Beup017404.1
Basic Information
- Insect
- Boloria euphrosyne
- Gene Symbol
- -
- Assembly
- GCA_951802675.2
- Location
- OX637887.1:7457714-7459033[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.3e-09 4e-06 27.2 0.0 1 35 15 49 15 53 0.93
Sequence Information
- Coding Sequence
- ATGCCGAAGGTTACGgatggaaaaaaatatacgaaaacaTATACAGAAGAAGATGTAGAAAAAGCCTTACAAGCAATAAAAAATGGAATGGGTAAGAAAACTGctgcaaataaatttaatatcccACGAGCAACTTTGCAGTTTCGCCTATCCAACCAATTTGTCAAATGTCGACCTGGTCCAGATACAGTTCTGTCTAGTGCCGAAGAACAAGAGATAGTTAAATGGATAATTGCAGCTTGTAGTAAAGGATTTCCACGGCGTAAAGAGGATGTTATAAAGAGCGTCAAACTGTATTTAGATGAACATCCCAGACCAAacaattttatagataatacaCCAGGCGAGGGATGGTATAAACTGTTTTTGAAGAGGCATCCTGAGCTTTCTATACGAACATCAGAAGCTGTAACTTCAGCAAGCTCAAAGTTGTCAGAGAAGCAAATTAGAAACTGGTTTAAACAAGTTGAAGACTATCTGAAAGAAAATGATCTCTTTTATATTTTGAGCGATCCATCTAGAGTTTATAATGGGGATGaaacgaattttattttatgcccAAAGAACACCAAAGTTATCGCTTTAAAGGGAACCAAAAATGTGTATGAGGTTGATCACGCTCAGGCTAAATCATGTGTTACTGTAATGTTCACATTTTCGGCGGATGGTGTAACAGCACCACCTATGATTATTTACCCCTTAAAGAGAATGCGACCTGAGATTCAAAAGTCTGTGCCTAGCGATTGGGGAATTGGCTTGTCAGATAATGGATGGATGAAGGCTGAGCTCTTCATCCAGTACATACGGAATGTTCTGCATCCAGCGCTGGTGAAGATGAATATCACTTTTCCTGTAATTCTTTTTTTGGATGGACATAAAAGCCACACAACACTTCAGCTTACTCAACTTTGTCAAAATCTTGGTATAATACTTATAGCTCTATACCCTAACGCGACACGGATTTTACAACCAGCAGACGTAGCGGCGTTTCGCCCAATAAAAGTAATGTGGCGTAAAGCAGTCCTAGAATGGCGAACGCACAACTTAACAAAATCCTTACTAAAAACAGATGTTGCACCTATATTGGAGAAGCTTTTGCCCAAATTAAATAAGACTACGTTGAAGAACGGCTTTGAAGCTTGTGGTTTATGCCCATTTAATCCAGACCAAGTAGACTACTCAAAATGTTTAATGCCCTATAAACCAGTCAAGGAAATATTGGATTACAACTGTTCTACAAGTCTTAACTATCATACATTTGAAGAAATAGTTGGAGCTCAGTTAATTAGAAAGATGAAAAATCAGGTGGTAGGAAAATAA
- Protein Sequence
- MPKVTDGKKYTKTYTEEDVEKALQAIKNGMGKKTAANKFNIPRATLQFRLSNQFVKCRPGPDTVLSSAEEQEIVKWIIAACSKGFPRRKEDVIKSVKLYLDEHPRPNNFIDNTPGEGWYKLFLKRHPELSIRTSEAVTSASSKLSEKQIRNWFKQVEDYLKENDLFYILSDPSRVYNGDETNFILCPKNTKVIALKGTKNVYEVDHAQAKSCVTVMFTFSADGVTAPPMIIYPLKRMRPEIQKSVPSDWGIGLSDNGWMKAELFIQYIRNVLHPALVKMNITFPVILFLDGHKSHTTLQLTQLCQNLGIILIALYPNATRILQPADVAAFRPIKVMWRKAVLEWRTHNLTKSLLKTDVAPILEKLLPKLNKTTLKNGFEACGLCPFNPDQVDYSKCLMPYKPVKEILDYNCSTSLNYHTFEEIVGAQLIRKMKNQVVGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00821724;
- 90% Identity
- iTF_01280190; iTF_00357409; iTF_00358482; iTF_00821724; iTF_00821732; iTF_00281150; iTF_00281148;
- 80% Identity
- -