Hmis002080.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hypolimnas misippus
Gene Symbol
sip1
Assembly
GCA_008963455.1
Location
JBBEEQ010000003.1:460424-471064[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8e-59 1.3e-54 186.5 0.5 5 275 372 624 368 624 0.97

Sequence Information

Coding Sequence
atgtctgaCGACGAGGTTATTCGCTTTGAAATTACTGACTACGATTTGGACAATGAATTTAACCCTAATAGAAATCGAAGAGCTAAGAAAGAACAACAAATATATGGTGTCTGGGCGAAGGACAGTGATGAAGAAGATAATGAAGACAACATCAGACAGAGAACTCGTAAACCAAAAGACTTCTCAGCTCCAATTGGTTTTGTTGCGGGTGGTGTACAACAAGCTGGCAAAAAGAAGGAAGATAAAAAGAAAGAGTTATTAGAGAAGTCAGAAGCGTCAACATCAAAGCCAAAATTTCCAGACAGTTCTGATGAAGATGACCAAGCCTCGAATCCGGATGAAAGAGACACTGCAGGTATACGAAGAGCAGGGCAAGGCTTGAAAGGGGTCAACCTCGGAGGCAGTGTAGGAGCTTGGGAAAAACACACTAAAGGCATTGGTGCTAAGCTTTTGTTACAGATGGGTTACCAACCTGGTAAAGGTTTGGGTAAAGACCTGCAGGGTATATCGGCACCAGTCGAGGCTACGGTGAGGAAAGGTAGAGGGGCCATCGGAGCCTATGGACCGGAGAAAGCTGCGcaAAAAGCGAAAAAGGAGGAAGAACGTCGTCTGAAAGAGAAAGAGGATGCAGAGAAAGGGGCCAAGGAGAAGACATGTAACTGGAAGAAGTCACACAAGGGCCGCTACTTCTACAAGGATGCAGCGGATGTCATACAAGAGGGTAAACCCACCATGCACACTATTAGCAGTAACGAGCTATCTCGCGTGCCCGTAATCGACCTGACGGGGCGCGAGAAGAAAGTTCTCAGCGGCTACCACGCCCTGCGCGCCGCTGCGCCGCGCTTCGAGCACGAGCCCCGGCGGGAGTGCACGCGCTTCGCCGCCCCCGAGCTGTCTCACAACCTGCAGCTCATGGTGGACTGCTGCGAGCAGGATATCATCCAAAACGCTCGTGAACTGCAACAAGCGGAAGATGAAATAGTGGTTCTAGAACGTGATCTCGAGGAGTGCAGCACGAAGCTGAAGGAGGAAGATCAGATCATCGAGAAGGTGCAGGCGATCCTGTCTCGCGTGGAGAGACTGAACCAGCCGGACGTGTCACTCGAGACTGCTTTCGATGTGCTGTCGGATTTAAAGGAAACGTTCCCGCTGGAGTACGAGATGTTTGGCCTGGGCACTATCGGTGGTAATATAGTGAATCCCTTGTTCAGCGCCATGATGGCCAAGTGGAATCCTCTCCAGAACCCTGAACAGCCCGTTAGCAGCTTCGTCAAGTGGCGCCCGCTGTTGACTGATGAGTCGTATAACACGTTGCTGTGGCAACACTTTGTGCCTCATATTGCTACGGCTGCTGAGTCGTGGAACCCGCGCGCGCCGGCGCCCATGCTGGCGGCGCTGGAGGCGTGGCGCGCGGCGGCGCCGGCGTGGCTGCTGCGCGCGTGCGCCGCGCGCCACATCGCGCCGCGCCTGCTGGACGCCGTGCGCGCCTGGGACCCCACGCGCGACACGCTGCCCGTGCACCACTGGGTGCTGCCGTGGCACGGGCTGGCCGGCGCGGCGCTGGGCAGCGGCGTGTACCCGCTCATCCGCTCGCGGCTGGCGGCGGCGCTGGCGGCGTGGCACCCCGGCGACGCGTCGGCGCGCCCGCTGCTGGCCGCCTGGCGCGCCGCCTGGGGGCCCGCGCTGGCGCCGCTGCTGCAGCACCACGTGCTGCCGCGCCTCGAGCACTGCTTGCGGCAGGCGCCCGTCGAGCTGGTCGGCGGGGAGAACGCGGCGTGGCAGTGGTGCGTGCCGTGGCTGGAGCTGCTGGGCGCGGCGGCGCTGGGCGCGCtggcggcgcgcgcgctgctgccgcgctGGCTGGGCGCGCTGGCGGCGTGGCTCAACACGGCGCCGCCGCACGCCACCGTGCTCGCCTCCTACGCCGACTTCCGGAAAATGTTCCCCGAAGAAGTCCTCAAAGAGCCAGCGGTACGTGACGCTTTCAGAAAAGCTCTCGACATGATGAACAGAAGCACGGACATCGACACGATCGAACCACCCCCTCCCCCGCGGTTCACCCCCACGGAAACCAAGGAAACCTCCAAGATCGACATCCTGACCTCCATAGCACAACAGAAGAGCTTCTCGGAGCTTCTAGAGTCTAGATGTATAGAGAAGGGGATAACGTTTGTGCCAATAGTTGGGAAATTTAGGGAGGGGAGGCCCTTGTACAAGATAGGGGAGTTACAGTGTTATGTCATTCGTAATGTGattatgtattctgatgatggtGGCAGGACTTTCGCGCCGATTGGCTTGGATAGGTTGTTAAGTTTAGTGGAgtaa
Protein Sequence
MSDDEVIRFEITDYDLDNEFNPNRNRRAKKEQQIYGVWAKDSDEEDNEDNIRQRTRKPKDFSAPIGFVAGGVQQAGKKKEDKKKELLEKSEASTSKPKFPDSSDEDDQASNPDERDTAGIRRAGQGLKGVNLGGSVGAWEKHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEATVRKGRGAIGAYGPEKAAQKAKKEEERRLKEKEDAEKGAKEKTCNWKKSHKGRYFYKDAADVIQEGKPTMHTISSNELSRVPVIDLTGREKKVLSGYHALRAAAPRFEHEPRRECTRFAAPELSHNLQLMVDCCEQDIIQNARELQQAEDEIVVLERDLEECSTKLKEEDQIIEKVQAILSRVERLNQPDVSLETAFDVLSDLKETFPLEYEMFGLGTIGGNIVNPLFSAMMAKWNPLQNPEQPVSSFVKWRPLLTDESYNTLLWQHFVPHIATAAESWNPRAPAPMLAALEAWRAAAPAWLLRACAARHIAPRLLDAVRAWDPTRDTLPVHHWVLPWHGLAGAALGSGVYPLIRSRLAAALAAWHPGDASARPLLAAWRAAWGPALAPLLQHHVLPRLEHCLRQAPVELVGGENAAWQWCVPWLELLGAAALGALAARALLPRWLGALAAWLNTAPPHATVLASYADFRKMFPEEVLKEPAVRDAFRKALDMMNRSTDIDTIEPPPPPRFTPTETKETSKIDILTSIAQQKSFSELLESRCIEKGITFVPIVGKFREGRPLYKIGELQCYVIRNVIMYSDDGGRTFAPIGLDRLLSLVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00796529; iTF_00896824; iTF_01080730; iTF_01508078; iTF_00843550; iTF_01079071; iTF_01507231; iTF_00695615;
90% Identity
iTF_00843550;
80% Identity
-