Basic Information

Gene Symbol
zfy1
Assembly
GCA_003709505.1
Location
PKRV01000464.1:1048233-1049642[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.00033 0.02 15.4 0.0 3 23 155 175 153 175 0.97
2 11 3.3e-05 0.0021 18.5 4.4 1 23 181 203 181 204 0.95
3 11 0.0017 0.11 13.1 0.4 1 23 211 233 211 233 0.98
4 11 6.2e-06 0.00039 20.8 1.1 1 23 239 261 239 261 0.99
5 11 0.00012 0.0075 16.7 4.8 1 23 267 289 267 289 0.97
6 11 1.6e-06 0.0001 22.6 2.4 1 23 295 317 295 317 0.98
7 11 2.5e-06 0.00016 22.0 0.3 3 23 325 346 324 346 0.97
8 11 0.018 1.1 9.8 0.6 2 23 352 370 352 370 0.95
9 11 0.00012 0.0072 16.8 0.8 1 23 376 399 376 399 0.91
10 11 0.0077 0.48 11.0 1.1 1 23 405 429 405 430 0.95
11 11 2.4e-05 0.0015 18.9 4.9 1 23 436 459 436 459 0.97

Sequence Information

Coding Sequence
ATGGAAACAACAATTTGCCGCATTTGCCTCAACAGCACTGCATCGATTTCCATATTTGAGGAACAGCGAGATGTACAATATAGTACAAAGATAATGAAATGTGTCAGTGTGATGATTATGGAAGGTGATGGTTTACCAGATGCAATATGCACAAGCTGTGAATCTGAACTATGCATCGCAtacgaatttataaataagtgcGAAGCATCGGATAAGGCACTCCGGTGCATTAATATTACAGACCAAAATGACCTATCTAAACCCGAACTTAAATTGGAAATTATTAAGCAAGAAATATCTcaagatgataatgatgatcacTTTGAGAGTTTTCTATTAGAAGAGCACAAAAACTCGTATCTCTATGATGTTAAGAAacccagaaaaaaatatacgaaaactAAAAAATTTCAAGAGGCATTagataaacgaaaaaataaGTCTAAATCGGGACCTGTTATATGTGTTGTCTGCGGTTATGTAGCAGCCAGCCGCTCTGCCATGGAGAACCATATGAGAACCCACACTGGAGAGAAACCTTTCATATGCCACTATTGCAATGCTAGATTCAATCTTAAGGGCTCACTGAAAAGGCACATACTCACACaccacacagagagagagaggaaatttatttgtgaaacaTGTGGGAATAGCTTTTTAACTAAGAATAGTATCATAACACATATGAGGGTGCACACAGATGAGAGACCCTATGTTTGTTCTTATTGCTCTAAAGCATTTAGACAAATTGCTTCAATGATTCGCCACAAGCGTACACATACAGGAGAATGCCCCTATACATGTCTTACGTGTTTCAAAAAATTCAAAGACAAAAGCCATATGATGAGGCACCAGGTTGTCCACAGTAATGAGAAGAACTTCACTTGTCACCTGTGTAGTAAGTCTGTTAAAACCAAAAATGCCCTCAAAGCTCATATGCGGATTCATTCCAATGAGAAACACAACATATGTAGTTACTGCGGAATGACATTTTCTTTGAAAGGCAACCTCCAAGtacatataaaaagaatacacTCTGAGAAGTCTGGTGAGTGCACCgagtgtcaaaaaatatttccagatctAGAGTCACATATGCGCAAGCACACAGGAGAGAAACCGTTTGTATGTAAGTTGTGTGACCAAGGATTTGTAAGTAAGAGGAGTTTGTCCAACCACATGGTGTTTAGACATGAGAATGCATCAAAATTCAAATGCTCTATAGGGGAGTGTACAAAAACATTCCCTACAGCTATGATGTTAGAGTTTCATTTGTTAAAGCACCACACAAATCATACTCCATACATTTGTCATCACTGCTCAAAGGGCTTTTTCCGTACCAGTGATCTATCTCGTCACCTTAGAGTTAATCACCTGGAGACAATCAAAGTGCCTGGGAAAagttaa
Protein Sequence
METTICRICLNSTASISIFEEQRDVQYSTKIMKCVSVMIMEGDGLPDAICTSCESELCIAYEFINKCEASDKALRCINITDQNDLSKPELKLEIIKQEISQDDNDDHFESFLLEEHKNSYLYDVKKPRKKYTKTKKFQEALDKRKNKSKSGPVICVVCGYVAASRSAMENHMRTHTGEKPFICHYCNARFNLKGSLKRHILTHHTERERKFICETCGNSFLTKNSIITHMRVHTDERPYVCSYCSKAFRQIASMIRHKRTHTGECPYTCLTCFKKFKDKSHMMRHQVVHSNEKNFTCHLCSKSVKTKNALKAHMRIHSNEKHNICSYCGMTFSLKGNLQVHIKRIHSEKSGECTECQKIFPDLESHMRKHTGEKPFVCKLCDQGFVSKRSLSNHMVFRHENASKFKCSIGECTKTFPTAMMLEFHLLKHHTNHTPYICHHCSKGFFRTSDLSRHLRVNHLETIKVPGKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00157418;
90% Identity
iTF_00441781; iTF_01360923;
80% Identity
-