Hcor073206.1
Basic Information
- Insect
- Hymenopus coronatus
- Gene Symbol
- stc
- Assembly
- GCA_030762935.1
- Location
- CM060897.1:34436592-34466120[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.59 3.6e+04 -2.4 2.0 5 10 26 31 26 31 0.93 2 8 0.00021 13 8.6 8.4 1 11 37 47 37 48 0.97 3 8 0.42 2.6e+04 -1.9 0.4 4 10 52 58 51 58 0.87 4 8 2.3e-09 0.00014 24.4 16.7 1 19 64 82 64 82 0.98 5 8 0.61 3.8e+04 -2.5 1.0 6 10 111 115 110 116 0.77 6 8 2 1.2e+05 -7.6 13.6 10 19 129 139 118 139 0.68 7 8 9.1e-08 0.0056 19.4 12.3 1 16 175 190 175 201 0.88 8 8 1.2e-07 0.0076 18.9 15.0 1 19 207 226 207 226 0.97
Sequence Information
- Coding Sequence
- ATGGTAAGATGTAGATGTGGCAACATGGATCGTGAGATTCCATGTGTTGAACTCACCACAAAAGCAGATGATGCCAGGTGTGAGAAAAAGTGCACAAAGAAAAGATCATGTGGCAAACACAAATGCAATCAGCTGTGCTGTATTGATGTGGATCATGTTTGTCCTCTTGTGTGTAACCATCAGCTAAGCTGTGGACAACATCGCTGCGAGGAGCCCTGTCATAGGGGCCATTGCCGCCCATGTTGGCGAACCAGTTTTGAAGAGTTGTACTGTGAGTGTGGTGCCAGTGTAATAATGCCTCCGGTGCCATGTGGAACACGACGTCCTGAGTGCTCTAAGCCATGTTCTCGTCCACATTCCTGTGAACATCCAGCGCTGCATAACTGCCACAGTGAACCACAATGTCCACCTTGCACTGTACTCACACAGAAGTGGTGCTACGGAAAGCATGAGCTGAGGAAGAGTGTGCCTTGTTACATGACAGAACTGTCATGCGGGTTGCCGTGTAATGTGCCCTTGCCATGTGGACGACACAAGTGTATACTTCCTTGTCATAAGGGGCCATGTCTCAAGGAAGGTCAGATTTGTACACAGCCATGTACCAACCCGAGACCATTGTGTGGTCACAACTGTGCTGCTCCCTGCCATGATGGACCTTGTCCAGACACTCCATGCAAAGTAACAGTTAAGGTAACCTGTGAATGTGGACATCGTTCAGCAAGCAGGGCATGCTCGGACAATGCAAAGGAGTACCAGCGTGTAGCCACATCACTTCTAGCATCAAAGATGGCTGACATGCAACTGGGTCATTCTGTAGACATTGGTGACGTGCTGGGCAATCCCTCAGCAAGGAAAATGGCTCTCAAAAcGTTGGAATGCACAGAGGAGTGTCGAGTCATTGAAAGAAACCGTCGTTTGGCAATTGGCTTGCAGATTGTGAATCCTGATTTAAGTGCTAAGCTTACACCACGTTACTCTGATTTTATGCGGCAGTGGGCCAAGAAAGATCCCAACTTCTGTAACATGGTGTACGAGAAACTATGTGAACTAGTTCAATTGGCAAAGCAGTCAAAGCAGAAAAGCCGCAGTTATTCCTTTGACTCAATGAATCGAGACAAGCGCCACTTTGTGCATGAATATTGTGAGCATTTTGGATGTGAATCAGTTGCTTATGATCAGGAACCCAAACGAAATGTTGTAGCAACTGCATATAAAGAAAAGTGTTGGATGCCTGGTATGAGCCTGTTGGAAATGATACAGCGGGAGAATGGTCAACGTAAGGTCCCTAAGCCAGTATTTCATTCTTCAAGACCAACTGCAACAAGgactatggatgtgctgccaatCAAATGTTCTCCTCAGTCATCACAGCCACCCATAtctgcagcagcagcagtggcaaAACCAGCCCCAAGTTCTTCTACACCTACAACAGACTCATCAAAATCCAATGAAGAGGAGCCAGAGATAGATTATTTTGATTTCACATGA
- Protein Sequence
- MVRCRCGNMDREIPCVELTTKADDARCEKKCTKKRSCGKHKCNQLCCIDVDHVCPLVCNHQLSCGQHRCEEPCHRGHCRPCWRTSFEELYCECGASVIMPPVPCGTRRPECSKPCSRPHSCEHPALHNCHSEPQCPPCTVLTQKWCYGKHELRKSVPCYMTELSCGLPCNVPLPCGRHKCILPCHKGPCLKEGQICTQPCTNPRPLCGHNCAAPCHDGPCPDTPCKVTVKVTCECGHRSASRACSDNAKEYQRVATSLLASKMADMQLGHSVDIGDVLGNPSARKMALKTLECTEECRVIERNRRLAIGLQIVNPDLSAKLTPRYSDFMRQWAKKDPNFCNMVYEKLCELVQLAKQSKQKSRSYSFDSMNRDKRHFVHEYCEHFGCESVAYDQEPKRNVVATAYKEKCWMPGMSLLEMIQRENGQRKVPKPVFHSSRPTATRTMDVLPIKCSPQSSQPPISAAAAVAKPAPSSSTPTTDSSKSNEEEPEIDYFDFT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01447174;
- 90% Identity
- -
- 80% Identity
- -