Hscr026924.1
Basic Information
- Insect
- Hypercompe scribonia
- Gene Symbol
- -
- Assembly
- GCA_949316085.1
- Location
- OX438988.1:1603174-1604121[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.5e-09 1.1e-06 29.2 0.0 1 36 18 53 18 60 0.91
Sequence Information
- Coding Sequence
- atgtttgtttttagaaTGTCCGGTTCACAATCAACCAAACGAAAAACCTGGGATGAAGAAAAAATGGGACAAGCTATAAAATTCGTCCGGGAAAAGAAAATGGGGTATTTGAAAGCGGCACAGCATTTTCAAGTGCCTAGGACAACTTTATTTCGTCTCTGCCAAAAAGATGAACAGTCTCCAGAAGTGGCAGCAGCTACTACATTAGGACGAAAAACTATCTTGGGCACCGAACTTGAACGTCAGCTAGTAGAATACATACTAATAATGGAGAGCAAGTTTCACGGTTTAACAAGAACTGATCTTCGCCGTATGGCGTTCATGCTAGCAAAGCGAAACAATTTGCAGAATCCCTTCGGTGAATCAGGTATGGCTGGAAAAAAGtggttaaagttatttttaaatcgtCATAAAGATAAACTTTCGATAAGAAGACCAACTGGTACATCATTTGCCAGAGCATTTGGATTTGATAAAGAAAAAGTGGAAGCCTTTTTCAACCTTCTTGAAGagctttacattaaaaataactatccaCCAAATCGTATTTACAACGTGGATGAATCAGGCCTCACAATAGTACAAAGTAAGATACCACAAATCATCGGCCACAAAGGTAAACGCCAGGTAGCTGCACTGACTTCAGCAGAAAGAGGATCTCTGATGACAATAGTTGTTTGCATGAATGCTACTGGTCATTTTGTGCCACCGTTCATTATTTTTCCCAGAAAAAATATGAGTGCTCAGCTAATGAGAGGCTGTCCTTCAGGATCAGTCGGAGTTGCACATCCATCAGGGTGGATACAAATAAACATCTTTACAAACTGGTTCAAGCACTTTATTCAACACACCAACCCGACTCCTGAATCGAGGGTTTTACTGATACTAGATGGACACTATAGTCATACTCACAATATCGATATAATAGATATTGCTAGGGGAAAATAA
- Protein Sequence
- MFVFRMSGSQSTKRKTWDEEKMGQAIKFVREKKMGYLKAAQHFQVPRTTLFRLCQKDEQSPEVAAATTLGRKTILGTELERQLVEYILIMESKFHGLTRTDLRRMAFMLAKRNNLQNPFGESGMAGKKWLKLFLNRHKDKLSIRRPTGTSFARAFGFDKEKVEAFFNLLEELYIKNNYPPNRIYNVDESGLTIVQSKIPQIIGHKGKRQVAALTSAERGSLMTIVVCMNATGHFVPPFIIFPRKNMSAQLMRGCPSGSVGVAHPSGWIQINIFTNWFKHFIQHTNPTPESRVLLILDGHYSHTHNIDIIDIARGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01360551; iTF_01360552; iTF_01043638; iTF_00423708; iTF_01451391; iTF_01203978; iTF_00420486; iTF_01303272;
- 90% Identity
- iTF_00420486;
- 80% Identity
- -