Hves023033.1
Basic Information
- Insect
- Hyles vespertilio
- Gene Symbol
- -
- Assembly
- None
- Location
- HLhylVes1:27818-28933[+]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.01 79 3.9 0.0 24 46 2 24 1 30 0.88 2 13 0.0014 11 6.6 0.0 21 46 27 52 23 55 0.89 3 13 0.0011 8.8 6.9 0.0 21 46 55 80 51 86 0.88 4 13 0.0048 38 4.9 0.1 21 46 83 108 79 114 0.88 5 13 0.01 82 3.8 0.0 21 46 111 136 107 142 0.87 6 13 0.017 1.3e+02 3.2 0.0 11 46 128 164 127 170 0.77 7 13 0.0082 65 4.2 0.0 21 46 167 192 159 198 0.85 8 13 0.021 1.6e+02 2.9 0.0 11 45 184 219 183 222 0.75 9 13 0.0082 65 4.1 0.0 21 46 223 248 215 254 0.85 10 13 0.019 1.5e+02 3.0 0.0 11 45 240 275 238 278 0.77 11 13 0.0082 65 4.1 0.0 21 46 279 304 271 310 0.85 12 13 0.017 1.3e+02 3.2 0.0 11 46 296 332 295 338 0.77 13 13 0.0081 64 4.2 0.0 21 46 335 360 327 366 0.85
Sequence Information
- Coding Sequence
- AAACCATATAAATGTGATATATGTGACAAGAAATTTACTATAAGTGGTAATTTGAAAACACATTTACGCGTACATTCTGGTGAGAGACCATATAAATGTGATATATGTGACAAGAAATTTACTATAAGCGGTAATTTGAAAACACATTTACGCGTACATTCTGGTGAGAGACCATATAAATGCGATATATGTGACAAGAAATTTACTATAAGCGGTAATTTGAAAACACATTTACGCGTACATTCTGGTGAGAGACCATATAAATGTGACATATGTGATAAAAAATTTACTGAAAGTTGTAGTTTGAAAACACATTTACGCGTACATTCTGGTGAGAGACCATATAAATGTGATATATGTGACAAGAAATTTACAGAAAGTGGTACTTTGAAAATACATTTACGCGTACATTCTGGTGAGAGACCATATAAATGTGACATATGTGATAAAAAATTTACTAGAGGTGATTATTTGAAAACACATTTACGCGTACATTCTGGTGAGAGACCATATAAATGTGATATATGTGACAAGAAATTTACAGAAAGTGGTACTTTGAAAATACATTTACGCGTACATTCTGGTGAGAGACCATATAAATGTGACATATGTGATAAAAAATTTACTAGAGGTGATTATTTGAAAACACATTTACGCGTACATTCTGGTGAGAGACCATATAAATGTGACATATGTGACAAGAAATTTACAGAAAGTGGTACTTTGAAAATACATTTACGCGTACATTCTGGTGAGAGACCATATAAATGTGACATATGTGATAAAAAATTTACTAGAGGTGATTATTTGAAAACACATTTACGCGTACATTCTGGTGAGAGACCATATAAATGTGATATATGTGACAAGAAATTTACAGAAAGTGGTACTTTGAAAATACATTTACGCGTACATTCTGGTGAGAGACCATATAAATGTGACATATGTGATAAAAAATTTACTAGAGGTGATTATTTGAAAACACATTTACGCGTACATTCTGGTGAGAGACCATATAAATGTGATATATGTGACAAGAAATTTACAGAAAGTGGTACTTTGAAAATACATTTACGCGTACATTCTGGTGAGAGACCATATAAATGTGATATATGA
- Protein Sequence
- KPYKCDICDKKFTISGNLKTHLRVHSGERPYKCDICDKKFTISGNLKTHLRVHSGERPYKCDICDKKFTISGNLKTHLRVHSGERPYKCDICDKKFTESCSLKTHLRVHSGERPYKCDICDKKFTESGTLKIHLRVHSGERPYKCDICDKKFTRGDYLKTHLRVHSGERPYKCDICDKKFTESGTLKIHLRVHSGERPYKCDICDKKFTRGDYLKTHLRVHSGERPYKCDICDKKFTESGTLKIHLRVHSGERPYKCDICDKKFTRGDYLKTHLRVHSGERPYKCDICDKKFTESGTLKIHLRVHSGERPYKCDICDKKFTRGDYLKTHLRVHSGERPYKCDICDKKFTESGTLKIHLRVHSGERPYKCDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00820297;
- 90% Identity
- iTF_00820297;
- 80% Identity
- iTF_00820297;