Hcor010282.1
Basic Information
- Insect
- Hymenopus coronatus
- Gene Symbol
- -
- Assembly
- GCA_030762935.1
- Location
- CM060882.1:62610759-62616801[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-16 2.6e-13 52.2 0.0 2 45 173 217 172 217 0.95 2 2 1.4 3.2e+03 0.6 0.0 26 39 213 227 211 230 0.77
Sequence Information
- Coding Sequence
- ATGCGCTTTTTACACACATACTCATTATATGCAAACTTAGTCTTCAGCCAGTTCTCATCAGAGTCTTCACCATCACAACAAGCAACACTGCTTACTACATACACTTTCCTGGCCTCACACAAAGAAGCAAACACAGGGTTTCGCTGCTTACAATGGACCTTGATGGAGCATGGTTATCCACGTTTGGCACTGTCATCATGCCAAGCTAGTCTCTCTGTTCAAGCTTCATCAGCCTTCTGTGCACCTGAGTCTCCCTCAGCACCTTCGGGAATGCGACGGGACATCCCTCAGTATGCTGGTCACTCCTACCAAAGTCACCAAATGCTTCCAGTGTCATCATGTGCTGTCATGAGCACATATGGTGCTCCACTCCAAGCACCATCAAGCCCTTGTTCAACTTCCTGCCCTAGTCCATGTGCTAGCCCTTGTAATACTCCCTTCTTTGGTGCAGCTGTCTCTGCCACTATGGGTCAGAACTCGCCAGTGCGAAGGAAACGCAGCACCAACCCACAGGCAGATGAAAACTTCTTGCGGGCACTGGAAGCAGTTAGGTTTGGGGGCATTGGTTTCTGCAAAGCAGCTCGAATGTATGGAGTGAACAACCGCACTCTTTGGCTTGAGTATAAGAAGAGGGGTTATCCTGTAAACCGACCCAGTCTGAAGGCTCGTGTGAAGCAGGAACCATCAACTCATCCCACTTCCTCAATGCCACCTCCTCCTGCACCAAGACATCTCCAATCAAATTTAACAACACCAATCATGTGCCCCCCTCCACCACCTTCCTCGATGGTTGGGGGATTTTTGGACAGCCGACATGAGTTTACACATCCTCAGGAAACATCAGCACCTCCTCCTCAGCCTCCTCCTCAACAACACAGATCTCAGGATGACAGAGAACCTTTGAATGAACAATCTCTTAATCCACATGCAATGAATAATACTTACAGTCAGATGTAA
- Protein Sequence
- MRFLHTYSLYANLVFSQFSSESSPSQQATLLTTYTFLASHKEANTGFRCLQWTLMEHGYPRLALSSCQASLSVQASSAFCAPESPSAPSGMRRDIPQYAGHSYQSHQMLPVSSCAVMSTYGAPLQAPSSPCSTSCPSPCASPCNTPFFGAAVSATMGQNSPVRRKRSTNPQADENFLRALEAVRFGGIGFCKAARMYGVNNRTLWLEYKKRGYPVNRPSLKARVKQEPSTHPTSSMPPPPAPRHLQSNLTTPIMCPPPPPSSMVGGFLDSRHEFTHPQETSAPPPQPPPQQHRSQDDREPLNEQSLNPHAMNNTYSQM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00955493;
- 90% Identity
- iTF_01410679;
- 80% Identity
- -