Hves019983.1
Basic Information
- Insect
- Hyles vespertilio
- Gene Symbol
- -
- Assembly
- None
- Location
- HLhylVes1:1901866-1902440[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.4 2.9e+03 -1.5 0.1 35 44 10 19 9 19 0.84 2 2 3.7e-12 2e-09 37.4 0.0 3 39 23 60 21 63 0.91
Sequence Information
- Coding Sequence
- ATGGCGGACGACTTAGATGGGATGCCACGACATTACCAAAGGAAGACTGAGACCAAATACAAATTAGAAGATTTAGAAAAAGCCGTTCACGATGTCAGGAACAAAATACTGTCGTTAGGGAAGGCAGCTATTACTTATTCTGTTCCAAAAAGTACTATACATGACTATCTCAAGAAAGAAATTATAAATGAACCAAAAACTGGAAGAAAAGCTATATTTACTGACGCACAAGAAAAAGAATTAGAACAACATATCATTCAGTGCAGCAAAATATTTTATGGTTTAACAATAGAGATGGTGCGAAAAATAGCATTTAAATTTGCAGAAGTGAATCAATTGAAGCATAATTTTGATAAAACATCACAAATGGCAGGAAAAGACTGGTTCTATGGATCAACAATTTAG
- Protein Sequence
- MADDLDGMPRHYQRKTETKYKLEDLEKAVHDVRNKILSLGKAAITYSVPKSTIHDYLKKEIINEPKTGRKAIFTDAQEKELEQHIIQCSKIFYGLTIEMVRKIAFKFAEVNQLKHNFDKTSQMAGKDWFYGSTI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00398805;
- 90% Identity
- -
- 80% Identity
- -