Basic Information

Gene Symbol
NCOR1
Assembly
GCA_037043255.1
Location
CM073310.1:12744404-12756495[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.9e-09 3.8e-06 27.1 0.0 3 43 664 704 663 707 0.96

Sequence Information

Coding Sequence
ATGGAGACTGTGGGCAAGCAAGTCCAAGTAGTGAGTGGACTGGGAGTGGGGGGTCCGGTCGGGCCTGTCGGCCCTGTGGGGGGAGATTTgcatcaccatcatcatcaccacACGCACCCCCACGGGGGCCATGGCCACTCGATGGTCGGCACGGGGCCGAATCCAGGCCGCGTTCAAGTCCAGAATCATCTGGGCCAGCCACCCCCGCCCTCACACAATCAGCATTTACCAGCTAGATCAACCCCCGTTCAGTTGCACAGgcCTACACAGAGCTACATAAGTATCAACAAGAGCAGCAGCCCCGTGTCACCGCGTACAGTCGCGGGAGGCAACTACGTTCAAGGAGCTCCGGGAGGAAGTCCGTCGGGTGGCGGAGCGGTCGGTCCACCGGTCGGTGCGAGCGGGACAGGCGGCGTCGTTACCGTAACCGCGACCGGTACACCACCGGGAAATTACGTTACCGTACCTGTTCCCAATGCTCTTCGATATGTCCACGCTTATCCACCGCCACCACCGCCACCTTCGGCACCGTCGGCCCCTGTTAACCAGACGCCACCGCCACCCGGAGCTACTGCCGCATATACGAGGGATCCCTACAGAAATGCCACCCCCAACGTTAACGAGAGGGTGGCGATTAGCGTGAGCAGCAGCCCAGTGTCGCAGGTGGGTGTCGGGGTCGGTGTCGGTGTCGGAGTCATTGCCGGTGAATATGCGGTTAACAGTCGCGGTGATCGGCCACGAATTTCCCTTTTACCACCTGCTTCGGTAGCCCCGGCACCCTCGCCAACGGGAACCGAGTATCATGTCGCTGGAGCGAGAAATCCTCGGGGAATAATGCCGATGCAGACCGAGCCGTATTGCAATCGCGGAGTCGATATGGCCACGCTCCAGGAAGCACCGCcgttcaaaaaaatacgtCTCGGCCAACCGCAGCAGCAACAGCCACAGccacagcaacagcaacagcagcagcagcagcagcagcagcagcaacagcagcagcagagccagcaacagcaacaacaaccgtGTCAACCAATCTCACCGGCTGATACATGCATCAAGCAGGAACACGTGCAGTTGCAACAACCACTTAGGATAGATACGAGGGAGCAGCCGCCAACGGCAGGTGCGTACACTCCGCAAACCGAAGCGATCTCTCCTACCCTACCGGAGCCTAGTACACAAGAGGATGCTCAATTTCGTAGTACCAAGGACGATTTGCTTCAACAAATAGCGAAAGTCGATCGGGAAATTGCCAAGCGGGAGTCTCAGATTAGTAAGCTTCGTAAAAAGCTCAAGGAACTCGAGGAAACGGCAAGCAAACCCCTGGAGGCTGCTGGTCTCAAACGACCGGTTGAGGAACAGTCGCTCCAACCGAAGCATCAGTCGTTGGCACAAAAAATCTATGCTGAAAATAGAAAAAAGGCGGAAGAAGCACATCGGCTACTCGACCGACTGGGTCCCAAGGTCGAACTCCCCTTGTACAATCAACCCTCCGACACTAACGTTTACCAGGAGAATCGAACCAGGCATCAGTCCTGCATGCGTGCTAGACTCGTCGCCAGGTTACGAAGAGAGCACGCTGAAAGAGCTTCGCTCCATCGTCAGCAGTCCCAAACTTATGCGATTCTTGTTCAAGAGTGGCATCGCAAGGTCGAACGATTGGAGGCTACGCAAAAGAGGAAGTCCAAAGAGACTAAGaatcgcgaatttttcgagaaggTATTTCCCGAATTGCGAAAGCAGAGAGAGGATAAAGAGCGATTCAACAGGGTCGGCGCTCGTATTAAAAGCGAGGCCGATCTCGAAGAAATCATGGATGGTCTTCAAGAGCAAGAGATGGAGGATAAAAAGATGCGTTCGTACGCGGTTATTCCGCCGTTGCTACTGGACGCGAGACAGAGGAGGATAGCGTTTCAAAATCGAAATGGCCTGTTGCCACCTGAGGAACTCGAGTCGCTTCATCGGGAGCGCAAGTTGATCAACGTATGGAGCCCAATGGAGCACGAGCTCTTCAAGGAAAAGTATCTTCAGCATCCCAAGAACTTTGGAGCTATAGCTCAATCGTTGGAACACAAGTCGGTTCCGGACTGCGTGCATCATTACTACCTCACtaaaaaagctgaaaattaCAAGCAGCTTTTGCGAAAGTCGCGGCAACGAACGCGTAGCTCGCGAAACAATCCTAACAATAAGGTAAACAATAGTAATTCGACGCTCGGAGCGATAGATATTTTAACGACGGGCGTTACAACGAGGCTGCAGCGCGAGCAGCAACAAAAGACGCAGGAAAATCCTCAAAACAGTTCAGCTTCGTCGTTGACTTCGACAACCGCGACGTCGGCCGTTTCGGTTGCCTCGTCGTCCTCAGCCTCGGTAACAACGTCCTCGGCGTCTTCGACAACGGTAAACGCAACTTCGTCGACGACCACGGGAataacaacgacgacgaccgCGTCAACGACAACAACGACCTCGGCCACAGCATCAGCGACAGCCACAACCACAACGACAACTACAACGTCGATGGGTTCCTCATCCATTACCACCGGTGTGTCAACCGCGTCGAGCACCGCGACCACTTTGACCACGTTGTCAGGCTCGGGAACGGCAACTGCGACGGGGACGTCAGGAAATAGTACCTCGACCTCCTCCACTATCTCGTCCTCGAGTTTGGCTCTTGCGTCGATCGAAAGTACCGCAATGTCGACCTCAACAACCAACGCCACATCCGTCCAAACTAGTACAACCTCTACGACCGGTGTTCTCACGAGCTCTTCCACTTGTAGCGCTAAAGACGCCAGAGAAGCCAACAAAGAGAACAAGGAAAACAAACTCGAGGGCGCCACCAAGGATACCATTGTCAAAGACACGAGAGAAGACTCTCATTCTAGTTCTGATATCATTTCCGGAAAAGACTCGAAACTCGCTGCTTCCGAAAGTGCGTTGGTGTCGTCGTGTTTGAATGTGAGTGGCACGAACGTCGTGGGCTCGTTACAAAcggaaaaagacaaaaagaaaGCACCATCGATCGCAACGGGGACGACGTCTTCCGGTAGGTCAAAGGATAAGAAGAAAGAGAATCACGCGACGCCGATGGAGACGAGCGACGAAGAGGCCCAGACGATCGACAATATTGGTACGTAa
Protein Sequence
METVGKQVQVVSGLGVGGPVGPVGPVGGDLHHHHHHHTHPHGGHGHSMVGTGPNPGRVQVQNHLGQPPPPSHNQHLPARSTPVQLHRPTQSYISINKSSSPVSPRTVAGGNYVQGAPGGSPSGGGAVGPPVGASGTGGVVTVTATGTPPGNYVTVPVPNALRYVHAYPPPPPPPSAPSAPVNQTPPPPGATAAYTRDPYRNATPNVNERVAISVSSSPVSQVGVGVGVGVGVIAGEYAVNSRGDRPRISLLPPASVAPAPSPTGTEYHVAGARNPRGIMPMQTEPYCNRGVDMATLQEAPPFKKIRLGQPQQQQPQPQQQQQQQQQQQQQQQQQQSQQQQQQPCQPISPADTCIKQEHVQLQQPLRIDTREQPPTAGAYTPQTEAISPTLPEPSTQEDAQFRSTKDDLLQQIAKVDREIAKRESQISKLRKKLKELEETASKPLEAAGLKRPVEEQSLQPKHQSLAQKIYAENRKKAEEAHRLLDRLGPKVELPLYNQPSDTNVYQENRTRHQSCMRARLVARLRREHAERASLHRQQSQTYAILVQEWHRKVERLEATQKRKSKETKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEMEDKKMRSYAVIPPLLLDARQRRIAFQNRNGLLPPEELESLHRERKLINVWSPMEHELFKEKYLQHPKNFGAIAQSLEHKSVPDCVHHYYLTKKAENYKQLLRKSRQRTRSSRNNPNNKVNNSNSTLGAIDILTTGVTTRLQREQQQKTQENPQNSSASSLTSTTATSAVSVASSSSASVTTSSASSTTVNATSSTTTGITTTTTASTTTTTSATASATATTTTTTTTSMGSSSITTGVSTASSTATTLTTLSGSGTATATGTSGNSTSTSSTISSSSLALASIESTAMSTSTTNATSVQTSTTSTTGVLTSSSTCSAKDAREANKENKENKLEGATKDTIVKDTREDSHSSSDIISGKDSKLAASESALVSSCLNVSGTNVVGSLQTEKDKKKAPSIATGTTSSGRSKDKKKENHATPMETSDEEAQTIDNIGT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00828721;
90% Identity
iTF_00828721;
80% Identity
-