Hpro015934.1
Basic Information
- Insect
- Hypena proboscidalis
- Gene Symbol
- -
- Assembly
- GCA_905147285.1
- Location
- LR990136.1:6343612-6352976[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.0051 0.53 12.0 1.1 3 23 208 229 207 229 0.96 2 22 0.31 32 6.3 0.3 1 22 621 642 621 642 0.95 3 22 0.002 0.2 13.3 2.1 3 22 718 737 718 737 0.96 4 22 1.8 1.8e+02 4.0 0.0 3 23 746 767 744 767 0.89 5 22 0.0019 0.19 13.3 0.4 3 23 786 807 784 807 0.96 6 22 0.018 1.9 10.2 1.4 1 23 813 836 813 836 0.95 7 22 0.12 12 7.7 0.0 1 23 859 882 859 882 0.90 8 22 0.0051 0.52 12.0 3.5 1 23 887 909 887 909 0.97 9 22 0.064 6.6 8.5 0.1 1 23 915 938 915 938 0.95 10 22 0.0021 0.22 13.2 1.3 1 23 951 973 951 973 0.97 11 22 0.00016 0.017 16.7 1.8 1 23 1028 1051 1028 1051 0.97 12 22 0.002 0.2 13.3 1.4 1 23 1112 1135 1112 1135 0.96 13 22 0.0022 0.22 13.1 2.1 2 23 1161 1183 1160 1183 0.95 14 22 0.021 2.2 10.0 0.1 2 23 1189 1211 1188 1211 0.94 15 22 0.022 2.2 10.0 0.3 1 21 1255 1275 1255 1276 0.94 16 22 0.00039 0.04 15.5 1.0 1 23 1286 1308 1286 1308 0.93 17 22 0.0001 0.01 17.4 0.4 2 23 1398 1420 1397 1420 0.93 18 22 3.6e-07 3.7e-05 25.0 1.4 3 23 1427 1447 1426 1447 0.98 19 22 0.089 9.1 8.1 0.3 1 23 1466 1488 1466 1489 0.95 20 22 0.086 8.8 8.1 0.0 1 23 1512 1534 1512 1534 0.98 21 22 0.025 2.6 9.8 0.6 1 23 1540 1563 1540 1563 0.95 22 22 0.00023 0.024 16.2 0.4 1 23 1571 1594 1571 1594 0.96
Sequence Information
- Coding Sequence
- aTGAATGTGAACTGTGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATATTTCCTACCACCAGTTCGGATGACTCGGATCCTCCCGTCCTCGTATTGAAAATCAAGGATTGTGTGTCTGTACAGATAAATGAGGATGACGACCTGCCCACTAAAGTTTGCAGGAAATGCATGGACAATGTCAACAATTggcatatttttaaatgtgtctGTGATAGGACACAAAACAAACTACAGTCTCTGATAAGTAAAGATGGCAGCCAACTAGAAGAGGTGCAAGTAAAGAGTGAACCACTATCTGATGAAGCTTATGAAGATGGAGTGGTCATTGATGGCTCATATCCTAACAGTGAGAATGCCACACAGGCCAGCAAAGTTCAACCTGAAGGTCCCCCTATCTTGGCATCACTGGGGCTCACACCAAGGAGTGATAAGGGAGTGGAGAGTGAAAAAGAGGAGGAGGAAGATGACGAAGAAGAGTTGAACGAGCCTATTCAACCCTTGCCCAAGATGCCGCATATGCCGGAGGTGTCTATCACAGTGATGCGTCCCACCGGAGAGACGCTCCACGCCCGTCAAGGCATACACCAGCTCGCTTCCAAAGACTGCCTCGTCTGCGGCCGCACCTACCGATACTCCCACAACGCCCGACGTCATGAACTTACAGCCCACAGTTTCGACAGGTACACCAACAAAATTACTCCCAAAAAGACCCTTGCTCACCTACAACCTAAACTAAGACCAAACCCCTTCAACCCTAAAGCAAGACTCATGCCCAATCCTATTAGTCATAAGATGCAATTCATGAACAAAAAAATTCCcgcaaaaattatacctatCAACAAAGTTATCATGCCACAAAAACCCATACCAATCAAATCTGCCAAAATGACACAAAATAATCTGCCTTACCCTCTTCGTATCAAAGCACTTAAAGATTTACAAATTAAGAAAAAGGagcctcaaattttaaagactttaTTGACCTCAAAGCCTGAAGTTCTAGTTTCTGAACCTGAAATAATAAACTCTGGCCCGGAAAGTCCCGAAACGCTAATATCTGAGCCAGAAATTGCCTCCTTTCAAGTTGAAGCAATACTCTCAGAGCCTGATGCTGATGGTTACGATCAGCAGCTAGGTGACGAGGAACTTGATGGGGACATGGATATTAACCAAAGTCAAAACTATGATACGGTCGATATGAATTCCGAAAACGAAATTGAGATCGCTCGTCAGCAAGCCGATCCTGAAGGTGAGGAATTAGTGGATGGTGATGAGAATATGGACCAAGATGATGACAACATGGACGGAGCTCAAAGTGACAACGACCAGGAAGCTGATGCTGAAGGTGAGATTGTTGATGATACAGCAGAAAGTCATGAGAATTTGGAAATTGATGAGGGTCTCGACATTAAAGCTGAGACCGACACGAAAGACAGTGAGGAAGGTCAAGAAGAAGGAGAACAGGAAGAAAATGAAGTGAATCATGATGAGAATGAGGACGAAGATGAAGATGACCTTCCAATCTCGATACAGCCAGTTGTTGAAATCAACGAAGATATGCAAGCCAATTCCTTCAACAGCGAAGCGGCTGACGATGACGATGACACTGTCGATCCTAACGACACTGTCGATCCTAATGACACTGTCGAAGAGGAGGTCACAGTCAAGGAACTCGACCCAGACAAAACCTACGTCACCAAAACGCAACGAGACTTCATCGAGAAGTATCGAGACATCATCCAACAAATCAATACAAAACGTTGCTTGTGTTGCGACAGAGAACATCCGCGAAGGAAAGCTGTTAtacaacatttacaaaaaaatggacACAAGGTCCCCAAGCACACGTGTTACAATTGCGTCGTTACTTTCGGACACATTGGCGCCCTACTTAGCCACATGAGGTCGAACTCCTGCACTAACTTGTGGAAGATTATATACAACGAAACTGGTATTACAGATGACCTGGTTGTGGAAGATGAACCAAAAGAAGTGAAGGTGCAATACAAAGACGTTTTCAATGCCAGATCATATGCATGCAGACTATGTCCAGCTAAATTCCAATTGAAACAGTTCATTATGAAGCATGTATTGGATACGCATGAAGATGGACAATCCATGGTTCCACTCGGCTGTGTACATTGCCGTGCGAGGTTCAAAGacaaaagtttattaaaaaaacatattcgcAAAGGCGATTGCACAGTCTATGTAGCATGTGATTTATGCCCAGAACAATTCGATACTATGCAGGCATTTAACGACCACGCCTTAGCCGCTCATGCTGGTAGCTATGAGGATGCCCAGAGCAAATGTGTTGACGGTCGCCCCACCGACTGTCCGTTGTGCGgcaagaaaaataatacttatcagAATTTAGTGAAGCATATGAGAATTATACATAATGAGGAGAAGCCTCATTACTGTCAGCACTGCGATGCTAAGTACGAACTAGCAGCCGATCTCAACAAGCACATTTACATGGAACATTCACTTTGCATGGCGAACAACGAACCGGATATGTCAATTGTGAAGGAAGAGGCGGAAGAATATCATTATTCTTGCACCGAGTGTAACGCTATATTCGAGACCGTGGACGCGTGGACAGACCACCAGGTGGCCGAGCATAACCAAGTGGCTCACCACTGCGACCAGTGCGACAAGAAATTCTTGCGTCCCTCCGAACTCGCCGAACACAAGAACACTCACTTGAGGGTGAAGTTCTACCCTTGTAGTGTATGTGTTAATTCGTACAGCACCCCCCAGAAATTATCTGAACATGTGCAACAAGCTCACCCCGGCGTTGGCGCTGCGGCTGCCGCCGAATCTGAATTTTTCTGCGATATCTGTATCAGGTCATTCAAAAGCCGACAAGCTTATTCGAACCACATGCGCATACATGCCAAAGTACCTACTACGAATAGAAAACCAGGAGAGACTACTCCCACTAACAACAAAGGATTTTCGCCTTCGATTATCGGCAAACCCATCAAACAAGTATACCCGATGGTTCAACCTGGATTTGTTTCATTTAAACCACATTACAACATCCCTAATGCTCCATATTCATGTGACATTTGTGGTAAAGGATTCATGCACAAGAAGAATATTTGGAAACACAAAAAAGTTTTGCATGcagatattataaatgagagaAATGACAGTGAGGAGAACACGATGCAAGCTTCTACCGAAGAAGAGGAGTTTAATCCAGATGAAAACGGCGCTTTACTTTCCACGCCGcagtttaatagttttaattttactaatttCACAAATAATGTGCAACAAGTACAACCAGACCCCACGCCATCATACTCATGTGATTTGTGTTCGAAGAAATTCCCGCTAAGGACTAGTCTATGGAAACATAAGCGAGCTAAACACGGCGTTGTTAATCCCAACTCGACTAGCAACGAGACCCATACCCCATCAGCGAGTGGAGAAAGTAGTAGTAGATCTAGTTGTACAATTTGTAGGATTACTTTTTCGGATAAGAAATCTTACTATCGCCATCGAAAGAATGTTCATAAATCTACAGTACAAATGTGTAAAATATGCGGCAAACCTCTTAATTCCACTGTAGAATTGTACGAGCACTTGAAGGCCGCTCACGCGAGAGAACTATTAGGTTACAATGCGAACCAAGGTTCCAGTAAATCTCAAGAAGTGGCACAAGAAATAGAACCTGAATATGAGAACGAACCAGAGGCTGTTGATCCTAGTCTCGATTATCAGGCGCGTTATGATTGCGAGACTTGTGGAAAACAATTCGTCGGTTTGTTAGCATTGCAGAACCATCAATGTTTAAACCAGGTGGCATCACAACCACAGACTTTCGACTGTGAGATTTGCCACAAGAGTTACACGTCAATATCTGCATTAAAGAGCCATCGAGGTTGGCACTTGCGATCTCCCGATGGCAAAGCTGCTGCCAACAACAGCGGGCTTTGGATGCCTCAGCACAAAGTTACGAGTAAAATAAGTAAACACGAAGTTGTCGATCCGTCACAACTCGCTAAAGTGACGCACTCGAGCCCTGCTGCTGCGGTAACAGCCAAAAGAAGACTGCCACCGGAGGTCGAGGTCACAGTAGTTAATCCAAACAAGAAAATGCGTTCTGACGATTCCGTTGAACTGGAACAAAATAATTCTGGCTCAACCGAGGACAAATATTGCACGATTTGTGATAAGGAGTTTACTAAGCGAGCGGCTTATCAGCGGCACATGGACGAAGTTCATCAACCTAATTCTGTGTTTTGTCCTGTTTGTGATAAGAGTTTCACGAGAAAGTCTACGTTACTTATTCAtatgaaaaaacattatgaGACCGGTGAAGGTAGTTCAACTGCTGCTGGTCAGGGTGAGGATGAGATATATTCTTGTGATTTATGCGAAGCGCAGTATGAGGATGAGCAGGCACTGAGGGCACATAGAGTGAGGCATCATGGCGAAGAATCTGACGAGGACGATGATGAAGACGACGGCAATGTTCCCATTGCTCCTCCAGGAGAATTCACATGCGGGCAATGCGGAGATGGTGTTGCTACACCTAGAGACCTGATTGCTCACCGTTCTATGCACGCTACCCCTACCAAATTCTTTTGTAACATATGCAAAGTATACTTCGCGAGGGCACTAGACCTGTCTTCTCATACGAGGGCGAGGCACGCAGATAACGAAAAAGTCTTCTTCCCCTGTGCGATGTGTGATAGGTTTTACATGAACAAGAAGAGTTTGCAGCGGCACATTGAGATGGCTCACTGA
- Protein Sequence
- MNVNCDRVCRLCLSSRGELLPIFPTTSSDDSDPPVLVLKIKDCVSVQINEDDDLPTKVCRKCMDNVNNWHIFKCVCDRTQNKLQSLISKDGSQLEEVQVKSEPLSDEAYEDGVVIDGSYPNSENATQASKVQPEGPPILASLGLTPRSDKGVESEKEEEEDDEEELNEPIQPLPKMPHMPEVSITVMRPTGETLHARQGIHQLASKDCLVCGRTYRYSHNARRHELTAHSFDRYTNKITPKKTLAHLQPKLRPNPFNPKARLMPNPISHKMQFMNKKIPAKIIPINKVIMPQKPIPIKSAKMTQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIINSGPESPETLISEPEIASFQVEAILSEPDADGYDQQLGDEELDGDMDINQSQNYDTVDMNSENEIEIARQQADPEGEELVDGDENMDQDDDNMDGAQSDNDQEADAEGEIVDDTAESHENLEIDEGLDIKAETDTKDSEEGQEEGEQEENEVNHDENEDEDEDDLPISIQPVVEINEDMQANSFNSEAADDDDDTVDPNDTVDPNDTVEEEVTVKELDPDKTYVTKTQRDFIEKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNSCTNLWKIIYNETGITDDLVVEDEPKEVKVQYKDVFNARSYACRLCPAKFQLKQFIMKHVLDTHEDGQSMVPLGCVHCRARFKDKSLLKKHIRKGDCTVYVACDLCPEQFDTMQAFNDHALAAHAGSYEDAQSKCVDGRPTDCPLCGKKNNTYQNLVKHMRIIHNEEKPHYCQHCDAKYELAADLNKHIYMEHSLCMANNEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCVNSYSTPQKLSEHVQQAHPGVGAAAAAESEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGETTPTNNKGFSPSIIGKPIKQVYPMVQPGFVSFKPHYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADIINERNDSEENTMQASTEEEEFNPDENGALLSTPQFNSFNFTNFTNNVQQVQPDPTPSYSCDLCSKKFPLRTSLWKHKRAKHGVVNPNSTSNETHTPSASGESSSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKICGKPLNSTVELYEHLKAAHARELLGYNANQGSSKSQEVAQEIEPEYENEPEAVDPSLDYQARYDCETCGKQFVGLLALQNHQCLNQVASQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVVDPSQLAKVTHSSPAAAVTAKRRLPPEVEVTVVNPNKKMRSDDSVELEQNNSGSTEDKYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYETGEGSSTAAGQGEDEIYSCDLCEAQYEDEQALRAHRVRHHGEESDEDDDEDDGNVPIAPPGEFTCGQCGDGVATPRDLIAHRSMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00852035;
- 90% Identity
- -
- 80% Identity
- -