Dmen032827.1
Basic Information
- Insect
- Diaphora mendica
- Gene Symbol
- retn
- Assembly
- GCA_949125395.1
- Location
- OX421326.1:8687942-8701991[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-20 6.8e-17 63.1 0.1 15 89 8 80 3 80 0.93
Sequence Information
- Coding Sequence
- ATGGAGAAAGATCTTTACGTTCACAAAGgTACACCAATTAATCGGTTGCCAATAATGGCTAAGTCTGTGTTAGACTTGTACGAGCTATACAACTTGGTGATTGCCCGCGGAGGACTAGTGGAAGTAATCAACAAAAAACTCTGGCAAGAAATCATCAAAGGTCTAAAATTACCATCTTCTATTACATCAGCAGCCTTTACACTCCGTACACAGTATATGAAGTACTTATATGAGTATGAAtgtgagaaaaataaattttctgtACGACCTGAGTTGGAGGCAGCAATAGAAGGGAACAGGCGTGAGGGGAGACGTGCTTCCGGTCAATTTGATCCACAAACAGCAGCCATGGCATTGCATCCACCCCGTGGGATACCTGCCACGCTGGCGCAACTTTCACATCATATGCAACCGCTTCCGATGCCACTCGGTGCAGTCCCAACACGTATGCCAATGCCACAACCACCACCAACCATACCACCGCATGAACTCGAGTACAGAATCCGAGAGTACTTGAAAATGTTGCAACTACAGAGAGACCAGCTGATGCAAAATGGTGCCGAATCACCACCGGCTGTGAGCTTGAATGGACAGGTGCCAGTGATATCCCCCCGCGATGCTGCTCTCAACGCCATGGATATTTCCACACGCTTCACGCTTTGGAGCATTTACGGCAATCAAAATGGCGCACATATATCTCCACAGCCTGATCTCGAACCACAACGCGAGGCCTTGAACCTGAGCGAGAGTCCCGGCTCCAGCACTTCGGGAGGAAAGCGCGAGGCCTCTCAATGTTCACCACCTCCCCCGGCTAAGCGACGTCCAAAATCAAGATCCCCACCGAGCGCCACCACGCCCTCGTCGTCGTCATCTGGGCTGGCGACTCTTGCGCACACACCTCAACTCGCTACTCCTTCTCCACCGTTTAGCGGCCCATCAACATCGCATGCGTTCAATGGTCCTTCAACGTCCCACGCCTTCAACGGACCCTCGACATCACACAGTTTCAATGGGCCATCCGCACCACACGCTTACAACGGACCTTCAACATCGCACCCTTTTAATGGCCCAACTACCAATGGAACTAACGGAGCCGCCTTTAAGATTACCACAAGAGgTGATGCCAGCACAGGAGACCAACAGTTGGTAGTGACAATGGAAATCAACGGTGTTACATACGAAGGCGTCCTCTTTCCCTCTAATGGCTCAGATAATGGTCATAGGCAAATGGTGTCTTAA
- Protein Sequence
- MEKDLYVHKGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLKLPSSITSAAFTLRTQYMKYLYEYECEKNKFSVRPELEAAIEGNRREGRRASGQFDPQTAAMALHPPRGIPATLAQLSHHMQPLPMPLGAVPTRMPMPQPPPTIPPHELEYRIREYLKMLQLQRDQLMQNGAESPPAVSLNGQVPVISPRDAALNAMDISTRFTLWSIYGNQNGAHISPQPDLEPQREALNLSESPGSSTSGGKREASQCSPPPPAKRRPKSRSPPSATTPSSSSSGLATLAHTPQLATPSPPFSGPSTSHAFNGPSTSHAFNGPSTSHSFNGPSAPHAYNGPSTSHPFNGPTTNGTNGAAFKITTRGDASTGDQQLVVTMEINGVTYEGVLFPSNGSDNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00822670;
- 90% Identity
- iTF_01360391;
- 80% Identity
- -