Basic Information

Insect: Hypomecis atomaria
Gene Symbol: Paxbp1
Assembly: GCA_964007245.1
Location: OZ023282.1:20759173-20790796[+]

Transcription Factor Domain

TF Family: GCFC
Domain: GCFC domain
PFAM: PF07842
TF Group: Unclassified Structure
Description: This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.3e-16 9e-12 46.4 0.3 2 190 513 680 512 689 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.3e-16	9e-12	46.4	0.3	2	190	513	680	512	689	0.81

Sequence Information

Coding Sequence: ATGTCTCTATTTCGGAAACCCAAGAAAATTCAAAGACGCATGTTCTGCGCCGATGATGATGAGGACGGCGATCCGGAACCTCCGCCGCCGCCTCTCATTAGCCAGAGGCGGGAGAAGAAAGAGAACAACGTTGTCAAAGCTCCCAAACTTCTGAGCTTTGCAGATGAAGAGGAAGATTGTGAAGAATTCAAAGTAAAGAAATCGTCTCAAAGCAAGAGACTTTCCAAACGTCGtgagaaagaaaagaaaaaagtacCCGATGGTGATAATAACAGAAATGACAAAGACAATAATATACACGAGGACAACAACGCAAACCACGCTGACACACCAGAGGACAAGCCGAAATCCAAAAAGAAAGTGACCCTGGAGGGTTTGATACTATCGGGGCGGGAGGCGCTGGCGGCGGACGGCGGGGGGGACGTGTCGGACAGCGGGGGGGAAGGGGAGGAGGAAGAGGAAGACAGCAGGGGGTTTCACCAGTACCGGGCCGAGTCGGTCAGGGCTGCGCTGGCCGTCGCGCCCGGCCATATCCCGGATGCGGCCCTCATCCACGCCGCGAGAAAAACCAGACAGCAGGCGCGCGAGCTGGGCGACTTCGTACCTGTCCCTTCGGAGGCTCCGGCCGGCGCGCGACTAGCGCGGGAGGGCGACGGTGACGACTCGGCTGATGATGAAGACGGCCGGATCATCGTCCGAGGACTGGACCTGCCCAGCGATAAGCCGAAACGTGGCACGGCAGCGGTACAGTCGGATGAAGAAATAAACAGTGAGGCAGAAGAATGGGAAGAACAGCAGATTAAGAAGGCCATGCCGGCTCTTCCTGACATTGGCGACGGGATCGAGGTGAACCCGTTCAGCgtggcgccgccgccgccgcggctGGAGGACGCGCCCGCGCACCTGCGGCCCCtcgcggccgccgcgcgcgcgcccaCCTCCGCGCCCGACCTCGTCGAGGCGCTGCGACACAGACTGGACGAGCTACAGACGGCGCGCGCTCACACCACGTACAAAAAGGAAGAGCTGCAGACGAGGTTGCTGAACGCGGCGCGAGTGCGCGAGTCTCGAAGCGCGCGCACGGCCGCGCTCGACGCCGCGTACAAGCGGGCGCAGGCCGCGCGCGGGTACCTCACCGACCTCATCGAGTGTCTGGACGAGAAGATGCCGGCGCTGGAGGCGCTGGAGAGCCGCGCGCTGGCGCTGCACCGGCGGCGCTGCTCGTTCCTGGTGGAGCGGCGCCGCGCCGACGTGCGCGATCAGGCGCAGGACGTCATGGCGGGAGTGGGTCGtccgggcgcggcgcgggcgccggACTCGGAGGAGAAAGTGCGGCGCACGGCGGAGCGCGAGggccggcggcgcgcgcggcggctgCGGCGGGAGGCGGGCGGCACCAGGCACCACCGCGACGGAGACTCCAGCGACGACGACCTGCCGCCCGCCGAGGCCAGCCACTACCGCGACGAGCGAGAGTCGAtccgcgcggcggcggcggcgctgtTTGCGGACGCGCTGCCGGCGTGGCGGTCGCTGCGCGGCGTGTGCGCGCGGCTGGCGgcgtggcggcggcgcgcgcccgcCTCCTACGTGGACGCgcacgcgcccgccgccgcgccccgcCTGCTCGCGCCCTACGTGCGCCACCAGttgATTCTATGGAACCCGCTGGCTGATGAAGACAATGAGGATTACGAAAAGATGGATTGGTACAAATGGCTGATGATGTACGGCGTGTCCGAGTCGCGGTCGTCGGACGACTCGTCGGGCTCGGACGGCGATCAGGACCCCGCCCCCGCGGTCGACGAGCGCGCCACTCGGGATGACCCGGACTTGCTGCTGGTGCCCACCATGCTCAACAAGGTAGTGCTGCCTAAGATTACAGAGCTAGTGGAGCACGCGTGGGACCCGATGTGCGTGCGCGCGTGCGTGCGGCTGCGGCACGCGGTGGTGCGGCTGGCCGGCGTGCCGCACGCGTCGCGCCCGCTGCGCCGACTCGCCGCTGCGGTGCGCGCGCGGCTCGATGCCGCACTCAGCCACGACGTGTTCCTGCCAGCGCTTCCCCCGCAGGTGATGGAGGGCAGCGGGGGCGCGTTCTGGCGGCGGTGCGCGGGGGGCGGCGTGCGGCTGCTGCGGGGCGCGCTGGCGCtcaccgcgccgccgccgctgctgCGGGCCGACGCGGTCGTCACGCAGCTCCTCGTCACATCGTTCTGGCGGCGGTGCGCGGGGGGCGGCGTGCGGCTGCTGCGGGGCGCGCTGGCGCtcaccgcgccgccgccgctgctgCGGGCCGACGCGGTCGTCACGCAGCTCCTCGTCACATCGTTCTGGCGGCGGTGCGCGGGGGGCGGCGTGCGGCTGCTGCGGGGCGCGCTGGCGCtcaccgcgccgccgccgctgctgCGGGCCGACGCGGTCGTCACGCAGCTCCTCGTCACATCGTTCTGGCGGCGGTGCGCGGGGGGCGGCGTGCGGCTGCTGCGGGGCGCGCTGGCGCtcaccgcgccgccgccgctgctgCGGGCCGACGCGGTCGTCACGCAGCTCCTCGTCACATCGTTCTGGCGGCGGTGCGCGGGGGGCGGCGTGCGGCTGCTGCGGGGCGCGCTGGCGCtcaccgcgccgccgccgctgctgCGGGCCGACGCGGTCGTCACGCAGCTCCTCGTCACATCGTTCTGGCGGCGGTGCGCGGGGGGCGGCGTGCGGCTGCTGCGGGGCGCGCTGGCGCtcaccgcgccgccgccgctgctgCGGGCCGACGCGGTCGTCACGCAGCTCCTCGTCACATCGTTCTGGCGGCGGTGCGCGGGGGGCGGCGTGCGGCTGCTGCGGGGCGCGCTGGCGCtcaccgcgccgccgccgctgctgCGGGCCGACGCGGTCGTCACGCAGCTCCTCGAGCGCCTGAGctgcgcggcgggcgcggcgccgGGCCCGTGGATGGcgcaggcggcggcggcgctcgCGGAGACTCTCCCGCGCTCGGGCGAGCTGCGCGCGGCCGCGCTGCGTCGCCTCGCCGCGCTCGCGACACTCGCGCTGTCGCGCCTCGACTCGCAAAACCCTTTACATCTGAAAGCACTGGAGCAAGCGAGAGCGGTGATAGCCGAAGCCAAGGCGATGGAGTGA
Protein Sequence: MSLFRKPKKIQRRMFCADDDEDGDPEPPPPPLISQRREKKENNVVKAPKLLSFADEEEDCEEFKVKKSSQSKRLSKRREKEKKKVPDGDNNRNDKDNNIHEDNNANHADTPEDKPKSKKKVTLEGLILSGREALAADGGGDVSDSGGEGEEEEEDSRGFHQYRAESVRAALAVAPGHIPDAALIHAARKTRQQARELGDFVPVPSEAPAGARLAREGDGDDSADDEDGRIIVRGLDLPSDKPKRGTAAVQSDEEINSEAEEWEEQQIKKAMPALPDIGDGIEVNPFSVAPPPPRLEDAPAHLRPLAAAARAPTSAPDLVEALRHRLDELQTARAHTTYKKEELQTRLLNAARVRESRSARTAALDAAYKRAQAARGYLTDLIECLDEKMPALEALESRALALHRRRCSFLVERRRADVRDQAQDVMAGVGRPGAARAPDSEEKVRRTAEREGRRRARRLRREAGGTRHHRDGDSSDDDLPPAEASHYRDERESIRAAAAALFADALPAWRSLRGVCARLAAWRRRAPASYVDAHAPAAAPRLLAPYVRHQLILWNPLADEDNEDYEKMDWYKWLMMYGVSESRSSDDSSGSDGDQDPAPAVDERATRDDPDLLLVPTMLNKVVLPKITELVEHAWDPMCVRACVRLRHAVVRLAGVPHASRPLRRLAAAVRARLDAALSHDVFLPALPPQVMEGSGGAFWRRCAGGGVRLLRGALALTAPPPLLRADAVVTQLLVTSFWRRCAGGGVRLLRGALALTAPPPLLRADAVVTQLLVTSFWRRCAGGGVRLLRGALALTAPPPLLRADAVVTQLLVTSFWRRCAGGGVRLLRGALALTAPPPLLRADAVVTQLLVTSFWRRCAGGGVRLLRGALALTAPPPLLRADAVVTQLLVTSFWRRCAGGGVRLLRGALALTAPPPLLRADAVVTQLLVTSFWRRCAGGGVRLLRGALALTAPPPLLRADAVVTQLLERLSCAAGAAPGPWMAQAAAALAETLPRSGELRAAALRRLAALATLALSRLDSQNPLHLKALEQARAVIAEAKAME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00826984;
90% Identity: -
80% Identity: -