Hfas016224.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hylaea fasciaria
Gene Symbol
-
Assembly
GCA_905147375.1
Location
LR990196.1:2168151-2176209[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 0.0048 0.33 11.7 2.4 2 23 207 229 206 229 0.97
2 28 0.00041 0.027 15.1 0.4 2 21 258 277 257 278 0.93
3 28 9.8e-05 0.0066 17.0 0.2 2 23 310 332 310 332 0.96
4 28 0.0008 0.054 14.1 0.2 1 23 393 416 393 416 0.97
5 28 5.9 4e+02 2.0 0.0 1 20 433 452 433 453 0.86
6 28 0.00066 0.045 14.4 1.3 2 23 496 517 495 517 0.96
7 28 0.0002 0.013 16.1 3.6 2 23 554 576 553 576 0.97
8 28 0.00018 0.012 16.2 1.3 1 23 626 649 626 649 0.97
9 28 0.00044 0.029 15.0 0.1 1 23 706 728 706 728 0.97
10 28 0.00088 0.06 14.0 6.3 1 23 739 761 739 761 0.97
11 28 0.054 3.7 8.4 1.6 2 23 773 794 772 794 0.96
12 28 0.0037 0.25 12.0 0.9 1 23 804 826 804 826 0.98
13 28 0.044 2.9 8.7 4.2 1 23 854 876 854 876 0.96
14 28 0.0015 0.1 13.3 5.5 1 23 887 909 887 909 0.98
15 28 9.6e-06 0.00065 20.2 0.8 1 23 917 939 917 939 0.99
16 28 0.00017 0.012 16.2 0.6 2 23 959 981 958 981 0.97
17 28 0.13 8.8 7.2 4.6 1 23 1028 1050 1028 1050 0.98
18 28 0.038 2.5 8.9 0.6 2 23 1061 1083 1060 1083 0.94
19 28 0.0037 0.25 12.1 0.2 2 23 1106 1127 1105 1127 0.95
20 28 6.3 4.2e+02 1.9 3.6 2 23 1170 1192 1169 1192 0.95
21 28 0.013 0.9 10.3 0.1 2 23 1208 1229 1207 1229 0.93
22 28 0.011 0.74 10.6 1.8 3 23 1237 1257 1235 1257 0.94
23 28 0.0063 0.42 11.3 0.9 2 23 1268 1290 1267 1290 0.95
24 28 0.014 0.92 10.3 1.2 2 23 1307 1325 1307 1325 0.96
25 28 0.027 1.8 9.3 1.3 2 21 1329 1348 1328 1349 0.93
26 28 0.39 26 5.7 1.9 2 23 1398 1419 1397 1419 0.93
27 28 0.0018 0.12 13.0 0.2 2 23 1430 1452 1429 1452 0.95
28 28 1.2 79 4.2 0.4 3 23 1469 1486 1468 1486 0.78

Sequence Information

Coding Sequence
ATGGCCCTCAAACTCGGAAAATGCAGGCTATGCCTCAAGCTCGGTGACTTTTACTCGATCTTCACGATTGACAATGCCGTGCAACTCTCGGAGATGGTTATGGAGTGCTCTAGGATAAAAGTGTACGAAGGAGATGGGTTGCCTGATAAAGTTTGCTCTGAGTGCATACAAAAGCTGAGCAGCGCATACATATTCAAGCAGCAATGCGAGAGAGCTGACCAGGAGTTACGACGGAACTATGTCCCGCCTCCTGGATTCAGTATTAGTCCACCGCCACCAAACAGGCAGAGCAGCGATTCAGCCTTTTCGACACACACAGATAGCTCCAACTTGAAATCGTCTTTTATCGAAAGCAAAGTCACTCCGGTCAACAGAAGTCGGAAAAGAAGTGTTGAAAGCGACAATGCGTCTGAAGCCAGCCGGTCGCTGGACCGCGGCCGGCCGAGCAGCTCCAAGCGCGTGGAGGAACTGAGGAGATCGCAGAAACGGCCGCGCCTGTCCGCGAGCACCCACAACTCGCAGTGTGACTCGGACTACGAAGACAACGGAGGCTCTAGCTATGTTCCTGATACCGATATGGATGACTCTGACGAACCGCTCATCAAGCCGGAGGAAAACAAGTGCGAATTCTGCTCTAAAACCTTCAAATGGAAAAAAACCTTAAAGGCCCACTTGAACAAGGTGCATGGTAAGAAAGCAAGCCTAACCGAAGCAGCGGTAGCTACTCCTAAAACACCTATTAATGAATATATCGACGAAGAAGAGAAAGTGAGCTGCAATAGATGCGGAAAAACCTTTAAATTACAGATCATGTTGAAAAGACACCAGGAATCGTGCGGAAAGACGCCCGTTAAGTCGCCCCAGAAGGAGTTATTTATCTCTCTGGAACCGATCGACGCGGTGCATAAGATTACGGTCAAAAAACCCGTATGCGAATACTGCACAGCCAAGTTTAAAAATGTAGAAAATCTAGAGAAGCATCTGAGAGTAGTTCATGCGGCGGTTCTGAAAAAAGAGCAAAAGGAAGCGAAGCTACTGGCCGTTGAGAGCTCGAAGACCAAAGACAACTCTGATGCTTTTTCCATTCCATGCATTTATTGTAAGAAACCGTTCGACGACTACTACGTGCACAGCTCGCACTTCAGTATCTGCCCGAAGAAGGACTCGCGCACGGTGTTCGAATGCCCTATCTGTCAGAAGGTGGCGAGCCGTAAGAACGGCTATTTCATCCACATTAAGAATATCCACTTCGAGCGGGCGAGCAAGCCCGCGGAGGCGTCCACCTCCTCGGCCTCCTTCGAATGTCGCATATGCAGCAAGAAACTGCTCTCCCAAGAGATGCTAGTCATGCACCTGGCGGCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGAGGCCAAGCACGGCGGAAGACTGCGCGTCCGTGCGTTCGGGCTCCAGCGCGCCCGCGGCCGGGGAGCTGAAGTGCCGCGTGTGCGACAAAGAGTTCAAATACCGGAAGTCGCTGGCCTCGCACGAGCTCAAGCACACGGACGACGAAGTCAGAGTGAAGCGCGAACCGCCCGACTTACTCCGCGAGACCGACAGGGACTCGGAATTCGAATCTAGTCAAGACGACGAAGACGCCGACGATCTCACCTGCGACATCTGCGAAAAGATGTTCTCCTACAAACGTTTGCTCTTGCACCACAAGAGGACGAAACATAACATGTCTTCGGGCACTAAACGAGCGAAAATAAACCTTAAAGACTGCTCCGTGAAGTGCCTGCTGTGTGATTTGGAAATGAAAGTTGGCACCATCAATGAGCACAATCAGAAGCACATTTCCATGAACATCAAGCCGAGGAATATCTACACTTGTGCAGAGTGCGCACAGAAGTTCAAGAGTTGCAGCAATTTGGCGAATCACATCAAACTTGTACACAGGTTAAAGCAGCACCAGGACCAGGTGCCGCAGCAGTTCATCGGCGCGGACCTGGCGGATTTTTGTGAGGTCGTTGTGACGAAGGCGGAACCCCTGGATGACATCCAGAGTCACAACGGCTTTGGCGAGGTTCCGTCGCAGGGGGCTCCGATGGTGGATCTGAGCGGCTTCACATGCCCCATATGCGGTAAGAAGATGCCGACCTTGATCTCGCTCAAGCGGCACGTGAACTGGCACTCGTACGTCGGTAACAACCTAGAGAAGAAACACGAATGCTTCGTCTGTAAAGAGACATTCAAATTCCAAAGTCACTACAAAATGCACATGCGGGCCCACTACACCGACACCAACCTGGACCCGGCGCTGCTCACCTGCTCCGTGTGCAACCGGCGCAGCAAGCACCTCCGCGCGGCGCAGGCGCACATGAACTACCACAAGCAGACTCGCTTCCAGAACAAGGACTACCAGTGCTCCATCTGCAAGCGCGTGTTCCAGTACCGCCGCGTCTACCTCTCCCACATGGCCATCCACTACAAGAAGGGCGAGAGCGCTATGAACACGGTCGTGGGGGATATGATACCGAACAGCTCCAAAGCCTCCCTCGACGGCACCCACACGTGCCAGCTGTGCAGCAAAGTCTGCGACTCGGAAGTGTCCCTCAAGCACCATCTGATCTGGCATCGGTCCAAGACGCTGCTGTACGGCGCGCGGCACGAGTGCCGGGTGTGCCAGCTGCAGTTCACCAACAAGCGGCACCTGGAACTGCACACGCGCACCCACTACGAGGACGAGAACGGGCCCTACAAGTGCACCGTCTGCGGCAAGGGGTACACCGACGAGGACTACATGAAGCGGCACGTGAAAAGCCACAACTTCGATCACATGTCGCACAAGAAGCGGATCGAGAAGCTGCGCAAGGACAAGGTGAAGTGCCCGATCTGTTCGCGGTACTACCCGGACCTGGTGCACCTCATCCGGCACCTGCGCCGGACGCACCCCGAGAGCAAGATGATCAAGGAGGACCCCGACGCGCCGCCGCCCGCGTACTTCTCCTGCAAGCTGTGCGCCAAGGTGTTCCTGGACGCGGCGCGGCTGCGGTGCCACGAGGCGGCGCATCTCCGCAAGCCCAACTTCTTCAAGTGCAAGTTCTGCGGGAAGAAGACCATCTCGCTCAAGAACCACAACCTGCACATCAAGTCCCACCTGACCACCAAGCACGTGGCGGCGCCGCTGCAGTGCCCGCGCTGCGACCAGGCCTTCGTGCTGGGCTACGGGCTGCACCACCACCTGCGGGACGCGCACGGCGTGCGGGAGACCTGGATCGCCGAGCGCGGGGACGAGGCCCTGGCGGGGCCGCTGCGGGAGCTGCAGTGCTCCGTGTGCCTCAAGGTGCTGGCCAACAAGGGCAACTTCGAGCGCCACCTCGACTACCACAACACGCTCCGCTGCAACTACTGCTTCGACTACTTCGGCGGCCTGCGCTTCCTCGAGGGCCACCTCGCCTTCAGCTGCGACAAGAGACGCCTCGTCGGGGACACGGAGGTGCACCCGCGCCGCATCAAGTGCGAGCTGTGCTACAAGCCGTTCCACGTGCAGGTGAAGCTGGACTGCCATCTGCGCACGCGGCACGACATCAAGGTGGACCGCCGCGCCGCCAAGGGCACCACGGAGACCGTCTGCGACTACTGCTTCAAGGTGTTCGAGAACGAATACGCGCTCGCCGGCCACAGAGTGTACCACCGCACCGTCGGCTACTACGGCTGCCTCTACTGTCCGCGCAAGTTCAACACGCCGGCCGCCTACCGCAAGCACAAGACGCACCACTTCTCGCAACTGAACGTCGACGAGCCGACCAAGTGCGAGCACTGCGACGAGACCTTCGTCGCCTTCCGGGAGTTTATCTACCACATGCGCGACGCGCACGGAGACGACAAGGAGTGGATCGTGCTGCCCAAGGACTCCGTCGAGGAGAAGTGTCCGCTCTGCGACAAGGTGTTTTTCAACCTGCAGCGCCACCTGCAGTACCACGAAGAGAACAAGTGCAAGAAGTGCGGCGAGTACTTCCGGTCGCGCGCCGACTTCGACGACCACCTGTGCGCCATCGAGAGCGACGCGGAGGGCGAGGCCCGCGACGCCGCGGCGCTCGACCGCCCCTACGAGGAGTGCACCTTCTGCTTCAAGCCGATCACCAAGAAGGACTCGAAGAAGAAGCACGACATCCTGCACCGGACCTCCGGCGCGATCTCGTGCCGCTTCTGCCACCTCAAGTTCAAGACGATCGACGCGTTCAACATCCACGCCTTCTCGCACCGCAGCCGGAAGTACGTGAAGAGGCCGATCAAGTGCCGCGAGTGCGGCGAGCGGTTCGTCAAGTACGGCCCGTTCATGCGGCACATGAAGGCGGCGCACGCGTCCACCAAGAAGGTGCACTACCGCGCCGCGGTGCGGGCGGAGCCCTGCGCGCTGTGCGGCCGGGCCTTCCCCAACCTGCACAACCACTACCGCGCGCACCTCGCCAACCGCTGCCGCGCCTGCCGCAAGTACTTCGCGTCCTCCCGCCTCGCCGCGCGCCACGAGTGCGGCCGCGAGGACGCCGAGCCCGACAAGGTGTTCGTCTCGGACGTGGACCTGGCCGCGCTCATCGACGCCTACGTGCCGCGGGACGAGAGAGACGACGAGAAGTTCTACGGGTACACGGACGACGAGGACGAAGCGGAGGCGGAGTCGGCGACGCCGCCCGCGCCGAGGGTCGTCGAGACGCCGACGCGGCCGCCGATCGACGAGCAGCTGGCCGAGGACGAGCGCAATCTGCACATGATGGTGGTGTCGCCGATCATCTCCGACGTGCTCTCGCTGTACCAGAAGACGGAGAAGGACCCGGACGACGAGGTCGTGGATCTCGCCGACGACGACTCTTTGGACGCGATCGATGTAGACGCGCCCGTCGTGGTTATAGATGATTCCAGCTAA
Protein Sequence
MALKLGKCRLCLKLGDFYSIFTIDNAVQLSEMVMECSRIKVYEGDGLPDKVCSECIQKLSSAYIFKQQCERADQELRRNYVPPPGFSISPPPPNRQSSDSAFSTHTDSSNLKSSFIESKVTPVNRSRKRSVESDNASEASRSLDRGRPSSSKRVEELRRSQKRPRLSASTHNSQCDSDYEDNGGSSYVPDTDMDDSDEPLIKPEENKCEFCSKTFKWKKTLKAHLNKVHGKKASLTEAAVATPKTPINEYIDEEEKVSCNRCGKTFKLQIMLKRHQESCGKTPVKSPQKELFISLEPIDAVHKITVKKPVCEYCTAKFKNVENLEKHLRVVHAAVLKKEQKEAKLLAVESSKTKDNSDAFSIPCIYCKKPFDDYYVHSSHFSICPKKDSRTVFECPICQKVASRKNGYFIHIKNIHFERASKPAEASTSSASFECRICSKKLLSQEMLVMHLAAXXXXXXXXXXXXXXXXXSRPSTAEDCASVRSGSSAPAAGELKCRVCDKEFKYRKSLASHELKHTDDEVRVKREPPDLLRETDRDSEFESSQDDEDADDLTCDICEKMFSYKRLLLHHKRTKHNMSSGTKRAKINLKDCSVKCLLCDLEMKVGTINEHNQKHISMNIKPRNIYTCAECAQKFKSCSNLANHIKLVHRLKQHQDQVPQQFIGADLADFCEVVVTKAEPLDDIQSHNGFGEVPSQGAPMVDLSGFTCPICGKKMPTLISLKRHVNWHSYVGNNLEKKHECFVCKETFKFQSHYKMHMRAHYTDTNLDPALLTCSVCNRRSKHLRAAQAHMNYHKQTRFQNKDYQCSICKRVFQYRRVYLSHMAIHYKKGESAMNTVVGDMIPNSSKASLDGTHTCQLCSKVCDSEVSLKHHLIWHRSKTLLYGARHECRVCQLQFTNKRHLELHTRTHYEDENGPYKCTVCGKGYTDEDYMKRHVKSHNFDHMSHKKRIEKLRKDKVKCPICSRYYPDLVHLIRHLRRTHPESKMIKEDPDAPPPAYFSCKLCAKVFLDAARLRCHEAAHLRKPNFFKCKFCGKKTISLKNHNLHIKSHLTTKHVAAPLQCPRCDQAFVLGYGLHHHLRDAHGVRETWIAERGDEALAGPLRELQCSVCLKVLANKGNFERHLDYHNTLRCNYCFDYFGGLRFLEGHLAFSCDKRRLVGDTEVHPRRIKCELCYKPFHVQVKLDCHLRTRHDIKVDRRAAKGTTETVCDYCFKVFENEYALAGHRVYHRTVGYYGCLYCPRKFNTPAAYRKHKTHHFSQLNVDEPTKCEHCDETFVAFREFIYHMRDAHGDDKEWIVLPKDSVEEKCPLCDKVFFNLQRHLQYHEENKCKKCGEYFRSRADFDDHLCAIESDAEGEARDAAALDRPYEECTFCFKPITKKDSKKKHDILHRTSGAISCRFCHLKFKTIDAFNIHAFSHRSRKYVKRPIKCRECGERFVKYGPFMRHMKAAHASTKKVHYRAAVRAEPCALCGRAFPNLHNHYRAHLANRCRACRKYFASSRLAARHECGREDAEPDKVFVSDVDLAALIDAYVPRDERDDEKFYGYTDDEDEAEAESATPPAPRVVETPTRPPIDEQLAEDERNLHMMVVSPIISDVLSLYQKTEKDPDDEVVDLADDDSLDAIDVDAPVVVIDDSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01172591;
90% Identity
-
80% Identity
-