Hato012154.1
Basic Information
- Insect
- Hypomecis atomaria
- Gene Symbol
- iec1
- Assembly
- GCA_964007245.1
- Location
- OZ023286.1:23334506-23353690[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0066 0.6 11.8 0.7 2 22 497 517 496 520 0.89 2 12 0.002 0.18 13.5 3.4 1 23 534 557 534 557 0.97 3 12 0.029 2.6 9.8 1.4 3 22 564 583 562 586 0.88 4 12 8.9 8.1e+02 2.0 1.0 2 23 607 631 606 631 0.83 5 12 0.031 2.8 9.7 0.0 2 21 637 656 636 657 0.95 6 12 2e-06 0.00018 23.0 0.8 1 23 714 735 714 735 0.98 7 12 9.9e-05 0.009 17.6 2.2 1 23 741 764 741 764 0.96 8 12 0.96 87 5.0 3.0 2 21 785 804 784 805 0.93 9 12 0.41 37 6.2 0.8 1 23 814 838 814 838 0.97 10 12 0.018 1.7 10.4 5.8 1 21 846 866 846 868 0.94 11 12 0.0019 0.17 13.5 2.4 1 21 874 894 874 899 0.93 12 12 0.0011 0.098 14.3 4.4 1 23 905 928 905 928 0.97
Sequence Information
- Coding Sequence
- ATGCTGTCCCCTCGAGAAGATGACGACGATGACACCCACTTGTGCATCAAATGCAACACCACCATTGTTGGCTTGGATAACTACGTTAAACACAGAAAAGACCGATGCGCAAAAACCAAGACTAACGAAAACAAACCAGATCTTCCCCCCATCGAGTCGCTAGACCCTGCCTATAGCTTAGGAGCTGATGTTTTCTTCCAATCTTTAGAATTGCAAAGCAGCGTGAAGAAAACATCTTTGTCGAGACTGACTCCACCCATACCTATCTCAAAAGCCAGCATAGATAGAAAGAGCTCTTTAGCCATTGCAACTACCTCTCGAGACATCCCTCGGATGAGTCCTCTTGAAACCAATCTGAGAGGAGAGGACTGGATAGGAGGCCATACACTAAGAATAAGTGGCAATGAAGATAATCAGACGAAGCTCATAAACGCCGTGGCTAGCATCAGTGGTGCTGCTAAAAAAGAGACGAGTGCATCTTACACGATAGGCTACAACGACTTCAAAGGCGATGATGAAAGTGACGAATCTGAGGTTTCAGACGAAGATGACGAAGAAGAACATGCAACTGGTGGAAAGTGGAAACCGCCTTCAAATTACACTGGAGGCAAATGGCAGCCTGATTTCCCGGAACATGAGTGGGATGATCAAGAACCTACAGCTACGTGGAAATCACTTCTTCCCGAAGTAGATCGTGACGAGGATTATGACGCTCCGCCACCAGGACACACTAAAGGTAAATGGGTCCCAGGAGCGAACGAAAAGACCCAAATAATGCAAACAACTATACAGTCAAAAGGATCTGTCCAGTATTGGTGTGGTCCTTGCAACAGACGACTTGGCTCTCGGGCTATTTACGATAAGCATCTAAGATCAAGCTTGCACCTCAAAAAAGTTTTGCCCGAGCATGAACTAGAATTCTCTGGACACTTGGAGCCGATAAAAATAGGAGAAAAACGCATAACAAGACCCTCCAAGTTTGTAAATGATGGCATTTATTCTCAAGTCGAAAGAAAAAAGAGGCAGAAAAAAGATGTTAAATTAAACATCAAAATAGGCATTAAAAAACGAAAACGTAGAGCTACTTTCGTTCACTGCGCCGGCTGCAATTCTCGAGTCAGAGAATATCTGATGGGGAAACATCTTATATCCCATTATCACTTCAGAAAAGCAGCTGGAGTGACGAATTCTGTGTACCAACAACTAATTCTGGACAATATTGAGGCGATCGTACACCAGTCTCCCTTTCAGTGCAGCCCTTGTAAATTTTATACCAACTTGCTACCAAACTTCATGCAGCACTGGTATTCAGATGAACATGAATGGAAAGTAGCATTTATAGCTGGAAATTTCTGGTGTTCCTTCTGTAAATTTGAGTGTGGATCTTCTCAAGAAATGCTGCAGCACATGTCCAGCTCTGATCATGGTGAAGTAGTTGCTGTCATAAATAGATCAATGCCGATCATCATTCGAAAAAAGACTGTCTTGAAGTGTGAAACCTGTTCCGAAATATTCCGATACAACATAGAGCTAAAAAGACATAGCCAAAAAACTGGTCATCCCTTGGCATACACCGCGACAGATACATATCAGGAGCTCCACAAATGCCAGTATTGTAAAGCCAAGTTTAAGACTTCGCTAACACTTGCAGCCCATTTGAAATCGAGACACAAGCATAAGGCTCATTTATGCTTGGTCTGCTCAAAGACCTTTGATTCTTCTGAAGAAGCTAAGCGTCACCGTCAGTCGTCTGAACATAGAATCAATCGGAAGGAAATGCTGATGAAGCAGGGTGTTATAACGAAGGATTTACGGAAAAAATGCCCTTACTGTCCTGGCGAAGTCATGCTCAAGAATCTGCTAGTTCTGAAGGACCATATTCGGACATTTCATCCAGATGTTAAGAAAACGTGTCCTAAATGTGGAATGGAGTTCATCCTTTCGCAAGAAGTGACCAGCCACATTCGCGCCAAAGCGTGCAAGTTCCAAGAAACCGCTGTGCCCTTAGAGCATTGGAGCTGCAGCCAATGCCTCTTCAGCACTAACTCTCAGGCCGAATGCTACTTCCACGAAGTCTTGCACGAGCCTCCACTGACCGAAATCAAAAAAATTGGCGATGTGGAAAAAGTGGTACAGAAGTATACCTGTCCGATTTGTCCGAAGAGCTTCAGAAAGGCTTCCTTGAGGCAGCATTTGAGGCAGCACACGTTCGAAAGGCCTTTCGTCTGTTCTATCTGCAAAGCTAACTTCACCAGGCAGACTAGCTTGACGAATCATGTGAGACATGACCATGGAGACGGCTCGCAGAAAGTGGCCAAAACTGCAACAACTGTAGCAGGGGGTGAAAAATGCCGCTGCGAAAAGTGCTTGCAAGTTTTTCCCGACAAgGCTACGAAATCCCGCCATATTTGCAGCGACACTAGCGCCACAGCAAGTACCCACAAGTGTCATATTGATGAATGCTCCTTCGTGGCAGCTAACCCCGGTCGCCTTGCTAGACACGAAAAAAGCCACGGCATCGTTTCAGCAAAACGGCACAAATGCCCGCAGTGCCCATTTCGTACCGACCAAGCGAGCCATTTGAAGAGGCACCTGCAATGTCACAAAGGTGACAAGCCTTACTCATGTCCACACTGCGATTTCACCTGTGGAAGCCTTGAAAATCTCCGGAAACACGTTTTGCGCAGTGGTCGTCACAGAGACGTGTTCCTGTACCAGTGCAAGCATTGTGACCACAAGACCAACATGGCCTCAGATTTGCGGAAACATTTGCTCAGAGAACACAGCGACCAATACAACGTGAAAACTGCTTCGGAGGCAGCCAAAACGCATTTGATGCAAATTGCTGagactgaaaataaataa
- Protein Sequence
- MLSPREDDDDDTHLCIKCNTTIVGLDNYVKHRKDRCAKTKTNENKPDLPPIESLDPAYSLGADVFFQSLELQSSVKKTSLSRLTPPIPISKASIDRKSSLAIATTSRDIPRMSPLETNLRGEDWIGGHTLRISGNEDNQTKLINAVASISGAAKKETSASYTIGYNDFKGDDESDESEVSDEDDEEEHATGGKWKPPSNYTGGKWQPDFPEHEWDDQEPTATWKSLLPEVDRDEDYDAPPPGHTKGKWVPGANEKTQIMQTTIQSKGSVQYWCGPCNRRLGSRAIYDKHLRSSLHLKKVLPEHELEFSGHLEPIKIGEKRITRPSKFVNDGIYSQVERKKRQKKDVKLNIKIGIKKRKRRATFVHCAGCNSRVREYLMGKHLISHYHFRKAAGVTNSVYQQLILDNIEAIVHQSPFQCSPCKFYTNLLPNFMQHWYSDEHEWKVAFIAGNFWCSFCKFECGSSQEMLQHMSSSDHGEVVAVINRSMPIIIRKKTVLKCETCSEIFRYNIELKRHSQKTGHPLAYTATDTYQELHKCQYCKAKFKTSLTLAAHLKSRHKHKAHLCLVCSKTFDSSEEAKRHRQSSEHRINRKEMLMKQGVITKDLRKKCPYCPGEVMLKNLLVLKDHIRTFHPDVKKTCPKCGMEFILSQEVTSHIRAKACKFQETAVPLEHWSCSQCLFSTNSQAECYFHEVLHEPPLTEIKKIGDVEKVVQKYTCPICPKSFRKASLRQHLRQHTFERPFVCSICKANFTRQTSLTNHVRHDHGDGSQKVAKTATTVAGGEKCRCEKCLQVFPDKATKSRHICSDTSATASTHKCHIDECSFVAANPGRLARHEKSHGIVSAKRHKCPQCPFRTDQASHLKRHLQCHKGDKPYSCPHCDFTCGSLENLRKHVLRSGRHRDVFLYQCKHCDHKTNMASDLRKHLLREHSDQYNVKTASEAAKTHLMQIAETENK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00927058;
- 90% Identity
- iTF_00827502; iTF_00667005;
- 80% Identity
- -