTTTGLTTTTTASTTTTTSATASATATTTTTSTTSMGSSSITTGVSTVSSAATTLTTMSGSGTGTATGTGTSGNSTSTSSTISSSSLSVASIESTAMSTSTTNATSVQTSTTSTTGVLTSSSTCSAKDAREANKENKENKLEGAMKDTIVKDTREDSHSSSDIISGKDSKLAASESALVSSCLNVSGTNVVGSLQTEKDKKKAPSIATGTTSSSTMTTSTTTTTTTTSSVTGGTSSSTTTTTTATSGRSKDKKKENHATPMETSDEEAQTIDNIGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2