Hfas015969.1
Basic Information
- Insect
- Hylaea fasciaria
- Gene Symbol
- -
- Assembly
- GCA_905147375.1
- Location
- LR990220.1:4310007-4312406[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.024 59 4.0 1.4 18 43 7 29 2 34 0.83 2 20 0.17 4.3e+02 1.2 0.2 18 44 35 58 31 58 0.82 3 20 0.0001 0.25 11.5 0.1 18 43 66 88 65 89 0.95 4 20 7.3e-05 0.18 12.0 0.9 17 43 96 119 94 120 0.90 5 20 0.0018 4.7 7.5 0.3 18 44 127 150 121 150 0.91 6 20 0.00019 0.48 10.6 3.2 14 43 153 179 151 180 0.88 7 20 0.00062 1.5 9.0 3.0 18 44 186 209 181 209 0.92 8 20 1.5e-05 0.039 14.1 0.4 13 43 238 265 232 266 0.90 9 20 0.64 1.6e+03 -0.6 0.8 12 22 290 300 285 319 0.70 10 20 1.8 4.6e+03 -2.1 0.5 14 23 322 331 307 343 0.63 11 20 0.18 4.6e+02 1.1 0.0 15 27 352 364 348 378 0.78 12 20 0.15 3.7e+02 1.4 5.2 16 43 400 424 395 425 0.87 13 20 0.16 3.9e+02 1.3 7.8 7 29 420 442 416 459 0.72 14 20 0.0003 0.75 10.0 2.8 13 43 455 482 447 483 0.78 15 20 0.048 1.2e+02 3.0 0.6 18 44 489 512 484 512 0.75 16 20 2.4 6e+03 -2.5 0.7 18 28 519 529 515 538 0.81 17 20 0.42 1.1e+03 -0.1 0.1 33 43 561 571 548 572 0.79 18 20 2.9e-05 0.073 13.3 0.1 17 43 616 639 604 640 0.87 19 20 4.2 1.1e+04 -3.3 0.1 14 27 656 669 652 681 0.80 20 20 0.86 2.2e+03 -1.1 1.1 12 27 684 699 675 700 0.77
Sequence Information
- Coding Sequence
- ATGTCGCAAGGAGACTTCATTTGCGACTACTGCAGCCGCTCCTTCACTAGAAAGTACAACCTCCAGACGCACATCGAAAACTATCACGTCAACTCTACATGCTACTGCGAAATTTGCGACCAAAAATTCGGGAGCCCCAGCGGCCTGCAGCTACATCTCTCGCGAGGGCACAACCGATTTGGCCAGCCGCTCCCCGAGTGCGATATCTGCGGACGCATATTCACCAGAAAACAAAACATTATGTCCCACATGATCACCGTGCACCTACAAGGCGTCGGGCCGGAAATACGGTGCCGAGTCTGCGGGAAGACTTTCACCACAGAAAGGAATCTGAAAAGACATATCAAGCTGTTGCACAACCCTGATCTCCAGTACCCTACCTGCGATGATTGTCACAAGTCGTTCAAAAGCAAACATTCGCTGATAGCTCACATGCAGGCCGCCCACAACTGCAACGACAACTCTATAAAATGCTACGTGTGCGAGAAGGTGTACACTAATAATCGGAACTTGAAGCGGCATATCGAAATGTTGCACGGGGAGAAGGAAGACCACAGATGCCATATCTGTCCTAAAGTTTACACCTCTAATCAGAGCCTCAAGCGGCACATTAAGACTGCGCACAATTTCGATGAAGACAGCATCAAATGCGAGGTGAAATTGGAAACGGAGAACATAGACTGGCATAGCGACAATTCGGATGATACGTATGAATCCAATACGATCACTTGCGAGGTTTGCAACGAAGCTTTCAGCGAAGAGTCCTGCCTGCGCCAACATGTAAAGAAGGAGCATACGTTCGATGCCTTCTATGATTACTGCAAAAGCTATCTGCTTAGACAGGCGGATGTAGATCAAGCAGAGACGAACAAGCGCACGGTTTACAAATGTGAGTTCTGCTTCACGGGCTACTTCGACGTGTACGAGCTGAAAGATCACATGAAGGTGAACCACGATACGGATTACAACTTGTCCACATGCAACGTGTGTTTCAGCAAGTTCTTCAGCAAGGAAACCTTGACAGAGCACAAGAAGATATGCCTCCCACCGCCCAACGTGAACTCGTGCAGCCACTGCGACAAATTGTTCACTGACATATCCAGTTTGGCGTTCCACACGAGAATTTTCCATCCGCAAGCGCAACTCGCCGATTCTCACATAACTTCGACGAGATCCGACTACGTCGCCGTCCAGAGCTCCTTCAAGTGCGAACACTGCAATCGTTTGTACTATAGCGACAGGTCGTTGAAGCATCACATCAAGCTGAAACACACGACCGACGAGGCGGTCGAGTGCGTGTTCTGCAACAAAATCTGCAGCAACAAATATTATCTCGCGTCGCATATCAAAATCGTCCACAGCATCGAAGATCTCTCCAAATGTGACTATTGCGAGAAACAGTTCAAGTCCAAGCGTAATATCAGGAGACACATCGAGTACACGCACATGGGAATGCAAAGGTATAAATGTGTCGAATGCGAGACACTTTTCAAGGAAAAGCGCAGTCTCAGGAAACACGTACGGACAAAACATCCCAACTCTGCATCGTTTCCGCAATGCCACATCTGCTACAAGAGATTCGAATCGGCAAAGTCATGTAAAATACATCTGAAGTTACTGCACTCTTTCAATATGAACACGTATCCTTGCGATCTGTGTTCCGTGTCGTTCGGATCGAAAGAGACTCTCAAAATACATTTGGAGTCCAAACACTTGGCGGAGGACGAAATATACAAATGCGAAGAGTGCAACCTGATCTTCCAGGGGACTCAAAGGTTCGAAGAGCACAACGAGGCGAGCCACGCCACTATCGACGCTGTGCCGAAGCAAAAAGCACAGACACTGCCCCGTTGTGTGATTTGCATGAAAGACTTCAGCACGCGTAAGACATTGCGACGGCACATCAAGAAGTTCCACGAGGAGTTCCAAGCGGAGGAGCTCGCTAACTTCGGTTTCAGGAAGCGAAACTTCATAGTCGATTGCGAAGACTGTCTCAAGAACTTCGCAGACGATTACTACGTGAACGCATATCACAAAGTGAAACATTTGAAAGACTCTGTGGTTTTCAAATGCGAGACTTGCCATTCTGCTTACAAGTGTATAGAGTTCGCAGTCCAAAGACATAGGATCGCAAACTTTGATACGAGCAAGCCTAAATTAATGTTGAGCGATCTCTGCACCACTCATCTGAGTGGAGACGAGGCGACCTATTCAGGGTTCGGCTCTTTGCATGAATATATGGAACCGGAGAGCACCACTGCCGAAGTCAAGATAGAACCGAGCGATGGCATGGTACCAGATCAGACGGATGAAATGAAAATAGAACCTGTGTCTTCGGAATTTGCCCCGGATGAGGTTAAATTGGAGCCGGAATGTATCTATAAGATTTCCAGCACTTGA
- Protein Sequence
- MSQGDFICDYCSRSFTRKYNLQTHIENYHVNSTCYCEICDQKFGSPSGLQLHLSRGHNRFGQPLPECDICGRIFTRKQNIMSHMITVHLQGVGPEIRCRVCGKTFTTERNLKRHIKLLHNPDLQYPTCDDCHKSFKSKHSLIAHMQAAHNCNDNSIKCYVCEKVYTNNRNLKRHIEMLHGEKEDHRCHICPKVYTSNQSLKRHIKTAHNFDEDSIKCEVKLETENIDWHSDNSDDTYESNTITCEVCNEAFSEESCLRQHVKKEHTFDAFYDYCKSYLLRQADVDQAETNKRTVYKCEFCFTGYFDVYELKDHMKVNHDTDYNLSTCNVCFSKFFSKETLTEHKKICLPPPNVNSCSHCDKLFTDISSLAFHTRIFHPQAQLADSHITSTRSDYVAVQSSFKCEHCNRLYYSDRSLKHHIKLKHTTDEAVECVFCNKICSNKYYLASHIKIVHSIEDLSKCDYCEKQFKSKRNIRRHIEYTHMGMQRYKCVECETLFKEKRSLRKHVRTKHPNSASFPQCHICYKRFESAKSCKIHLKLLHSFNMNTYPCDLCSVSFGSKETLKIHLESKHLAEDEIYKCEECNLIFQGTQRFEEHNEASHATIDAVPKQKAQTLPRCVICMKDFSTRKTLRRHIKKFHEEFQAEELANFGFRKRNFIVDCEDCLKNFADDYYVNAYHKVKHLKDSVVFKCETCHSAYKCIEFAVQRHRIANFDTSKPKLMLSDLCTTHLSGDEATYSGFGSLHEYMEPESTTAEVKIEPSDGMVPDQTDEMKIEPVSSEFAPDEVKLEPECIYKISST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01209552;
- 90% Identity
- iTF_00818509;
- 80% Identity
- iTF_00818509;