Hato003363.1
Basic Information
- Insect
- Hypomecis atomaria
- Gene Symbol
- lolal
- Assembly
- GCA_964007245.1
- Location
- OZ023280.1:12423937-12430181[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-15 7e-13 49.3 0.0 1 42 328 370 328 373 0.94
Sequence Information
- Coding Sequence
- ATGTCTCAGCAGTACAGCTTGCGGTGGAATAACCACCAGCCCAACTTCATATCGATGTTTACGACTTTACTCAACACTCAGACCCTAGTGGATGTAACCTTGGCAGCCGAGGGAAAGCACCTGCAGGCCCACAGAATGGTGCTGTCGGCTTGCAGTACTTATTTCCAGGCGTTGTTCGTGGAGAACCCCTCGCACCACCCCATTGTCATTCTGAAGGATGTGACCTTCGCAGACCTGCGTACTATGGTGGACTTCATGTACTATGGAGAAGTCAATGTGACAGAAGAGCAGTTGCCGCAGGTGCTGGAAACGGCGAAGACGCTCAAGATCAAGGGTCTGACGGAGATGCCCGAGTCGACACTGACCCGCGCGCAGGGCGGCGGAGCGCCAGGCGCAGACTTCGCGCCCCCCGCCGAGCCCGCCGACCCGCAGCGGATGTCTACACCTGCCACCTCGCCCACCAACAAACGGAGAAGACGAAGGAAAAGCTCGACTGGTTCGACATCCCTGAACATGGTGCCGGAAGAAGTCCGTGATGACAATCAAACCGTGGAATTGGTGCGCGACGGCATCACGCTCAGCAGCGTGCCGCAACGGCGACGCGACTTTCACGACGAGAGGCACCAGGAAGCATCCCAGCAGGCACCGGAAAACCAACACATGAACATGGATCCCTTAGGAGTAGAGAACCCGGCCAGCATAGCTCAAGGAGGGCAGTGGAGTATGATGGAGCACGCGTACCCGCGGTACTCGAGCGCGTGCGGGctggcgggcggcgcgggcggcgtgcAGCCCGATGCTGGCCTCTACATGAACAACATGACGCCGCACGTGGACGGCGAGCTCGGCGACTACGCGCTGGCCGCGGCCGCCGCCGTGGCGCACCCCAGCCCCGGGCCGTCGTGCGCCGCCGAGCCGCCGCCGCACCACGAGCCGCCGCACCAGCCGCAGCCCAAGCGCCGCCGCACCACCAACCCGCAGTCCGAGGAGAATTTCCAGCGCGCGCTCGAGGCCGTGCGCTTCGGCGGTATCGGGTTCTGCAAGGCGGCGCGCATGTTCGGCGTCAACAACAGGACGCTCTGGCTCGAGTACAAGAAGAAGGGCTACCCCAACAACCGGCCCAGCATCAAGAGCCGCATCAAGCGCGAGCACACCACGCCCCCTCCCGACCTGAAGGACGAGCCGCCGCCGGCCGACCACCAGATGGCGCTGCTATGCCCGCCGCACCCCGTCTCTGTCGGGTTCATCGAATCGCGGCCGCTCGACTTCCCGCTGCAAGGCATGCCGCACGGCTCGCCGCTCAACATTCTCGGCGTCAACTTCAACTCGATGCAATAG
- Protein Sequence
- MSQQYSLRWNNHQPNFISMFTTLLNTQTLVDVTLAAEGKHLQAHRMVLSACSTYFQALFVENPSHHPIVILKDVTFADLRTMVDFMYYGEVNVTEEQLPQVLETAKTLKIKGLTEMPESTLTRAQGGGAPGADFAPPAEPADPQRMSTPATSPTNKRRRRRKSSTGSTSLNMVPEEVRDDNQTVELVRDGITLSSVPQRRRDFHDERHQEASQQAPENQHMNMDPLGVENPASIAQGGQWSMMEHAYPRYSSACGLAGGAGGVQPDAGLYMNNMTPHVDGELGDYALAAAAAVAHPSPGPSCAAEPPPHHEPPHQPQPKRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHTTPPPDLKDEPPPADHQMALLCPPHPVSVGFIESRPLDFPLQGMPHGSPLNILGVNFNSMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00635310;
- 90% Identity
- iTF_00666633;
- 80% Identity
- iTF_00825920;