Basic Information

Insect: Hypercompe scribonia
Gene Symbol: -
Assembly: GCA_949316085.1
Location: OX438995.1:7185872-7188214[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0055 3 9.0 0.9 18 43 9 31 5 32 0.93

2 13 0.00093 0.51 11.4 0.0 18 43 68 90 61 91 0.85

3 13 5.1e-05 0.028 15.5 0.8 17 44 98 122 96 122 0.94

4 13 0.015 8.4 7.5 5.1 18 44 129 152 128 152 0.91

5 13 2.4e-05 0.013 16.5 3.3 14 43 156 182 152 183 0.89

6 13 0.0002 0.11 13.6 0.3 17 44 188 212 184 212 0.89

7 13 0.8 4.4e+02 2.1 0.7 18 34 220 233 214 243 0.73

8 13 0.0088 4.8 8.3 1.0 12 44 250 279 239 279 0.84

9 13 0.39 2.1e+02 3.0 0.7 15 43 302 327 294 328 0.85

10 13 1.1 6.1e+02 1.6 0.0 15 27 361 373 357 387 0.80

11 13 0.37 2e+02 3.1 4.3 15 43 407 432 403 433 0.88

12 13 0.41 2.3e+02 3.0 2.4 16 29 437 450 433 462 0.72

13 13 0.006 3.3 8.9 3.2 12 43 462 490 452 491 0.79

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0055	3	9.0	0.9	18	43	9	31	5	32	0.93
2	13	0.00093	0.51	11.4	0.0	18	43	68	90	61	91	0.85
3	13	5.1e-05	0.028	15.5	0.8	17	44	98	122	96	122	0.94
4	13	0.015	8.4	7.5	5.1	18	44	129	152	128	152	0.91
5	13	2.4e-05	0.013	16.5	3.3	14	43	156	182	152	183	0.89
6	13	0.0002	0.11	13.6	0.3	17	44	188	212	184	212	0.89
7	13	0.8	4.4e+02	2.1	0.7	18	34	220	233	214	243	0.73
8	13	0.0088	4.8	8.3	1.0	12	44	250	279	239	279	0.84
9	13	0.39	2.1e+02	3.0	0.7	15	43	302	327	294	328	0.85
10	13	1.1	6.1e+02	1.6	0.0	15	27	361	373	357	387	0.80
11	13	0.37	2e+02	3.1	4.3	15	43	407	432	403	433	0.88
12	13	0.41	2.3e+02	3.0	2.4	16	29	437	450	433	462	0.72
13	13	0.006	3.3	8.9	3.2	12	43	462	490	452	491	0.79

Sequence Information

Coding Sequence: ATGTATCACAATCAATTGGATTTTGTCTGCGATTACTGTTCCAGAACATTCACAAGAAAATATAACCTACAAACGCATATTGAGAACTGTCACATAAATTCAACTTCCCACTGCGATATTTGTGAACAAAGTTTCGGTAGTCCAGCAGGGTTACAACTCCATCTATCAAGAGGACACAACAACTATGCCCAACCGTTTCCAGAATGTGATATATGTGGAAGAATTTTTAcgagaaaacaaaatatcacGTCTCACATGATCACCGTGCATTTACAAGGATTAGGTGATGATATAAGATGTAAATTGTGCGATAAAAACTTCACTACAGAAAGAAATTTGAAGAGGCACATGAACCAACAACATAATCCCTACGCGGAATACCCTACGTGTTATTATTGTAACAAGACCTTCAAAGGGAAACACTCACTTATTTCTCATATCCACACAATTCATAATATCAGTGAAAAAGATGCGATAAAATGTCACTTGTGTGAGAAAGTATACACAAATacgagaaatttaaaaagacataTTGAAATGTTTCATGGCGAACGAGGCGAATTCAAATGTGATATATGCCCCAAAGTGTACACCTCAAATCAGAGTTTGAGAAGGCATCTCCGCACAACACACAGCACAGACAGTAACGAACAGTTTGCGTGCAACTTGTGCAGCAAAGTTATCATCGGAAGGGAAAACTATGAAAGCCACTTACAATACATACATCACTACGAAAACGAATCTAAAATTAgtgtaaatgaaattatatgCGAAACGTGTCACCAGACTTTCGAAGAAGAATCTCTATTACGACAACACATAAAGGAAAATCACCCGTTTAAAGTTTTTTACAAATACTGTAGGAATGTTTTATTAAGACAATACGGGTCTGAGTTTGTTAATAATGTGTACAATTGTGAATATTGTCAGCACACATTTCCTAGCGTGTACGAACTAAAAGATCATATGCGAATAAACCACGACACTGAATACTCTCTATCCACGTGTAACGTATGCTTTAacaaatattactgtaaagAAACGATGAATGCCCACAAAAAAGTGTGTCTACCCCCACCAAACGTGAATTCCTGCAGTCATTGCGACAAATTATTCACCGATATCTCTAGTTTAGAATTCCATACGAGAATATTTCACCCTCAAGCGCAGATTGCCGACTCCAATATATCTTCAACGAATATAGAAGACGATTTGCCAACGTCATTCAAATGCCCACATTGTAATCGGATGTATTATAGCGATCGATCGCTAAAACATCACATAAAGCTAAAACACACATCCGATGAACAAGTAGGCTGTGAGTTTTGTGGTAAAATTTGCAGCAATAAGTACTATTTAGCTTCACACATCAAAATAGTTCACAATAACGATTCTTGGTCTCGCTGTGAGTACTGCGATAAACAGTTCAAATCTAAAAGAAACATCAGGAGACACATTGAATACACACATCTAGGTATGCAAAGtgATGCGTGCAAGACCAAGGCAATTTTAAGCGAGCTTTGCACCACTGAAATGAGTGAGGAAGAGTCTGAGTTTTCTGGTTTCGGTTCTTTGCATCAGCTCCCGGAGAGCACAACGAgtgaattcaattttaaaatagaacctTTGATGGATGAAGATGATATTAAAAGGGAACCTTTGTCACCTTAA
Protein Sequence: MYHNQLDFVCDYCSRTFTRKYNLQTHIENCHINSTSHCDICEQSFGSPAGLQLHLSRGHNNYAQPFPECDICGRIFTRKQNITSHMITVHLQGLGDDIRCKLCDKNFTTERNLKRHMNQQHNPYAEYPTCYYCNKTFKGKHSLISHIHTIHNISEKDAIKCHLCEKVYTNTRNLKRHIEMFHGERGEFKCDICPKVYTSNQSLRRHLRTTHSTDSNEQFACNLCSKVIIGRENYESHLQYIHHYENESKISVNEIICETCHQTFEEESLLRQHIKENHPFKVFYKYCRNVLLRQYGSEFVNNVYNCEYCQHTFPSVYELKDHMRINHDTEYSLSTCNVCFNKYYCKETMNAHKKVCLPPPNVNSCSHCDKLFTDISSLEFHTRIFHPQAQIADSNISSTNIEDDLPTSFKCPHCNRMYYSDRSLKHHIKLKHTSDEQVGCEFCGKICSNKYYLASHIKIVHNNDSWSRCEYCDKQFKSKRNIRRHIEYTHLGMQSDACKTKAILSELCTTEMSEEESEFSGFGSLHQLPESTTSEFNFKIEPLMDEDDIKREPLSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00823589;
90% Identity: iTF_00823589;
80% Identity: iTF_00823589;