Basic Information

Insect: Hypomecis atomaria
Gene Symbol: drm
Assembly: GCA_964007245.1
Location: OZ023307.1:10435830-10444679[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.8e-07 1.7e-05 26.2 0.3 1 23 38 61 38 61 0.98

2 18 4e-06 0.00037 22.0 1.7 1 23 68 90 68 90 0.97

3 18 1.2 1.1e+02 4.8 0.3 12 23 96 108 95 108 0.93

4 18 7.2e-06 0.00065 21.2 1.6 1 23 115 137 115 137 0.97

5 18 1.2 1.1e+02 4.8 0.3 12 23 143 155 142 155 0.93

6 18 7.2e-06 0.00065 21.2 1.6 1 23 162 184 162 184 0.97

7 18 2.3 2.1e+02 3.8 0.6 12 23 190 202 189 202 0.93

8 18 1.8e-05 0.0017 19.9 0.3 1 21 209 229 209 230 0.95

9 18 7.2e-06 0.00065 21.2 1.6 1 23 249 271 249 271 0.97

10 18 2.3 2.1e+02 3.8 0.6 12 23 277 289 276 289 0.93

11 18 7.2e-06 0.00065 21.2 1.6 1 23 296 318 296 318 0.97

12 18 2.3 2.1e+02 3.8 0.6 12 23 324 336 323 336 0.93

13 18 7.2e-06 0.00065 21.2 1.6 1 23 343 365 343 365 0.97

14 18 2.3 2.1e+02 3.8 0.6 12 23 371 383 370 383 0.93

15 18 7.2e-06 0.00065 21.2 1.6 1 23 390 412 390 412 0.97

16 18 2.3 2.1e+02 3.8 0.6 12 23 418 430 417 430 0.93

17 18 2.8e-06 0.00026 22.5 1.1 1 23 437 459 437 459 0.97

18 18 0.0001 0.0094 17.5 2.2 1 23 465 488 465 488 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.8e-07	1.7e-05	26.2	0.3	1	23	38	61	38	61	0.98
2	18	4e-06	0.00037	22.0	1.7	1	23	68	90	68	90	0.97
3	18	1.2	1.1e+02	4.8	0.3	12	23	96	108	95	108	0.93
4	18	7.2e-06	0.00065	21.2	1.6	1	23	115	137	115	137	0.97
5	18	1.2	1.1e+02	4.8	0.3	12	23	143	155	142	155	0.93
6	18	7.2e-06	0.00065	21.2	1.6	1	23	162	184	162	184	0.97
7	18	2.3	2.1e+02	3.8	0.6	12	23	190	202	189	202	0.93
8	18	1.8e-05	0.0017	19.9	0.3	1	21	209	229	209	230	0.95
9	18	7.2e-06	0.00065	21.2	1.6	1	23	249	271	249	271	0.97
10	18	2.3	2.1e+02	3.8	0.6	12	23	277	289	276	289	0.93
11	18	7.2e-06	0.00065	21.2	1.6	1	23	296	318	296	318	0.97
12	18	2.3	2.1e+02	3.8	0.6	12	23	324	336	323	336	0.93
13	18	7.2e-06	0.00065	21.2	1.6	1	23	343	365	343	365	0.97
14	18	2.3	2.1e+02	3.8	0.6	12	23	371	383	370	383	0.93
15	18	7.2e-06	0.00065	21.2	1.6	1	23	390	412	390	412	0.97
16	18	2.3	2.1e+02	3.8	0.6	12	23	418	430	417	430	0.93
17	18	2.8e-06	0.00026	22.5	1.1	1	23	437	459	437	459	0.97
18	18	0.0001	0.0094	17.5	2.2	1	23	465	488	465	488	0.92

Sequence Information

Coding Sequence: ATGGTCAGGGTTGGACGAGCGGGTCCAAATTGGCACTACAGTTGTGTTTGGTCTTTGCAGTGCAAGGCCCTGCTCGACAACCACGCGTGGGTGCACACGGGCACGAAGCGCTTCCAATGCCCGCAATGTGAGAAGAGCTTCACGCAGCCGCCGAACCTCCTGCTGCACCAGCGGCGCGTCCACTCCGTCACGCCGGTCAGCTACGACTGCGGGATCTGCGGGAACAGCTTCTCGTCGCATAGCAACATGAGGCGGCACATGCTCCAACATGAGGCGGCACATGCTCGTAAGTACAACCTCCTGGTGCACCAGCGGCGCGTCCACTCCGTCACGCCGGTCAGCTACGACTGCGGGGTCTGCGGGAACAGCTTCTCGTCGCATAGCAACATGAGGCGGCACATGCTCCAACATGAGGCGGCACATGCTCGTAAGTACAACCTCCTGGTGCACCAGCGGCGCGTCCACTCCGTCACGCCGGTCAGCTACGACTGCGGGGTCTGCGGGAACAGCTTCTCGTCGCATAGCAACATGAGGCGGCACATGCTCCAACATGAGGCGGCACATGCTCGTAAGTACAACCTCCTGCTGCACCAGCGGCGCGTCCACTCCGTCACGCCGGTCAGCTACGACTGCGGGGTCTGCGGGAACAGCTTCTCGTCGCATAGCAACATGAGGCGGCACATGCTCGTAAGTACAACCTCCTTTCTGCACCAGCGGCGCGTCCACTCCGTCACGCCGGTCAGCTACGACTGCGGGGTCTGCGGGAACAGCTTCTCGTCGCATAGCAACATGAGGCGGCACATGCTCCAACATGAGGCGGCACATGCTCGTAAGTACAACCTCCTGCTGCACCAGCGGCGCGTCCACTCCGTCACGCCGGTCAGCTACGACTGCGGGGTCTGCGGGAACAGCTTCTCGTCGCATAGCAACATGAGGCGGCACATGCTCCAACATGAGGCGGCACATGCTCGTAAGTACAACCTCCTGCTGCACCAGCGGCGCGTCCACTCCGTCACGCCGGTCAGCTACGACTGCGGGGTCTGCGGGAACAGCTTCTCGTCGCATAGCAACATGAGGCGGCACATGCTCCAACATGAGGCGGCACATGCTCGTAAGTACAACCTCCTGCTGCACCAGCGGCGCGTCCACTCCGTCACGCCGGTCAGCTACGACTGCGGGGTCTGCGGGAACAGCTTCTCGTCGCATAGCAACATGAGGCGGCACATGCTCCAACATGAGGCGGCACATGCTCGTAAGTACAACCTCCTGCTGCACCAGCGGCGCGTCCACTCCGTCACGCCGGTCAGCTACGACTGCGGGGTCTGCGGGAACAGCTTCTCGTCGCATAGCAACATGAGGCGGCACATGCTCATCCACACGGGGTTGAAGCCGTACAAATGCGAAACGTGCGGGAAATGTTTCACAGCCGAGCGCGAGCTGCGCGCGCACGTGGACCACGTGCACCTGAACAAACCCTGGCCGCGCCGCCCCGGGAGACGACTGAAGCCGTGA
Protein Sequence: MVRVGRAGPNWHYSCVWSLQCKALLDNHAWVHTGTKRFQCPQCEKSFTQPPNLLLHQRRVHSVTPVSYDCGICGNSFSSHSNMRRHMLQHEAAHARKYNLLVHQRRVHSVTPVSYDCGVCGNSFSSHSNMRRHMLQHEAAHARKYNLLVHQRRVHSVTPVSYDCGVCGNSFSSHSNMRRHMLQHEAAHARKYNLLLHQRRVHSVTPVSYDCGVCGNSFSSHSNMRRHMLVSTTSFLHQRRVHSVTPVSYDCGVCGNSFSSHSNMRRHMLQHEAAHARKYNLLLHQRRVHSVTPVSYDCGVCGNSFSSHSNMRRHMLQHEAAHARKYNLLLHQRRVHSVTPVSYDCGVCGNSFSSHSNMRRHMLQHEAAHARKYNLLLHQRRVHSVTPVSYDCGVCGNSFSSHSNMRRHMLQHEAAHARKYNLLLHQRRVHSVTPVSYDCGVCGNSFSSHSNMRRHMLIHTGLKPYKCETCGKCFTAERELRAHVDHVHLNKPWPRRPGRRLKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00826004; iTF_00825996; iTF_00826056;
90% Identity: iTF_00826004;
80% Identity: iTF_00826004;