Hves023032.1
Basic Information
- Insect
- Hyles vespertilio
- Gene Symbol
- -
- Assembly
- None
- Location
- HLhylVes1:27845-28933[+]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.00082 6.5 7.4 0.0 21 46 18 43 6 46 0.84 2 12 0.0011 8.5 7.0 0.0 21 46 46 71 42 77 0.88 3 12 0.0073 58 4.3 0.1 21 46 74 99 72 101 0.90 4 12 0.013 1e+02 3.5 0.0 21 45 102 126 98 129 0.88 5 12 0.018 1.4e+02 3.1 0.0 11 45 119 154 117 157 0.77 6 12 0.008 63 4.2 0.0 21 46 158 183 150 189 0.85 7 12 0.02 1.6e+02 2.9 0.0 11 45 175 210 174 213 0.75 8 12 0.008 63 4.2 0.0 21 46 214 239 206 245 0.85 9 12 0.02 1.6e+02 2.9 0.0 11 45 231 266 230 269 0.75 10 12 0.0076 60 4.3 0.0 21 46 270 295 260 301 0.85 11 12 0.018 1.4e+02 3.1 0.0 11 45 287 322 285 325 0.77 12 12 0.0079 62 4.2 0.0 21 46 326 351 318 357 0.85
Sequence Information
- Coding Sequence
- AAGAAATTTACTATAAGTGGTAATTTGAAAACACATTTACGCGTACATTCTGGTGAGAGACCATATAAATGTGATATATGTGACAAGAAATTTACTATAAGCGGTAATTTGAAAACACATTTACGCGTACATTCTGGTGAGAGACCATATAAATGCGATATATGTGACAAGAAATTTACTATAAGCGGTAATTTGAAAACACATTTACGCGTACATTCTGGTGAGAGACCATATAAATGTGACATATGTGATAAAAAATTTACTGAAAGTTGTAGTTTGAAAACACATTTACGCGTACATTCTGGTGAGAGACCATATAAATGTGATATATGTGACAAGAAATTTACAGAAAGTGGTACTTTGAAAATACATTTACGCGTACATTCTGGTGAGAGACCATATAAATGTGACATATGTGATAAAAAATTTACTAGAGGTGATTATTTGAAAACACATTTACGCGTACATTCTGGTGAGAGACCATATAAATGTGATATATGTGACAAGAAATTTACAGAAAGTGGTACTTTGAAAATACATTTACGCGTACATTCTGGTGAGAGACCATATAAATGTGACATATGTGATAAAAAATTTACTAGAGGTGATTATTTGAAAACACATTTACGCGTACATTCTGGTGAGAGACCATATAAATGTGACATATGTGACAAGAAATTTACAGAAAGTGGTACTTTGAAAATACATTTACGCGTACATTCTGGTGAGAGACCATATAAATGTGACATATGTGATAAAAAATTTACTAGAGGTGATTATTTGAAAACACATTTACGCGTACATTCTGGTGAGAGACCATATAAATGTGATATATGTGACAAGAAATTTACAGAAAGTGGTACTTTGAAAATACATTTACGCGTACATTCTGGTGAGAGACCATATAAATGTGACATATGTGATAAAAAATTTACTAGAGGTGATTATTTGAAAACACATTTACGCGTACATTCTGGTGAGAGACCATATAAATGTGATATATGTGACAAGAAATTTACAGAAAGTGGTACTTTGAAAATACATTTACGCGTACATTCTGGTGAGAGACCATATAAATGTGATATATGA
- Protein Sequence
- KKFTISGNLKTHLRVHSGERPYKCDICDKKFTISGNLKTHLRVHSGERPYKCDICDKKFTISGNLKTHLRVHSGERPYKCDICDKKFTESCSLKTHLRVHSGERPYKCDICDKKFTESGTLKIHLRVHSGERPYKCDICDKKFTRGDYLKTHLRVHSGERPYKCDICDKKFTESGTLKIHLRVHSGERPYKCDICDKKFTRGDYLKTHLRVHSGERPYKCDICDKKFTESGTLKIHLRVHSGERPYKCDICDKKFTRGDYLKTHLRVHSGERPYKCDICDKKFTESGTLKIHLRVHSGERPYKCDICDKKFTRGDYLKTHLRVHSGERPYKCDICDKKFTESGTLKIHLRVHSGERPYKCDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00820297;
- 90% Identity
- iTF_00820297;
- 80% Identity
- iTF_00820297;