Hpro017436.1
Basic Information
- Insect
- Hypena proboscidalis
- Gene Symbol
- -
- Assembly
- GCA_905147285.1
- Location
- LR990137.1:11154589-11155779[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-09 1e-06 29.5 0.0 6 35 20 49 15 53 0.89
Sequence Information
- Coding Sequence
- ATGCCGAAGGTTACCTTtggaaaaaagtatttaaaagcaTATACAGAAAAAGATGTAGAAAATGCCCTGCAAGCCATAAAAAATGGAATGAGTAAGAAAACTGctgcaaataaatttaatatcccACGGTCAACTTTGCAGTTTCGCCTATCCAACCTATTTGTTAAAAGTCGACCTGGTCCAGATACAGTTCTGACTAGTGCAGAAGAAAAAGAGATAGTTAAATGGATAATTGCAGCTTGTAAAAAAGGATTTCCACGGCGTAAAGAGGATGTCATAAAGAGCGTCAAACTGTATTTGGATGAACATCCCAGACCAAACAGTTTTATAGATAATACGCCAGGCGAGGGAtggtataaattatttttgaagagGCATCCTGAGCTTTCCATACGAACATCAGAGGCTATAACTTCAGCAAGCTCAAAGTTGTCAGAGAAGCAAATTAGAAATTGGTTTTCACAAGTAGAAGAATATCTAAAAGAAAATGATCTTTTTCATATTTTGAGTGATCCATCCAGAATTTACAATGGGGATGaaacaaatttcattttatgCCCAAAGAATACAAAAGTTATTGCTTTAAGAGGAACGAAAAATGTGTATGAAGTAGATCACGCTCAGTCTAAATCATGTGTTACTgtaatgtttacattttcagcGGATGGTGAAACAACACCTCCTATGATTATTTACCCCTTAAAGAGAATGCGACCAGAGATTCAAAAGTCTGTACCTAGCGAGTGGGGTATTGGCTTGTCAGATAATGGTTGGATGAAAGCAGAGCTTTTCATCCAGTACATACAGAATGTTCTGCATCCAGCGCTAAAGAAGAATAATACAACTTTTCCAGTAATTCTTTTTCTGGATGGGCTTAAAAGCCACACAACACTTCAGCTTGCTCAACTTTGTCAAAATATTGGTATAATACTTATAGCTCTATACCCCAACGCAACCCGGATTTTGCAACCAGCTGACGTAGCAGCATTTCGCCCAATAAAAGTAATGTGGCGTAAAGCAGTCCTAGAATGGCGAACAGATAACTTAACAAAACCCTTACTTAAAACAGATGTTGCTCCTATATTGGAGAAGCTTTTACCTAAATTAAACAAGACGACGTTAAAAACGGTTTTGAAGCCTGTGGTTTATGCCCATTTAATCCCGATCAAGTGGACTATACAAAATGTTTAA
- Protein Sequence
- MPKVTFGKKYLKAYTEKDVENALQAIKNGMSKKTAANKFNIPRSTLQFRLSNLFVKSRPGPDTVLTSAEEKEIVKWIIAACKKGFPRRKEDVIKSVKLYLDEHPRPNSFIDNTPGEGWYKLFLKRHPELSIRTSEAITSASSKLSEKQIRNWFSQVEEYLKENDLFHILSDPSRIYNGDETNFILCPKNTKVIALRGTKNVYEVDHAQSKSCVTVMFTFSADGETTPPMIIYPLKRMRPEIQKSVPSEWGIGLSDNGWMKAELFIQYIQNVLHPALKKNNTTFPVILFLDGLKSHTTLQLAQLCQNIGIILIALYPNATRILQPADVAAFRPIKVMWRKAVLEWRTDNLTKPLLKTDVAPILEKLLPKLNKTTLKTVLKPVVYAHLIPIKWTIQNV*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00821732; iTF_00357409; iTF_00358482; iTF_00281150; iTF_00212388; iTF_00697270; iTF_00281148; iTF_01280190; iTF_00171697;
- 90% Identity
- iTF_00212388;
- 80% Identity
- -