Hchr019332.1
Basic Information
- Insect
- Hemistola chrysoprasaria
- Gene Symbol
- Smarcc1
- Assembly
- GCA_947063395.1
- Location
- OX346727.1:7017177-7031001[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3 2.1e+03 -0.4 0.1 33 44 132 143 130 145 0.88 2 2 1.6e-14 2.6e-11 44.1 0.1 3 44 543 584 541 586 0.95
Sequence Information
- Coding Sequence
- ATGCGAGAACTCTCAATGCGATTCTCTCTTGTGTACACATTATCATTAAAACTCGCAATACAGGCTGTAACCGAGCAGAGTTTAGAGATGCTACCACAATGGGACAGATTATCAAGAAAAGTGTCGctggcatttttttttatgataAATCCGTCGCGCAAGGACCTCAACGTGCAGATGATGTTGGAGATAGAATCGTCTCTACTCGGCGCTGAGTTGATCCGAACGCCCTGCGTTTACATAAGGCCGGAGGTTGACAAGGCAACGGCTAATAAGGTCAAGGATATCATTAGCAACCACCAGGGTGAATTATGTGAGGACGAAGAAGACGCCACGCACATAATCTATCCATCAGTGGACCCTCTAGAGGAGGAGTACGCCCGGCCCGTGTTCCGTCGCGGGAACCATTGTCTCGTGCACTGGTACTACTTGCCCGACAGCCACGACACGTGGGCCCAAGCTGATCTACCGGTGGATGTCCCGGAGACAGTGAGCTGGGACTGCGGTCGCGGAGAGCCGTGGCGAGTGACGGCCGCGTGGGCGCTCGACCTCACGCAGTACAACGAGTGGATGAACGAGGAGGACTATGAGGTCGACGCACACGGCAAGAAGAAGGTCCACAAACTAAGGCTGTCGGTAGATGATCTGATCCCTGAGACTTCAAGCAAGAGTAAGAAGGGCAAGAGAAAGAGATCGCCTTCCCCTCCGCCACAGAAGAATAAGAGAAAAAGTCGCGTAACAAAGCGTCGGGACAACGATGCGGAAGACGAAGAGGACAATGCATCGAGGGACAACACAGATACCGCACCCACGCCTGAGTCTGTTGAGAAACCTGCCGAACCGGTGGTAGCGGGGCCGGCAGCGGAGCCCCCGGCGCCCGCGGAGGCCCCGAGTACCCCGGCGCCGCATGTCGACACTCACGACGACTCGCAGGGGAAACATAGCGACTCCAACACACAGGAGATGATCCCCAAGGACGAGTTAGAAGACAACGTAACGGATCAAACGCACCACATCGTCGTGCCGTCGTACTCTGCCTGGTTCGACTACAACTCCATACATACCATAGAGAAGCGAGCCATGCCAGAGTTCTTCAATGCGAAGAACAAGTCCAAGACACCGGAGATGTACCTGGCTTATAGAAACTTCATGATCGACACGTACAGACTGAATCCAACCGAGTATCTGACGAGCACGGCGTGTCGCCGCAACCTGGCCGGAGATGTATGCGCCGTCATGAGGGTGCATGGCTTCCTGGAACAATGGGGACTTATCAACTATCAATTGGAAGCGGAGTCCCGTCCCACGGCGATGGGTCCCCCGCCGACGTCCCACTTCCACGTGCTCTCCGACACCCCGTCCGGCCTGCAGCCCGCGCTCGCCAGGCCGCAACACCCACGACCTGCGGAGAACGTACCTAAAGTGGAGCCAGGGTTGCCTAACGGCGCGGACCCGGGCGCGGTCCCCGGCGccccgccccccgccgcccccgcgccccccgcccccgcccccgccgccgccgccgccctcCCCCCCGCCGTCAAGCAGGAGCCCCCGCCCGCGCTCGACCTGGGGAACAACCCTGGACTCAAGCTCGATCAGTATCGTGGCGGTTGTCGCGGCCGCGAATGGTCGGAGCAGGAGACATTGTTGCTCCTAGAAGCGTTAGAACTCCACCGAGACGATTGGAACCGCGTGGCGGCGCACGTCGGCACTCGCACACACGACGAGTGTATCCTGCACTTCCTGCGACTGCCTATAGAGGAGCCGTACCTTAACGATCCTGCGGCAGGTGGAGTATTGGGCCCTTTAGCCTATCAACCGATACCTTTCAGCAAGACTGGCAACCCTGTAATGAGTACAGTCGCTTTCCTCGCGTCGGTCGTCGACCCGCGCATCGCTTCCAAGGCTACTAGGGCTGCCATGGAGGAGTTTGCTGCTATTAAGTTTGTAATCTCACCAATAGATGGCTCTAGTTGTAAATTAAACATCGCATAA
- Protein Sequence
- MRELSMRFSLVYTLSLKLAIQAVTEQSLEMLPQWDRLSRKVSLAFFFMINPSRKDLNVQMMLEIESSLLGAELIRTPCVYIRPEVDKATANKVKDIISNHQGELCEDEEDATHIIYPSVDPLEEEYARPVFRRGNHCLVHWYYLPDSHDTWAQADLPVDVPETVSWDCGRGEPWRVTAAWALDLTQYNEWMNEEDYEVDAHGKKKVHKLRLSVDDLIPETSSKSKKGKRKRSPSPPPQKNKRKSRVTKRRDNDAEDEEDNASRDNTDTAPTPESVEKPAEPVVAGPAAEPPAPAEAPSTPAPHVDTHDDSQGKHSDSNTQEMIPKDELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRAMPEFFNAKNKSKTPEMYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAVMRVHGFLEQWGLINYQLEAESRPTAMGPPPTSHFHVLSDTPSGLQPALARPQHPRPAENVPKVEPGLPNGADPGAVPGAPPPAAPAPPAPAPAAAAALPPAVKQEPPPALDLGNNPGLKLDQYRGGCRGREWSEQETLLLLEALELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLNDPAAGGVLGPLAYQPIPFSKTGNPVMSTVAFLASVVDPRIASKATRAAMEEFAAIKFVISPIDGSSCKLNIA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00825689;
- 90% Identity
- -
- 80% Identity
- -