Hpro023804.2
Basic Information
- Insect
- Hypena proboscidalis
- Gene Symbol
- -
- Assembly
- GCA_905147285.1
- Location
- LR990142.1:20310506-20314887[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.4e-12 4.4e-09 37.0 0.0 4 39 176 212 173 216 0.89 2 2 0.0013 0.74 10.7 0.6 2 26 228 252 227 252 0.92
Sequence Information
- Coding Sequence
- ATGCCCGGCTACGGTCTGTCTCAGGTGAAATGCGAGCCTCCGTCCGACGAAGAAGATAGCAATTCGCAGTTTGCGCACAATTATCTATCTAGTCAGataacGTCACAAGTCCATCCAGTCAAATTAGAATCTCCGCGGAGGAGCGATGATAGCGTTTCAGCGGATTTGCTACGAGATCTGCAGGGCAGCAGTTTGGAAGAGTTGGCACCGCTGGCGCCGGCGGCACCATCCGCGACACCAGTTTGCGTCAAGCAGGAGCGCGCGTCTCCACCAGCAACCATGCTGGAGACGCTGGAATCGGCGCCACATCATGCCAAGAGCTCATCAATCTTGGACAGACACTTGGCAATCATGAGCACTATCGACATACCAGACTCAACTAACTTCATGCCGCTCATGTCTGTCAAAGATGAACCCTCTTCCGAAGGTGAACAACCACATCTTAGCGGTGAAGACACCAGCGACTCTTGTGGTCGTCAGACGTCCCCCGCTCCCCGCCACAGCCCCAAGAGCTGGACGCAACAGGACATGGAGCGAGCACTTGACGCCCTCAGGAAACATCAGATGAGTCTCACCAAGgCTTCAGCAACCTACGGCATTCCTTCAACAACGCTATGGCAACGTGCTCATAGACTGGGCATCGACACGCCGAAGAAAGAAGGAGCTGCTAAGTCTTGGAGTGAAGCAGACCTGCGCGGCGCTCTGCACGCGCTTAGGGCGGGTGCTATTTCTGCCAACAAAGCTAGCAAAGCTTACGTTGATTTTAATACTGTACATGCTACATAG
- Protein Sequence
- MPGYGLSQVKCEPPSDEEDSNSQFAHNYLSSQITSQVHPVKLESPRRSDDSVSADLLRDLQGSSLEELAPLAPAAPSATPVCVKQERASPPATMLETLESAPHHAKSSSILDRHLAIMSTIDIPDSTNFMPLMSVKDEPSSEGEQPHLSGEDTSDSCGRQTSPAPRHSPKSWTQQDMERALDALRKHQMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGAAKSWSEADLRGALHALRAGAISANKASKAYVDFNTVHAT*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00850545;
- 90% Identity
- -
- 80% Identity
- -