Hdid003463.1
Basic Information
- Insect
- Hyposoter didymator
- Gene Symbol
- bab1
- Assembly
- None
- Location
- scaffold161:1500104-1503971[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-16 6e-13 48.1 0.0 5 43 1 40 1 42 0.95 2 2 1.4 1.6e+03 -1.2 1.1 6 15 117 126 115 130 0.89
Sequence Information
- Coding Sequence
- ATGGCCGAAGCGATCTTCAGCGTCCTCAAGGAAGGACTTTCTCTCAGCCAAGCTGCCAGGAAGTACGACATCCCGTATCCGACTTTCGTACTGTACGCGAATCGAGTGCACAACATGCTCGGTCCAAGCGCCGATGGCGGGGCCGGTGAGTATCTTCGACCGAAGGGTCGTGGGAGACCACAAAGGATTCTACTGGGCGTTTGGCCCGATGAACACATACGCGGCGTCATAAGAACCGTCGTGTTTCGCGATGGCAACATCAAGGAAGAACCAACACCGATTTATCCGAGCCTGACGAATTACGCTTGCAACGGTCCCGAGGGTGCGGTCAGTCCCGGTGCCGCAGCCGCTGCTGCGGTCGCTGCGGTCGCTCAAGGTCTCCGGCATCAAATGTGCAGTATGGTGGCAGCTGCCCAGTCGCACCAGCACGACATGATAGCGACGAATTTATCAGCAAATTTCCAAACAGCAGTGCAAGTGAGTCAGCACCATTTGAACAACAATAGTCCTCCGAGCAGCAACAACAACAACAACAGCAATAGCAACAATAACAACAACAACAACAACAATAGCAACAGTAACAACAGAAATTCGCCATTGATGTTGGGACTGCCGAGTCCAGGATCGGGCGGTCCACCGGAGAGTCCGATCGAGGGAAGTCCATTGGCAAGTCCATTGGCGCCGTTGATGGATCCGGCGCACATACCGAGCAGCGTCGAAGTTGGAATCGGGGTTAGCGGAATGACCTACAAGCCCAATCGAAGTTTCATAAGTCCGAGGCCGGACAATCTTTTCCAAGAGGATATTTCCGACCTGGTGAAAAGCGCCCATTCCCACAAGGACAAGGACAAAATTCCCGTCAAACTCGAGCCACTGGGCGAGTCACGAAGCGAGCAATAA
- Protein Sequence
- MAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGAGEYLRPKGRGRPQRILLGVWPDEHIRGVIRTVVFRDGNIKEEPTPIYPSLTNYACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAQSHQHDMIATNLSANFQTAVQVSQHHLNNNSPPSSNNNNNSNSNNNNNNNNNSNSNNRNSPLMLGLPSPGSGGPPESPIEGSPLASPLAPLMDPAHIPSSVEVGIGVSGMTYKPNRSFISPRPDNLFQEDISDLVKSAHSHKDKDKIPVKLEPLGESRSEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01057558;
- 90% Identity
- iTF_01057558;
- 80% Identity
- -