Hato021091.2
Basic Information
- Insect
- Hypomecis atomaria
- Gene Symbol
- Smarcc1
- Assembly
- GCA_964007245.1
- Location
- OZ023294.1:10686328-10702695[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.1e-14 1.1e-10 42.6 0.1 3 44 527 568 525 570 0.95
Sequence Information
- Coding Sequence
- ATGAAAGTGTTCATGGACATGAAGCCGGGCGGTGCGCTGTGCACGGCCCTCGCCACCATGTTCCGCTTCAAGTCGGAGCAGCGGTGGCGCAAGTTCGACTTCCAGGTCGGTAAGAATCCCTCGCGCAAAGATCTCAACGTGCAAATGATGCTCGAAATCGAGTCTTCGCTTCTCAGCGCTGAACTAATCCGAACGCCCTGCGTTTACATCCGACCGGAGGTGGACAAGGCCACCGCTAACAAAGTGAAGGACATCGTGAGCAACCATCAGGGAGAGATTTGCGAGGACGAAGAAGACGCGACGCACATAATCTACCCAACAGTGGACCCGCTGGAAGAAGAGTACGCGCGGCCCGTCTACCGTCGCGGGCCGTACTCGCTGGTGCACTGGTACTACTTGCCCGACAGCCACGACACCTGGGCGCAGGCCGATCTGCCGGTGGATGGTCCGGAGAATGTGAACTGGGATTGCAACCGATCGGAGCCGTGGCGCGTGACTGCCACGTGGGCTCTCGATCTTCCGCAGTACAACGAGTGGATGAACGAGGAGGACTACGAAGTCGACCATCACGGGAAGAAGAAGGTTCACAAACTGCGTCTGTCGGTGGACGACCTGATCCCTGGCGGTGAGCCCTCCAGCAAGAGTAAGAAGGGCAGCAAGAGGAAGCGCTCTCCCTCGCCGCCGCCGCAGAAGAATAAGAGGAAGAGcCGCGTCGCTAAGAGGCGCGAGAACGACGCTGAAGACGAAGAGGATAACGCGTCCCGAGATAACACAGACGCTGCTCCCACGCCTGAGGCCGTAGACAAACCAGTCGAGACCCCGGTGTCGACCCCGGCGCCGGAGCCGGCCCCGGCGGCGCCGCCGGCTGCCGAAGCGCCGTcgacgcccgcgccgccgctcgACGCGCACGACGACTCGCAGGGCAAGCACAGCGACTCCAACACGCAGGAAATGATTCCAAAAGACGAGTTGGAAGACAACGTGACGGACCAGACGCACCACATCGTGGTGCCGTCCTACTCGGCGTGGTTCGACTATAACGCCATACACACCATAGAGAAGCGAGCCATGCCCGAGTTCTTCAACGGGAAGAATAAATCTAAGACTCCTGAGATATACCTCGCGTACAGGAACTTCATGATCGACACGTACCGCTTGAACCCTACGGAGTACTTGACGAGTACGGCGAGTCGACGGAACCTCGCCGGTGATGTGTGCGCTATAATGAGAGTCCATGGCTTCCTTGAGCAATGGGGGCTCATCAACTATCAGCTGGAGGCGGAGTCGCGGCCGACGGCGATGGGTCCGCCGCCGACGTCGCACTTCCACGTACTCTCCGACACACCGTCGGGCCTGCAGCCGCTACTGGCGCGCCCCGCGCAACCCAGGCCAGCGGAGAACGTGCCCAAACTAGAGCCGGGTCTGCCGAACGGCGCCGAGGCGGGCGGAGCTGCCGCGGGCGCGCCGGCCGCCCCCGGCGCCGCCGCCCCGCCCCTCGTGAAGCACGAGCCCGGCCTCGAGCTCGGCCTCAACCCCGGCCTCAAACTCGACCAGTACCGGGGTGGGTGCCGCGGCCGCGAGTGGTCGGAGCAAGAAACCCTCCTCCTCCTGGAAGGGCTGGAGCTGCACCGAGACGACTGGAACCGCGTCGCCGCGCACGTCGGCACTCGCACACACGACGAGTGCATCCTGCACTTCTTGCGGCTGCCCATAGAAGAGCCTTACCTCACTGATCCTGCCGCAGTTGGCGCCGTGATCGCGAGTGGTCGGAACAGGAAACCCTACTTCTCCTGGAAGCGTTCGAGCTGTATTGAGATGATTGGAACCCACGACGAGTGTATCCTGCACTACTTACGGCTGCCCATCGAGGAGCCTTACCTCACCGACCCCGCCGCAGGTATAGCTTCGTAA
- Protein Sequence
- MKVFMDMKPGGALCTALATMFRFKSEQRWRKFDFQVGKNPSRKDLNVQMMLEIESSLLSAELIRTPCVYIRPEVDKATANKVKDIVSNHQGEICEDEEDATHIIYPTVDPLEEEYARPVYRRGPYSLVHWYYLPDSHDTWAQADLPVDGPENVNWDCNRSEPWRVTATWALDLPQYNEWMNEEDYEVDHHGKKKVHKLRLSVDDLIPGGEPSSKSKKGSKRKRSPSPPPQKNKRKSRVAKRRENDAEDEEDNASRDNTDAAPTPEAVDKPVETPVSTPAPEPAPAAPPAAEAPSTPAPPLDAHDDSQGKHSDSNTQEMIPKDELEDNVTDQTHHIVVPSYSAWFDYNAIHTIEKRAMPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTASRRNLAGDVCAIMRVHGFLEQWGLINYQLEAESRPTAMGPPPTSHFHVLSDTPSGLQPLLARPAQPRPAENVPKLEPGLPNGAEAGGAAAGAPAAPGAAAPPLVKHEPGLELGLNPGLKLDQYRGGCRGREWSEQETLLLLEGLELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLTDPAAVGAVIASGRNRKPYFSWKRSSCIEMIGTHDECILHYLRLPIEEPYLTDPAAGIAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00790217;
- 90% Identity
- -
- 80% Identity
- -