Hpro016367.1
Basic Information
- Insect
- Hypena proboscidalis
- Gene Symbol
- -
- Assembly
- GCA_905147285.1
- Location
- LR990136.1:14765380-14769559[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.8e-08 4e-05 24.4 0.2 4 40 108 144 105 149 0.87
Sequence Information
- Coding Sequence
- ATGCATCGAGAAAGGTGGTCAAGAATCGCGACACAATGGATGCCGGAGAACCGATGTCGTCGCCGAGGCCGACCGAGAAAACGCTGGcacgatgacttggacacctttctggcaGACTGGCAGGATAAGGCTctggagagggaagaatggaagtcttcgggggagacctttgccgaacaatgggacaatatagTCCAAAACAACCGCGAGGCGGAGCGCACGcgtgtttttataaaatcttggcggaataaaaaTAACATCATGGACAACGAATCACCAGCTTCTACCATAAGGAAAAAAAGGGCTCATTGGACTTCACAACAGATGGAAAACGCTGTTAAAATGGTAGAAAGGGGTATATTATCAACATATGCTGCTTCAGCCAGATACAACATCCCAAGAAGAACGCTACGCAACCATCTAAAGAGTGGTTCGACTACACGAAAGCTAGGTCGGTCAACTATATTGACTACAGAACAAGAAGCTGGACTTGTCAGAAGAGTCATACGTTTGGCTGATGTAGGAGTGCCAATGACTGCAAAGATGTTGCGCATACAggctttttctttttgtaaaattaagaaaatacctAACACTTTTAATGATGCCAAAAATACCGCTGGGAGGAAATGGTTAAGGTTATTTCTCAAAAGACATCCTGAATTAGCACGTCGTAAAGCACAGATGATGAATCCAGCTCGTGCtcagaaattaaataaagatattgttGGCGACCACTTTTCTAAATTCAAAAGCGTGCTGGATAGCCTTGGAATTGAACATAGACCTGAAAGCATTTACAACattgatgaaaaaaattgtCGCATATCTTTGCACCATCAGCAGGAAATTCTGACAGCCAAAGGAAGAAAGAGAGTTCATCAAATAGCAAATGAACATGCCGAAAGTGTGACTGTGGTAGGCTGCGGCAATGCTATAGGAACTGCTATTCCGCCTATGATACTGTTCAAAGGTAAAAGACTAAAGCCAGAATTCCAAGATAATTTACCTCCAGGCTCTCTAGTAAAGATGACGCCAAAAGGAAGTATGACGACAGAAACTTTCATAGAGTTTATTAGTCATTTGCATAAATACAGAACCTCAGGGCCATGTCTACTCATATTTGATGGTGCAAAATGCCACCTGGACTTTACTATTGTCGAGGAAGCTGAGAAATGTGGCATTACTTTATACTGTCTTCCATCAAATACCACGCACGAGTTACAACCCATGGATAAATCTGTTTATCGTTCTTTCGAGCACCATTGGGACCAAGAATTGATTAAATATGTCAGTCAGCATCCCGATCGAACCCTTAACAAGACAAGCTTCAATGTCATTCTCTCGCAAGTATGGCCAAAATGTATGACTATTACCAATATCTCGAATGGGTTTCGCGCTACAGGGTTGTATCCATTTAACCCAGATGCTATTCCTGAAGAGGCGTTTGCGCCATCTGCTTTGTCGGAACTTCCAAATCCTATAAACAGTGATAATATTGCTATCGTATCTGATGAATCTGGGGAACAAGAGATTTCAACTGCAAATGTGGAAGATTCGGATGAGTCGGGCACAGATACTGAGAATGTACCATTGTGCTTGTTCTCAAAAAACAATCCAAATGCTGGAACCCCCCTTAAGATAGACAACCAATCAACCACGTGTGAGATTCATGAATTTTTACCAACTCCAAAGTTTAAAGTAAAAGCGACAGCTCCACGCAAGAAGTCTTTGAACTACAGGGCTCAAATGGTAACAAAAGATTTGTTTGGTGAGAATGCTACGACTTCCACATCACAGATTACTGCACCATCGTCAAGTGTAGAAGATGTTCCTAGCACTTCTTCAATGATTAAGATTAAGACAAAGACATCAAAATCAGCGTCAGTTACGGGATGTACATCTGCACAACCTGCAGTTGCTGCAACCCACAAGAAAACCTCAGTAAAGACGACTTCTTTGACAGCAGTTAAGCTGAAGCGTCACGAGAATGAACCTTCTTGGTACTGTCCAGCATGTAAAGAAGATCGTGTTGACGATATGCGACAATGTCTTAATTGTGGCGTTTGGTATCATGAGCTGTGTGTTGGACTCACACCTgctgacaaaatattttattgttcaggtgattgtcaaaaaaaaaagattaaaaaggCTGATTAA
- Protein Sequence
- MHRERWSRIATQWMPENRCRRRGRPRKRWHDDLDTFLADWQDKALEREEWKSSGETFAEQWDNIVQNNREAERTRVFIKSWRNKNNIMDNESPASTIRKKRAHWTSQQMENAVKMVERGILSTYAASARYNIPRRTLRNHLKSGSTTRKLGRSTILTTEQEAGLVRRVIRLADVGVPMTAKMLRIQAFSFCKIKKIPNTFNDAKNTAGRKWLRLFLKRHPELARRKAQMMNPARAQKLNKDIVGDHFSKFKSVLDSLGIEHRPESIYNIDEKNCRISLHHQQEILTAKGRKRVHQIANEHAESVTVVGCGNAIGTAIPPMILFKGKRLKPEFQDNLPPGSLVKMTPKGSMTTETFIEFISHLHKYRTSGPCLLIFDGAKCHLDFTIVEEAEKCGITLYCLPSNTTHELQPMDKSVYRSFEHHWDQELIKYVSQHPDRTLNKTSFNVILSQVWPKCMTITNISNGFRATGLYPFNPDAIPEEAFAPSALSELPNPINSDNIAIVSDESGEQEISTANVEDSDESGTDTENVPLCLFSKNNPNAGTPLKIDNQSTTCEIHEFLPTPKFKVKATAPRKKSLNYRAQMVTKDLFGENATTSTSQITAPSSSVEDVPSTSSMIKIKTKTSKSASVTGCTSAQPAVAATHKKTSVKTTSLTAVKLKRHENEPSWYCPACKEDRVDDMRQCLNCGVWYHELCVGLTPADKIFYCSGDCQKKKIKKAD*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01220597;
- 90% Identity
- iTF_00821738; iTF_00821739; iTF_00821747;
- 80% Identity
- iTF_00821738; iTF_00821739; iTF_00821747;