Hpro034233.1
Basic Information
- Insect
- Hypena proboscidalis
- Gene Symbol
- -
- Assembly
- GCA_905147285.1
- Location
- LR990154.1:2559678-2562017[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.0037 5.3 8.3 1.0 18 43 9 31 6 32 0.94 2 19 1.3 1.8e+03 0.2 0.3 18 43 37 59 33 60 0.76 3 19 0.00058 0.83 10.8 0.1 18 43 68 90 64 91 0.94 4 19 0.0012 1.7 9.9 0.6 17 44 98 122 96 122 0.92 5 19 0.01 15 6.9 2.9 19 43 130 151 129 152 0.95 6 19 5.8e-06 0.0083 17.3 0.7 14 43 156 182 154 183 0.90 7 19 4.4e-05 0.063 14.4 0.2 18 44 189 212 184 212 0.91 8 19 0.00021 0.31 12.2 0.3 18 44 220 243 215 243 0.92 9 19 0.0063 9 7.5 0.1 14 44 252 279 246 279 0.90 10 19 0.54 7.8e+02 1.3 1.5 8 43 297 327 290 328 0.76 11 19 3.7 5.3e+03 -1.3 0.6 17 29 334 346 327 352 0.75 12 19 1.5 2.2e+03 -0.1 0.1 15 26 361 372 357 379 0.82 13 19 1.2 1.8e+03 0.2 5.9 17 43 408 431 399 432 0.87 14 19 0.0046 6.6 8.0 3.5 11 43 460 489 454 490 0.77 15 19 0.074 1.1e+02 4.1 0.8 17 44 495 519 491 519 0.85 16 19 0.69 9.8e+02 1.0 1.0 18 28 526 536 523 549 0.82 17 19 3 4.3e+03 -1.0 0.9 19 43 557 578 552 579 0.74 18 19 4.8e-05 0.068 14.3 1.1 6 44 608 645 606 645 0.79 19 19 1.9 2.8e+03 -0.4 1.1 13 27 690 704 679 706 0.77
Sequence Information
- Coding Sequence
- ATGTATCAAAACACGCTTGACTTCGTTTGTGACTACTGTTCCCGTACGTTCACAAGAAAGTACAACCTACAGACTCATATAGAGAACTGCCATATAAACTCATCCTCCCATTGTGATATCTGCGGTCAAAGCTATGGCAGCCCAGCCGGTCTACAACTTCATCTTACCCGAGGACATAACAACTATGGACAACCATCACCTGAATGTGATTTATGTGGCAGAATCTTTACCAGAAAGCAGAATATAATGTCGCATATGATTACAGTACATTTGCAAGGATTAGGAGATGACATACGGTGCAGACAGTGTGATAAAACGTTTACTACGGAGAGGAATTTGAAGCGACATATTAATCAACTTCATAATCCCAATATAGAGTATCCTATGtgctattattgtaataaagtaTTCAGAGGAAAGCATACACTGATAGCTCATATACATTCAGTTCACGGTGGGGGCGACAAAGATATAATAAAGTGCCATCTATGTGAAAAGGTGTACACTAACACAAGAAATTTGAAGCGACACGTTGAAATGTTTCATGGTGAACGAGAGGAATTCAAATGTGATATTTGCCCGAAAGTTTATACGTCTAACCAAAGTTTGAGACGGCATTTGAGAACTGCACACAGCACGGACAGCCAAGACCAGTATTCTTGCAACTATTGTGAGAAAATTATACTTGGGAGAGAGAATCTTGAGAGTCATATTCAGTACAACCATCAGATCTTCGAAGTGGAGGCTAAGGTTGATActgaaattgtttgtgaaacaTGTCATCAAAGTTATGAAGAAGAATCTCAGTTGCGGCAACATATCAAAGCCGAGCACTCATTCCAGGCCTTCTACAAGTACTGCAAGAATGTTCTAATAAAACAGTATGGCACGGAGTATATCAATAATATCTACAACTGTGAGTACTGCCAGCATGCTTACCCTACAGTCTACGAGCTTAAAGACCATATGAGAAATACTCATGATACGGAATATACTCTATCAACATGCAATGTGTGTTTTAACAAGTTTTATAGTAAGGAGACGATGTCAGCTCATAGGAAAGTCTGTCTACCCCCACCTAATGTAAACTCTTGCTGCCACTGCGATAAGCTATTCACAGATATATCAAGCTTGGAGTTCCACAACAGAATTTTTCACCCGCAAGCTCAAATCGCTGATTCTAATATCACATCAACAAATATAGACGAAGAGACTTCCTGTTTTAAGTGTGAGCATTGTGATCGTATGTACTACAGCGATAGGTCCCTTAAACATCATATGAAGCTCAAACATACAACGGACGAGCAAGTTGAATGTGAAAATTGTGGAAAAATATGCAGTAATAAATACTATTTGGCGTCTCATATGAAAATAGTTCATAACAACGATTCTTGGTCCCGCTGCGAGTATTGTGATAAACAGTTCAAATCTAAAAGGAATATAAGGCGGCATATTGAATACACTCATCTAGGCATGCAGAGATATAAGTGTATTGAATGTGAGACGTTGTTCAAAGAAAAACGGAGTCTACGGAAGCATGTGAGAACAAAGCATCCTAATTCAGCCGTGTTTCCACAATGCCATATTTGCCATAAACGCTTTGAATCAGCCAAGTCCTGTAAAATACACCTTAAGCTCCTTCATTCGTTCAATATGAACACATATCCGTGCCATCTATGTTCAGTATCCTTCAGCTCCAACGAGGCGTTGACTATTCATCTGAACACTAAACATTTAGCCGAGGACGAGATTTACAAATGTGAGGAGTGCAACCTCGTTTTTAAAGGGCAGGAGCGATTTGACAGTCACAACGAAGTCAGCCATGTCAATTTGGTGCCAAATATCAAGCAGAAAGTACTCCCTAGATGCATTTTGTGTATGAAAGATTTTAGTACACGGAAAACTCTAAAGCGACACATAAAAAAGTTTCATAACGATTTTGAAGTCGATGAGCTGGCAACATTTGGTTCTAGACGCAGAACATTTACAATAGACTGTGAAGATTGTATCAAAAGTTTCAATGATGAGTTTCATTTCAACGTGTATCAAAAGATCAAACATTTAAAAGATTCTATCATTTTCAAATGTGAGTCTTGTCATTGCTCGTACAATTCTCTGGAGTTTGCCATTCAGAGGTACAGAATTGCCAACGGAGAGGGGTgcaaaactaaaactatattgAGCGAGCTGTGTACTACTGAAATGAGCGAGGAGGAGAATGATTTCTCTGGGTTTGGTTCCCTTCACGAGCTGCCGGAGAGTACTACTAATGATTTGGTCATTAAAATAGAACCGCTGGATATGTTTGAAGAAGTTAAACAAGAACCTGTATCTTCTTAA
- Protein Sequence
- MYQNTLDFVCDYCSRTFTRKYNLQTHIENCHINSSSHCDICGQSYGSPAGLQLHLTRGHNNYGQPSPECDLCGRIFTRKQNIMSHMITVHLQGLGDDIRCRQCDKTFTTERNLKRHINQLHNPNIEYPMCYYCNKVFRGKHTLIAHIHSVHGGGDKDIIKCHLCEKVYTNTRNLKRHVEMFHGEREEFKCDICPKVYTSNQSLRRHLRTAHSTDSQDQYSCNYCEKIILGRENLESHIQYNHQIFEVEAKVDTEIVCETCHQSYEEESQLRQHIKAEHSFQAFYKYCKNVLIKQYGTEYINNIYNCEYCQHAYPTVYELKDHMRNTHDTEYTLSTCNVCFNKFYSKETMSAHRKVCLPPPNVNSCCHCDKLFTDISSLEFHNRIFHPQAQIADSNITSTNIDEETSCFKCEHCDRMYYSDRSLKHHMKLKHTTDEQVECENCGKICSNKYYLASHMKIVHNNDSWSRCEYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSAVFPQCHICHKRFESAKSCKIHLKLLHSFNMNTYPCHLCSVSFSSNEALTIHLNTKHLAEDEIYKCEECNLVFKGQERFDSHNEVSHVNLVPNIKQKVLPRCILCMKDFSTRKTLKRHIKKFHNDFEVDELATFGSRRRTFTIDCEDCIKSFNDEFHFNVYQKIKHLKDSIIFKCESCHCSYNSLEFAIQRYRIANGEGCKTKTILSELCTTEMSEEENDFSGFGSLHELPESTTNDLVIKIEPLDMFEEVKQEPVSS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00677880;
- 90% Identity
- iTF_00822189;
- 80% Identity
- iTF_00822189;