Hpun005660.1
Basic Information
- Insect
- Hypomecis punctinalis
- Gene Symbol
- -
- Assembly
- GCA_949316475.1
- Location
- OX438796.1:22870379-22873931[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-09 2.8e-07 31.5 0.0 4 37 43 76 40 82 0.93
Sequence Information
- Coding Sequence
- ATGCCCTTACgagtacgacgcccggacggcgCGCGGCGTCCGTACCACTACAAAAATGTGTGCAACGTGCGTGaaagGTCGCGAAAATATGTCCGATCCAGTTTACGGGCATCCTGGTCTGAAGTTGACCTGAAAGAGGCCAtgcaaaaagttcgtcaaaaaGAAATGGGTGTTAATGAAGCTGCTCGAACGTACAATATTCCTTCCAGAACACTTAGAAGACATATTTTGGCTGGAACATTGAAGGTCTCACTTGGAAGAAAACCTATTTTTACCCAAGAACAAGAAAAAAAGTTGGTCGCTCACATAAAGCAACTTGAAAATGTCGGTTTTGCTCCTGATCGGAAGGACGTTAAAGAAATGGCTTACCAATTAGCCCTCACGCTTAACATCAAACATGATTTCTCAGATAGGTGTGAAAAGGCTGGTGACGTTTGGTTTAACGGATTTTTGCAAAGGAACCCCGAGCTGAGCCAGCGAAAATCCGAAGGTATATCTCTTGCTAGAGCATACGGTGTTAATCGTTTGGATGTCCAGGATTTTTTTACATTGCTGGCCGAAATTTACAATGAAAATGATCTTATCTCACATCCAGAGAAGATATTTATCATGGACGAGACTAGTATCCaagttaacaataaagttacAAAAGTTATTGCAACCAAAGGCGCTAAGGACGTGTACACCTTGACAAGCAGTGAAAAAGGAGAAAATGTTACAGTTATAGCATGTTGCAATGCGGTAGGAAACTTTCTTCCACCTGTTTTGGTCTACAAAGGCACATACAGTGAGCCTCAATTTTCGGAAGATTTGCCACCAGGATCAAAAGTTTTTATGAACAAAAAATCATCCTTTATAAACACtgatctttttatgaaatggtTTGAGGAGATTTTTTTGGCAGCAAAAGGCCCAGGAAAAGCATTATTGATCATGGATGGGCACAGTTCTCACAGCAATAACATCAAGTTATTGGAAGTGGCTAAAGCTAATGATgtaaatttattatgttttcccAGTCACACTACATATGCAATGCAACCGCTGGACAAAGCTTTCTTCAGACCTTTCAAAGTTTATTTCGAGCAAGAAGCCAAATCATTGATGATCATGAATAAAGACAAGAAGCTTACTAGGTACGATGTATCCAAACTTATTGGCAAAGCTTGGGGTAAAGCAGCAATTGTATCAAATGGAGTTTCTGCTCTAAAATCTTGTGGGATATACCCTTACGACCCAAGTGCTGTACCTACCTGA
- Protein Sequence
- MPLRVRRPDGARRPYHYKNVCNVRERSRKYVRSSLRASWSEVDLKEAMQKVRQKEMGVNEAARTYNIPSRTLRRHILAGTLKVSLGRKPIFTQEQEKKLVAHIKQLENVGFAPDRKDVKEMAYQLALTLNIKHDFSDRCEKAGDVWFNGFLQRNPELSQRKSEGISLARAYGVNRLDVQDFFTLLAEIYNENDLISHPEKIFIMDETSIQVNNKVTKVIATKGAKDVYTLTSSEKGENVTVIACCNAVGNFLPPVLVYKGTYSEPQFSEDLPPGSKVFMNKKSSFINTDLFMKWFEEIFLAAKGPGKALLIMDGHSSHSNNIKLLEVAKANDVNLLCFPSHTTYAMQPLDKAFFRPFKVYFEQEAKSLMIMNKDKKLTRYDVSKLIGKAWGKAAIVSNGVSALKSCGIYPYDPSAVPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00147236;
- 90% Identity
- iTF_00826883;
- 80% Identity
- -