Hcun007106.1
Basic Information
- Insect
- Hyphantria cunea
- Gene Symbol
- lov
- Assembly
- GCA_003709505.1
- Location
- PKRV01000318.1:5057259-5064840[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.2e-19 9.7e-16 57.3 0.0 1 44 85 128 85 129 0.96
Sequence Information
- Coding Sequence
- ATGAACGGGGTGAAGTTCGACAAGTTGTGTACACATGGCCGCGAAAGGGTTGGACCGAGTTGCAAACTAATGTTTGCAATCGACTCGCCGCTGGCTCTGTTCCCCCCTGGCATGGAGCACAAGATGTACCCTATGATGGACGTGGACCATCGCCCAACACCACTAGATGCACAACTTTAcacaaatgttaaaaagaaatGGCGACCAAAGGGCCAGCATAGCGCACCGCGCGGTGGCCCCCCTAGATCTTGGACCAATGCTGAGCTTACAGAAGCATTACAACACGTGTGGAATAAGAAAATGACAACGAGCCAAGCGTCCCGAATCTTCGGCATCCCATATAATTCATTATTGATGTACGTACGCGGTAAATACGGAAAGAGCCTAAAATTAGAGCAGCTAAGGAAAGACTGTATCGGCGGTCCGCTAGATATGCTGAACCTCAACTCCGGCCATAATAATAACAACCAACCTTCAAGCAAACCTCACGAAAAAGACGATCATCATAATGCCAGCCAAAGACCTGCGAGTTCCGAGCCAGACATTGCCTCAAATCCAATGTTTAATCCATTCCAACAAGGGTTCTATCCAGAATTCCCTCCAGGGTTCCCGATGCCGCTCAACATGCTGCATCTCCTACCGCCTAATGATAAAGCGAGGGAACTATACCAGTCGATACCTATGGCTCTGGACGCTCTGTCAGGAACAACAAAAGAGGAAGATTGTAAGAGCGATAGGTCAAAGGAGAACTCTGCTGACGAAGAGGGAGAGACATATCGCGCGCCCTCACACGTAGCGCATCCGGCGGACAATCGTACGCTCCTGCATCACAACGGACAGGAGTAG
- Protein Sequence
- MNGVKFDKLCTHGRERVGPSCKLMFAIDSPLALFPPGMEHKMYPMMDVDHRPTPLDAQLYTNVKKKWRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIGGPLDMLNLNSGHNNNNQPSSKPHEKDDHHNASQRPASSEPDIASNPMFNPFQQGFYPEFPPGFPMPLNMLHLLPPNDKARELYQSIPMALDALSGTTKEEDCKSDRSKENSADEEGETYRAPSHVAHPADNRTLLHHNGQE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01377391;
- 90% Identity
- iTF_00157128; iTF_00441416; iTF_00345741; iTF_00706861; iTF_00822831; iTF_00794265; iTF_01502010; iTF_01360542;
- 80% Identity
- -