Hpun011982.1
Basic Information
- Insect
- Hypomecis punctinalis
- Gene Symbol
- clz9
- Assembly
- GCA_949316475.1
- Location
- OX438800.1:17293307-17295664[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-10 1.3e-07 32.5 0.0 3 39 27 64 25 68 0.90 2 2 1.5 3.7e+02 2.3 0.1 23 37 689 703 689 708 0.83
Sequence Information
- Coding Sequence
- atggttcGTGAATACAAGAGAACGTATCGGCACGTAAGACTTGGAAAAACATTCTTACCTTATGTGTCTTATACCACAGAAGACCTAGAAAATTCTGTGCGTGAAGTGAGAGAAGGAGACAGTTCAGTCCGACAAGCAGCAACCAAATATAATATACCCAAAAGCACACTTGCCCGTAAATGTAAGAAAGACACGATTTATGAAAGTGCAGGTCACCCTACTTTATTTAATGCTAATGAAGAGAATGCCTTTCTGTCATATTGCGAAGTATTAGGCGAGTGGGGTTTTCCATTAGATGCTTTCGATTTAAGAGTCTTAGCACAGAAATACTTAAACAGAATTGGGAGGACCGTTCACATCCTTAAAGATAATCTTCCAGGGCGTGACTGGGCTCTGAGTTTCATGAAACGACATAAAAATAGATTATCTCACAAATTTGCGACTAACATTTCTACTGAGAGAGCAAAGGTGTCACCTGAAACAATTGATGCCTTTTTTGAGAATTATATAACCACTATTTCAGGAGTTCCtcctgaaaacataataaattttGATGAAACTAATCTTTGTGATGATCCTGGAGCTAagaagtatgtattcaaaagaGGCACAAAGTACCCGGAAAGAGTCTTAAATAATTCGAAGACGGCAGTGAGCTTAATGTTTACCGGAACGGCAGATGGCCAAATGTTACCCATATACGTTGTGTACAAAGCAGAACGCGTATGGCAGCCATGGATAGAGGGCGGACCTCCCGACACTAGGTACAATAGGTCAAAATCCGGCTGGTTTGACATGACATGCTTTGAAGATTGGTTCGAAACAGTAATTGTTccattcgcaaaaaaaaaaactggaaaaaaagtaattattggcGATAATTTATCGTCGCatttttcagagaaaattcTAGAATCTTGCGAGTCACTAAACATTTCATTCGTCTGCTTGCCGTCCAAGTCCACACACTTGATGCAACCGTTAGATGTCGCCTTTTATGGACCGTTAAAGAAATACTGGAAGAACATTCTAACAAACTGGAAAACGACAGCAGATGgtagaaaatataaaacaatggCAAAGTCTTGTTTTCCAAAGCTTCTAGCTCAATTATGTGATTTAATGATTGAGAAAAACGTGATATCAGCCAATTTAAAAGCGGGTTTTGAAAAGAGCGGTCTATTCCCTGTAAACCCTGAAAGACCGAAATCAAGACTACCAAGGGCACTGGTTACAGCTGCAGAAGTTAACCTAGCTACTTCTGAAGTTGTGATTGATATATTACAAGACATGAGAGGCTTTAAGGACACTGCTCCAAGCAAAAGAAGGAAGCGGTGCGATGTAGAACCAGGGAAAAGCATATGTGCAAAAGATTTAACTCCAAAACCAACAACGAGCACTAAAGGCAAAGGACAAGGAAAAAAAACCAAAACTcatgtaaacaaaaaaattacaacgtCATCTCAGAATATCAACAAAAGTAGGAATCCAACAAAAAAGAGACTGAACAAAGCTCAACATGATTTAGACGAATCAACCAGTGTGTCTGATAATATGAGCCAGCACAGTGATTCTGATTTGATGGATTTAGATTTGAGAAAAGAGTATGGCAGTGATGATACCAACTGTTCTGAAGAACAAGCTTTTTCGATATCCTATTTTGAAAATAGAGTTCTATCAGCAGAGCCCGAACCAGGCCCTAGTGGAGAATCATCACGACGTCGTGCAGTGAAACCAAGACCAGAGCCTTGTGAGAATACATTGCCAGACTATGAAGAGGAGTTAATATTAGGTTCTAATGAAAAGGCAGCACGTAGTCGTAATGAGGCGTCAATGGCAAGCCCGAACGAAGAGGAGCTAGCACAAAAGCCAGGGTATGGCTCTAACCTGGAGTCAGTACAACACCATAGTGGTCAGCTAGCTCAGAACTGTGAGGAAGAGATAATAGCATGTCCACTAGCACAAGGCTCTAATGAGCAGCCAGCACCAGGCCCAATTAATCAGCTAGAACCAGAAAATTATGAGGAGGTAGCAGGttattcaaatgaaaatttaCCACCAGATTCTAATATTTATAACGTAAATGATACGGTCTTAGTGAGGTACTACATTAAAAAGTCTTGGAAATATTATGTTGGCGTGAtagaacattttgaaaactatTCTTACACCATTTCATTCTACAAAACTGTACGGCAAAATGATTCAGACATAATACTTATGAAACCTAAAAGAGTCGACCGAGATATTTTACCAGAAGTTTCATTGGTGAAacatattaatataaaacaaatttcATCCAAACCTGAAAAATATTTGGTTGAAAATGAAGATGACAagatttattttgattgttaa
- Protein Sequence
- MVREYKRTYRHVRLGKTFLPYVSYTTEDLENSVREVREGDSSVRQAATKYNIPKSTLARKCKKDTIYESAGHPTLFNANEENAFLSYCEVLGEWGFPLDAFDLRVLAQKYLNRIGRTVHILKDNLPGRDWALSFMKRHKNRLSHKFATNISTERAKVSPETIDAFFENYITTISGVPPENIINFDETNLCDDPGAKKYVFKRGTKYPERVLNNSKTAVSLMFTGTADGQMLPIYVVYKAERVWQPWIEGGPPDTRYNRSKSGWFDMTCFEDWFETVIVPFAKKKTGKKVIIGDNLSSHFSEKILESCESLNISFVCLPSKSTHLMQPLDVAFYGPLKKYWKNILTNWKTTADGRKYKTMAKSCFPKLLAQLCDLMIEKNVISANLKAGFEKSGLFPVNPERPKSRLPRALVTAAEVNLATSEVVIDILQDMRGFKDTAPSKRRKRCDVEPGKSICAKDLTPKPTTSTKGKGQGKKTKTHVNKKITTSSQNINKSRNPTKKRLNKAQHDLDESTSVSDNMSQHSDSDLMDLDLRKEYGSDDTNCSEEQAFSISYFENRVLSAEPEPGPSGESSRRRAVKPRPEPCENTLPDYEEELILGSNEKAARSRNEASMASPNEEELAQKPGYGSNLESVQHHSGQLAQNCEEEIIACPLAQGSNEQPAPGPINQLEPENYEEVAGYSNENLPPDSNIYNVNDTVLVRYYIKKSWKYYVGVIEHFENYSYTISFYKTVRQNDSDIILMKPKRVDRDILPEVSLVKHINIKQISSKPEKYLVENEDDKIYFDC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01342158;
- 90% Identity
- iTF_00634272;
- 80% Identity
- -