Hscr020170.2
Basic Information
- Insect
- Hypercompe scribonia
- Gene Symbol
- retn_1
- Assembly
- GCA_949316085.1
- Location
- OX438982.1:7570854-7583538[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-20 7.2e-17 62.6 0.0 12 89 58 133 53 133 0.95
Sequence Information
- Coding Sequence
- ATGAGCAGAGCATGTAGTCTCATTGAGCTGTTGTGTAGTTGCGGGGTGATCAGGTGGGGGACGCGGTGCAGTAAGCATCGCCACAATGTTGCACCGGATAAGGCCGGCCGCCGCTGTTTTAATGTCTCTCAGACGGAATTACGCTGGATTGTTCTCAACTTTACTGCTCCCTTCATGATTGATCGTTGTACACCAATCAATCGCTTGCCAATAATGGCTAAGTCTGTCTTGGACTTGTTTGAGCTGTACAACTTGGTGATTGCTCGCGGAGGTCTAGTGGAAGTTATCAACAAAAAATTATGGCAAGAAATAATTAAAGGTCTGAAACTGCCATCTTCTATCACATCTGCAGCATTTACACTTCGCACCCAatatatgaaatatttatacgaGTACGAGTGCGACAAGAACAAATTTTCTGTAAGACCTGAGTTGGAGGCCGCTATAGAAGGGAATAAGCGTGAGGGGAGACGTTCATCAGGTCAATTTGATGCACAAGCAGCCTTAGCAATGCATCCACCCCGCGGGATACCTGCTACGATGGCGCAAATTCCACATCATATGCAACCGATTCCGTTGCCTCTCGGTATGGTTGCGCCACGTATGCCAATGCCCCAACCCCCGCCGTCTATACCACAGCATGAGATCGAGTACAGAATTCGAGAGTACCTGAGGATGTTGCAACAGCAGAGAGAACAGCTGATGCAAAATGGAGCTGAGTCACCACCAGCTGTAAATTTGAATGGACAAGCGCCAGTGATGTCACCGCGGGAAGCAGCTCTCAACGCCATGGACATATCAACACGCTTCACGCTGTGGAGCATTTACGGCAATCAAAATGGCGTACACGTATCTCCACCTGATCTCGAACCGCAACGCGAGGCCTTGAATCTGAGCGAGAGTCCTGGGTCCAGTACTTCAGGAGGAAAGCGTGAGGCCTCTCATTCGGCATCTCCACCACCACCTGCAAAACGTCGTCTAAGGTCAACATCACCAAGCACTTCTTCGCCCTCGTTATCATCTGGAGTGGCACCACCAGCACACACACCACAGCTCAATACGTCTTCTCCATCGCACGCGTTTAATAGTCCATCGACGTCGCACGCGTTCAACGGTCCATCAACGTCACACGCGTTTAATGGACCTTCGACATCGCACAGTTTCAATGGGCCATCAACATCACACGCCTACAATGGACCTTCAACATCTCACGCTTTTAATGGTCCAACCACCAATGGAACTAACGGAGCCACCTTTAAGATTACCACCAGAGGTGATGCAAGCACAGGAGACCAGCAACTAGTAGTGATAATGGAAATCAACGGTGTCACATACGAAGGCATACTCTTTCCCGCCAATGACTCAGAAAATGGGCATAGGCAAATGGTatcttaa
- Protein Sequence
- MSRACSLIELLCSCGVIRWGTRCSKHRHNVAPDKAGRRCFNVSQTELRWIVLNFTAPFMIDRCTPINRLPIMAKSVLDLFELYNLVIARGGLVEVINKKLWQEIIKGLKLPSSITSAAFTLRTQYMKYLYEYECDKNKFSVRPELEAAIEGNKREGRRSSGQFDAQAALAMHPPRGIPATMAQIPHHMQPIPLPLGMVAPRMPMPQPPPSIPQHEIEYRIREYLRMLQQQREQLMQNGAESPPAVNLNGQAPVMSPREAALNAMDISTRFTLWSIYGNQNGVHVSPPDLEPQREALNLSESPGSSTSGGKREASHSASPPPPAKRRLRSTSPSTSSPSLSSGVAPPAHTPQLNTSSPSHAFNSPSTSHAFNGPSTSHAFNGPSTSHSFNGPSTSHAYNGPSTSHAFNGPTTNGTNGATFKITTRGDASTGDQQLVVIMEINGVTYEGILFPANDSENGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01197507; iTF_00441264; iTF_01360391; iTF_00156983;
- 90% Identity
- -
- 80% Identity
- -