Hpun032333.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hypomecis punctinalis
Gene Symbol
-
Assembly
GCA_949316475.1
Location
OX438814.1:12476323-12495482[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.00012 0.013 17.3 0.1 3 23 137 157 136 157 0.97
2 17 1.2e-06 0.00013 23.6 1.1 1 23 163 185 163 185 0.99
3 17 6.8e-06 0.00074 21.2 2.7 1 23 191 213 191 213 0.99
4 17 4.5e-06 0.00049 21.8 2.6 1 23 228 250 228 250 0.98
5 17 6.2e-05 0.0067 18.2 3.1 1 23 265 287 265 287 0.98
6 17 4.3e-07 4.7e-05 25.0 1.5 1 23 302 324 302 324 0.99
7 17 0.00019 0.021 16.6 2.8 1 23 330 352 330 352 0.98
8 17 1.3e-05 0.0015 20.2 2.1 1 23 358 380 358 380 0.99
9 17 0.044 4.8 9.2 1.8 1 23 387 409 387 409 0.98
10 17 7.3e-07 8e-05 24.2 2.3 1 23 415 437 415 437 0.99
11 17 0.31 34 6.5 1.1 1 23 444 466 444 466 0.98
12 17 3e-06 0.00032 22.3 1.5 1 23 472 494 472 494 0.99
13 17 0.0028 0.3 13.0 0.5 1 23 501 523 501 523 0.99
14 17 3.3e-06 0.00036 22.2 1.9 1 23 529 551 529 551 0.98
15 17 0.0024 0.26 13.2 0.3 1 20 557 576 557 579 0.93
16 17 4.6e-05 0.0051 18.6 1.4 2 23 586 607 585 607 0.96
17 17 4.2e-06 0.00046 21.8 1.4 1 23 613 636 613 636 0.97

Sequence Information

Coding Sequence
ATGTTTGAACAACAAATCAAAGCTGAACCGATGAGTTTTTACTCGTCGCACCAGCATGTACATAGCGGCCCCCCAACCATAGTCCGGTCGGATTCCTCTCATCCTATCATCAACATGAATCCGCACCATCCATCACTCTCCCACGCGCCGCACCAAGAAGACTCGAAGGACAGCTTAGTACATCAACAAGTACAACACCAGGATCTCATGGAACAACATCAACAACAGGAAATGCATCAACAACAGGATGACGAACTGAGCTTTAAGGGAATGGAAGATGAAGGCGTTGATATGGATATGGATGGCAGACAGTGTTCACAGGGTATGGGAGTTGACATGGGATCAGTTCAAACTAAAATGGAAATACCAAACGGCGGACCAAACACACCTCGTTCAAAACCTCAAGCCTGCAAGGTTTGCGGCAAAGTCCTTTCGTCCGCTTCATCATATTACGTCCACATGAAGCTTCATTCGGGAAACAAGCCTTTCCAATGCTCAGTTTGCGACGCAGCTTTCTGCCGCAAGCCGTACTTGGAAGTACATATGCGCACGCACACAGGCGAAAGGCCTTTCCAATGTGATTTGTGCCTAAAGCGCTTCACACAAAAATCCAGCCTTAATACACACAAACGCGTGCACACAGATGAGCACATGCGCGCGTTGTTGGTGAAGGACCGGCCCTACAAGTGTGAGCTCTGTCAGATGCGGTTCACGCAGAGCTCCAGCCTCAACCGACACAAGAAAATACATACGGAGGAGCACAGACGAGCCCTGTTAGAGAAAGTGCGGCCGTACCAGTGCCACATCTGTTTTATGCGCTTCACTCAGAAGTCCAGCCTGGGCCGCCATGGGAAAATACACACTGAGGAGCACATCCAATCGCTGATCAACAAAGTGCGCCCCTATCAGTGCGACATCTGTGACAAGCGGTTCACGCAGAAGTCCAGCCTTGGCACTCATAAACGTATACACACCGGGGAGCGCCCGTTCCAGTGCACCGTCTGCCTCAAGTCCTTCACGCAGAAGTGCGCGCTCAATTTGCACGAAAAGATACATACGGGCGAGCGGCCGTATCAGTGCGACGCGTGTCTGAAGCGCTTCACGCAGAAGTCCAGCCTCAATATTCATAAGAGGACGCACACAGTCCAGGGCAGACCGTTCCAGTGCCTGTCGTGCCCCGCCGCCTTCACCTGCAAGCAATACCTGGAGATTCACACGCGCACCCACACCGGCGAGCGGCCGTATCAGTGCGACATCTGCCTCAAGCGCTTCACGCAGAAATCCAGTCTCAACATCCACAAGCGGACGCACTCAGTGCAGGGCCGGCCGTTCCAGTGCCTGGCGTGCCCGGCCGCCTTCACCTGCAAGCAGTACCTGGAGATCCACAACCGCACGCACACCGGCGAGCGCCCCTACCAGTGCGACGTCTGCCTCAAGAGATTCGCGCAAAAGTCTACCCTCAACATACACAAACGAACGCACACAGTGCAAGGGCGGCCGTACCAGTGTGCGGAGTGCCCCGCCGCGTTCACTTGCAAGCCGTACCTGGAGATTCACACGCGCACGCACACCGGGGAACGGCCCTTCGAGTGCGATGTCTGTTACAAGCGCTTTACGCAGAAATCCACGCTCAACATCCACAAACGAATACACACCGGTGAACGACCTTATGCTTGTGATATTTGTCAGAAGCGTTTTGCAGTGAAAAGTTACGTCACAGCTCACAGATGGTCTCACGTTGCGGACAAGCCGTTGAACTGCGACCGGTGTTCGATGACATTCACATCTAAGTCGCAGTTTGCGCTTCACATCCGCACGCACTCTACGGGCCCGTGCTACGAGTGCAGCGTCTGCGGACGGACCTTCGTGCGGGACAGCTATCTAATACGACATCACAACCGCGTGCACCGGGAGATGAGTCACAGCCTGTCTGCGAACAGCATTGGAAACATCAATAGTGTCGCCACCAACACCAACTCCAACAACGGGAACTACGACTCGCCCGGCGTCTGTGACTTGAGTTTCGTGCCGATGGTGAACCGCTACATGACGTCCCAGGGCACGCAGGTGTCGATGCAGGACTCGCAGAGCAAGATGTCCGCCATGTCGCCGCAGTCCATCGCCTCTATTTCTTCACCTCCTCCTCCGCATACCCCAACGCCCCAGCCCCAGATGTCGGGTCAGATGCATCTTGCAGACTGA
Protein Sequence
MFEQQIKAEPMSFYSSHQHVHSGPPTIVRSDSSHPIINMNPHHPSLSHAPHQEDSKDSLVHQQVQHQDLMEQHQQQEMHQQQDDELSFKGMEDEGVDMDMDGRQCSQGMGVDMGSVQTKMEIPNGGPNTPRSKPQACKVCGKVLSSASSYYVHMKLHSGNKPFQCSVCDAAFCRKPYLEVHMRTHTGERPFQCDLCLKRFTQKSSLNTHKRVHTDEHMRALLVKDRPYKCELCQMRFTQSSSLNRHKKIHTEEHRRALLEKVRPYQCHICFMRFTQKSSLGRHGKIHTEEHIQSLINKVRPYQCDICDKRFTQKSSLGTHKRIHTGERPFQCTVCLKSFTQKCALNLHEKIHTGERPYQCDACLKRFTQKSSLNIHKRTHTVQGRPFQCLSCPAAFTCKQYLEIHTRTHTGERPYQCDICLKRFTQKSSLNIHKRTHSVQGRPFQCLACPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIHKRTHTVQGRPYQCAECPAAFTCKPYLEIHTRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCDRCSMTFTSKSQFALHIRTHSTGPCYECSVCGRTFVRDSYLIRHHNRVHREMSHSLSANSIGNINSVATNTNSNNGNYDSPGVCDLSFVPMVNRYMTSQGTQVSMQDSQSKMSAMSPQSIASISSPPPPHTPTPQPQMSGQMHLAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01246112;
90% Identity
iTF_00649330;
80% Identity
-