Basic Information

Insect: Hypomecis punctinalis
Gene Symbol: -
Assembly: GCA_949316475.1
Location: OX438807.1:21093427-21109994[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.6 2.8e+02 3.6 0.2 2 23 106 127 105 127 0.95

2 18 0.047 5.1 9.1 0.5 2 22 131 151 130 153 0.88

3 18 0.053 5.7 8.9 2.3 3 23 376 397 374 397 0.95

4 18 1.9 2e+02 4.1 0.0 3 19 407 423 405 425 0.95

5 18 0.046 5 9.1 0.3 2 23 436 457 435 457 0.94

6 18 0.067 7.3 8.6 1.8 1 23 505 527 505 527 0.97

7 18 3.1 3.3e+02 3.4 4.1 1 23 565 590 565 590 0.90

8 18 0.58 63 5.7 0.7 2 23 601 623 600 623 0.88

9 18 0.1 11 8.0 1.3 1 23 628 651 628 651 0.96

10 18 0.00087 0.095 14.6 1.7 1 23 657 679 657 679 0.97

11 18 0.0002 0.022 16.6 1.1 1 23 686 708 686 708 0.98

12 18 0.00011 0.012 17.4 2.3 1 23 713 735 713 735 0.96

13 18 1.4e-07 1.6e-05 26.5 1.4 1 23 741 763 741 763 0.98

14 18 2.6e-06 0.00028 22.5 1.2 1 23 769 791 769 791 0.97

15 18 2.5e-05 0.0028 19.4 2.3 2 23 798 819 798 819 0.97

16 18 0.00017 0.018 16.8 0.5 2 23 829 851 828 851 0.97

17 18 1.1e-05 0.0012 20.5 0.3 1 23 856 878 856 878 0.99

18 18 0.016 1.8 10.5 3.0 1 23 884 907 884 907 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.6	2.8e+02	3.6	0.2	2	23	106	127	105	127	0.95
2	18	0.047	5.1	9.1	0.5	2	22	131	151	130	153	0.88
3	18	0.053	5.7	8.9	2.3	3	23	376	397	374	397	0.95
4	18	1.9	2e+02	4.1	0.0	3	19	407	423	405	425	0.95
5	18	0.046	5	9.1	0.3	2	23	436	457	435	457	0.94
6	18	0.067	7.3	8.6	1.8	1	23	505	527	505	527	0.97
7	18	3.1	3.3e+02	3.4	4.1	1	23	565	590	565	590	0.90
8	18	0.58	63	5.7	0.7	2	23	601	623	600	623	0.88
9	18	0.1	11	8.0	1.3	1	23	628	651	628	651	0.96
10	18	0.00087	0.095	14.6	1.7	1	23	657	679	657	679	0.97
11	18	0.0002	0.022	16.6	1.1	1	23	686	708	686	708	0.98
12	18	0.00011	0.012	17.4	2.3	1	23	713	735	713	735	0.96
13	18	1.4e-07	1.6e-05	26.5	1.4	1	23	741	763	741	763	0.98
14	18	2.6e-06	0.00028	22.5	1.2	1	23	769	791	769	791	0.97
15	18	2.5e-05	0.0028	19.4	2.3	2	23	798	819	798	819	0.97
16	18	0.00017	0.018	16.8	0.5	2	23	829	851	828	851	0.97
17	18	1.1e-05	0.0012	20.5	0.3	1	23	856	878	856	878	0.99
18	18	0.016	1.8	10.5	3.0	1	23	884	907	884	907	0.97

Sequence Information

Coding Sequence: ATGTCTTCGGACGATTCTGAAGATGAGCCTTTATCAGTTTTGGCCGCGAAGAAAAGTGACAATTGTGGAGTTAAATCACATTCAGTATCCAAAACAGGTGGTTCGTTGAAACTGAAAATCAAAAAGGAAAATATATTGATTCCACCTGTAAATCCAGGAGACCTATTGCCGGCGATTGTTGAAAGACCGACTGATGTGTGGTTATATTTGAATGATTTCAATCTTACTGGGCCTTATACCTGTCTTTTATGCTCAGAATGGTTCATAAACAGGAATAGAATAGTTATTCACTATGTGATTGATCACAAGAAAGATTACTGTGGAATTTGCAGATACTTAGTACCAAACAGAGAAACATGGCAGGAGCACCAGAAATTCCACACACCTTGGAAATGCTCTCAATGTACACAAAGATTTCCAACTCAGTTAATGCTACGTGAACACTTCAGTGATGCCCACAACCTTGTTCACTGCCGGTTTTGCTATCTGCGCCTGCCCAACAATGACGAGTATTACGGACATTTACTTCAAAAACATTCCGTCACAAATACGTCAAGCATAAACGAAGACTGTTTGTGGGATTTCGAATGTAAAGGTGATCAAAAGTTTACATGCTTACTCTGCTCGAAATCAGTTGATGTGGGTAAACAGTTTGCAGATCACTTCATGTCATTCCATCACTTCACCTTGAAATGCTTCATGTTCTTCATTGCCGGCATCGATCTACCGTTCAAAGTGAAAGGAGCAGAATTATCACCGGAATTTGTCGATACACAGCTAAAAGCATACAGCACTTTTGGCTACGTCGATTTTATTAAGAGTCTAAAATTCAAGGAAGAATCTGTAACAGTTACTGAAGAAATACCGATTACTGTTGATTGTCAACCAGAGTTGAAAGAGCTTAGTGAATCTTTTGAAGATACTGAAGATTTGAAGCTTTGCGAAGAAATTAGAGGCTACAGAGGTGTCCAAGATTTTGATGTGACACTTGTAGAAGTCATTACGATGCAGAAGTATTATATAGATTATGTAAATGCGACACTAAATGATATAAATTCAAATGAGATGCCGTTGTCATCAGAAATTATGTATACAAACGGCAATATAGAATCAAAGCCAATCAACTGCTGTCTCTGCACTGAAGTGTTCATGAAAACAACTAATTTTGAGACTCACATGAATAAAGCACATGGTGTGAAATCTGTGCCGGTCTATTGGTGTAGAGTGTGTGCGGCGGTTTTTGACAGTTTGTCAGAATTGGAGACTCATTCGACACAAGAGTTGGGGGAGTTTGACAATTTGTGGATCTGTCAGTTTTGTGACAAAGAGTTTGATGGGCGAGAAGAGACGAGGAGACATTTGACAGAGCACTGGGACCAGATAGCGTATGACAACTGTTTCAGCCCGCATTTAGGGTTCAAGTGCAAATTCTGCTCAACTCTGTTTTGGAATGAGACAGACCGAGAAGCCCACCACGTCAAAGTGCATAGTCAAATGAATAAAAGTGATTTCTATAAttgtacactttgtggcgaagaTTTTGGAGACAAGTTGTTTTTCATCCACCACTATGAGAAACACGAGAGCGACATGTCCTACCTACTGAAATGTTGTGTTTGCTCCATCGTGCTGGATAATGTGGAAGACATGAGGGGCCACTTTGAAGAATATCATCCTGACGCTAAAAAGATATTCTGTTGCTTGGATGACTGTAAATACAGACCTTTCAGTCAGAGGAAATCATTCTATATACATTTAAAGACTTTCCACGACCCATCGTCTCGGCAACTACGGCCAGTGACGTGCGAGCTGTGCGGGATGGAATTCGCGAACTCCAAGTCTTGCTCCCTGCACGTGTCACGGGTGCATGGCCCGGGACGGTTCAAATGTACCCTGTGCGATGAGGTGCTGCACACCAACGATGAAAGAAAGATCCACTACTTGATCCGGCACCCGGGGCGCGCGCAGTTCCAGTGCGGCGTGTGCGACAAGTACTTCCAGTACAAATCCTCGCTCTACATACATAAACAGGAACATTCTCCGCACAAGAAGGATTACACTTGCGACTACTGTGGgaaaaacttcttgaaaaaagaTTCTTACCGCGAACACATAATGATCCACGAAGCGCCTCGCCACGCTTGCTCGTATTGTCCAATGCGGTTCGTCCAACGTTCCAACATGCTGCGACACGAGCGCAGGCACACGGGGGAGCGGCCTTATGCCTGCCAACATTGCCCTAGGACGTTTTCTGACAAAGGCGCCTTGAATTCACATATGAGAACACACATAAAAACAACGTCGTTCGCGTGCGTTTACTGCGGACAGACTTTCGTGCAGAAATCCAAACTCACTTATCATATTCGAAAGCACACAGGAGAGAATTTGGAAACCTGTTCCATTTGTTCGAAGACATTTACCAGCGCGTGTTCTCTGCGGGAGCACATGATGGTGCATCAAAAACAGAAGATGAAGAAGACACTGAAATGCCCTCTTTGTAAAAAGATGTACTCTATCGAGCGCGACATGATGCGACACATGAGGACTGCCCACACGGGCAACCAGTTCAAATGCCCGCTCTGTCGCAAGACGGTCAGCTCGCCTAGCTCCTTGCGGGAGCATGTGCTGACTCACAGCCGAGTCAACACTTACCGGTGCAAGATGTGCCCTAAATCGTACCACGTAAAGAAGTCAATCCTCAAGCACGTAGAAACGCGACACGGTATGAAGCCGCCTCTCAGCGAGAAAATACACTACTACCAACTCGACCCTAAGGACTGTCAACTGGGCTTAGACGACGAAGTCTTAGAACGAATCTTCACAAAGCTCAGACCACCGCAAAGAATCCCAGAAGCCATTATTGGAGACTTTGTCAATTTCAACAACGATTTCCAGCAAGATGAAAGTGATCACAATCCTATACAAAGTGAGAATGAAGAAGGaaaactcatagaaaatacTATCCAAGTGAAATTGGAGCcagttgatgatgatgaggtgCCTCCGCCTCCTCCAGACTTTGTAAATGTGAAGATAGAAAATATGGAGGAGGATCAGGGATCTGATGCGGAAATGTCTTGA
Protein Sequence: MSSDDSEDEPLSVLAAKKSDNCGVKSHSVSKTGGSLKLKIKKENILIPPVNPGDLLPAIVERPTDVWLYLNDFNLTGPYTCLLCSEWFINRNRIVIHYVIDHKKDYCGICRYLVPNRETWQEHQKFHTPWKCSQCTQRFPTQLMLREHFSDAHNLVHCRFCYLRLPNNDEYYGHLLQKHSVTNTSSINEDCLWDFECKGDQKFTCLLCSKSVDVGKQFADHFMSFHHFTLKCFMFFIAGIDLPFKVKGAELSPEFVDTQLKAYSTFGYVDFIKSLKFKEESVTVTEEIPITVDCQPELKELSESFEDTEDLKLCEEIRGYRGVQDFDVTLVEVITMQKYYIDYVNATLNDINSNEMPLSSEIMYTNGNIESKPINCCLCTEVFMKTTNFETHMNKAHGVKSVPVYWCRVCAAVFDSLSELETHSTQELGEFDNLWICQFCDKEFDGREETRRHLTEHWDQIAYDNCFSPHLGFKCKFCSTLFWNETDREAHHVKVHSQMNKSDFYNCTLCGEDFGDKLFFIHHYEKHESDMSYLLKCCVCSIVLDNVEDMRGHFEEYHPDAKKIFCCLDDCKYRPFSQRKSFYIHLKTFHDPSSRQLRPVTCELCGMEFANSKSCSLHVSRVHGPGRFKCTLCDEVLHTNDERKIHYLIRHPGRAQFQCGVCDKYFQYKSSLYIHKQEHSPHKKDYTCDYCGKNFLKKDSYREHIMIHEAPRHACSYCPMRFVQRSNMLRHERRHTGERPYACQHCPRTFSDKGALNSHMRTHIKTTSFACVYCGQTFVQKSKLTYHIRKHTGENLETCSICSKTFTSACSLREHMMVHQKQKMKKTLKCPLCKKMYSIERDMMRHMRTAHTGNQFKCPLCRKTVSSPSSLREHVLTHSRVNTYRCKMCPKSYHVKKSILKHVETRHGMKPPLSEKIHYYQLDPKDCQLGLDDEVLERIFTKLRPPQRIPEAIIGDFVNFNNDFQQDESDHNPIQSENEEGKLIENTIQVKLEPVDDDEVPPPPPDFVNVKIENMEEDQGSDAEMS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00826093;
90% Identity: iTF_00826093;
80% Identity: -