Basic Information

Gene Symbol
-
Assembly
GCA_963513945.1
Location
OY740716.1:124232709-124239295[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.11 9.1 7.8 0.7 1 23 1534 1557 1534 1557 0.91
2 12 2 1.7e+02 3.8 1.0 1 23 1716 1738 1716 1738 0.93
3 12 0.00051 0.044 15.1 2.2 2 23 1741 1762 1741 1762 0.97
4 12 3.7e-05 0.0032 18.7 0.2 3 23 1770 1790 1768 1790 0.98
5 12 7.5e-06 0.00065 20.9 5.8 2 23 1797 1818 1796 1818 0.97
6 12 8.6 7.4e+02 1.8 0.1 5 23 1831 1849 1830 1849 0.96
7 12 0.071 6.1 8.4 0.1 2 23 1888 1908 1887 1908 0.96
8 12 9e-05 0.0077 17.5 0.4 1 19 1914 1932 1914 1936 0.95
9 12 5.1e-06 0.00044 21.4 1.8 1 23 1944 1966 1944 1966 0.99
10 12 0.00018 0.015 16.5 6.5 1 23 1972 1994 1972 1995 0.96
11 12 0.0011 0.093 14.1 6.4 1 23 2000 2022 2000 2022 0.99
12 12 0.0028 0.24 12.8 6.0 1 23 2028 2050 2028 2051 0.96

Sequence Information

Coding Sequence
ATGGGCGAGAACATGCAGTGTCCGGTATGCACGTTATACCTGCATGCTGGTATGTCCCTTTCTGATCACTTGGAAACACACCCAAAAGAGCAAGTGATTAAAGCTCTAGTACAAATGACCATTTCTGGGGTGGGAGGTGGTTCAGCAACTTTGGCATCAGTGTTAAAGGGCGACAGTAGTGCGGTTGATGTAAAGAAATCCATACAAGAGCCGGAAGATAAATCGTTGGCGGGTGATAAAAGTAATGATGTAAACGCTAGCAGTGCAAGTGCTAGCAGTTCTGCTAGTAACTGCTCACTTTCTAACCAAAGTTCTATCAGTAGCCAAAATTCAAACCatgttttaaatttctcaaaCGCACATATCGATGATAACAGCGGATCTGAACCCTCGTCACAGGCCCAATTGTCATTAAAGTCGAACGAAAGATCTGTCACGAGCAACAAGGAATTGGCgtcaaaagaaaatacaaacgaTAGTTTCAGTAGTGTTTCTCGGACATACTCGAGTTCGACAGCTGAGTTGGCCAATGTAAATAACAATTTTGCAGCTTTTGCCAATCAACGCTACCATCAACAGCAACAGCGCAGCGTGGGTAGTCAACCACTCCAGTTAAACACTCCATCGCAAATGCCCCCACCACCAGCTCCACCAGGGCAGCATCCAGAAATGACTCGTGCTAATTTGCCACCACCTTCACTTTCTCAATCAATGTCATCTCAGTCCATCTCATCAGGATTTCATTCACTACAGTCTCAACAATTGCCACATCCTCAGCCACCACATCATAGTTCACATATAAGTAATATAACCAATAGTCACGGTCGGCAGTCACATATGTTCGCCAGCCAACATCAACAGCCCCCTCCACCTCCTCAACATCAACAGGATATCAAGGTTATATATTCTTCAAGTCTACCTCCACCTCCTCCTCTACAGCTTTTTAGCTATCAGCCGCCATCCCAGCTACATCATCACCAAAAACCTCCACCGGCGTATGGCACAGCTATTAGTCAAATTCGATctcaaaacaatcaaaataaaaatcaaCAGCAACAGATGCAGCAGCAACAAGCGATACACCATCATAATTTACGTATCCATGGTGCAGGACCCCCATCATCTCAGATAGCCACAAAACAGTTATTTTCTTCCAAAACGGAAGACGTTCAGCATTCAGCATCGTCGCCTGAAGCGTCCCATGCTTCAAGACAAATTAACAATAATCACCAGcatcaaaacaaatattttttaaatcagcatCTGCAGAATTCCGATGTGGAAAATCATACACATTATAATAATTCTATAAATGCGAATGATTCCgcaaacaaaactttaaaaggaCCAATAGCAGTAAGTGCTGCATCGACTGCCACGACGCACTCAACACCACCTCAAGTTGCAATTAGTCCGACTATTGCCACCGCATCAATGGCTGCCGTTGCAGCTTCAACTTTAGGCCGACATACCAATTCGCCGTTTGCAGCTTTGATAGCAGCTGCTGTGGGTGCGCCTTCGCCTTCAAATTCTTCTGTTTTAAGATATGCTGAATCTCCGGTAGCCCATTACCTTGAACGGGATAATGGTGATTTTATTGTACAAGAGACGCCAAAGCATATTGTAGAATGTGTCGAAAAGGATAATGGTGAGTTTTCTGTAATTGAACGAATCTATCAATCTCCACCCAGTGTTTTGCATATACACGATGATGAAGACGACGATGAAGACGCTGATGAGGAAAATAAAGTGGGCGATGATAACAACAATAGTGATGTTGATGATAAGTCCTCCAAGGAAGAGAGAAAAGACGGTCAAATTAAATCGCAAGTCAAAAAGATGAATTCTTCATCACTATTGATAAAGGACGATAACAATCAATGTCGGAATACTAACAAAATGTCAATTGAATCTAAAAACGCTAATAGAAAATCAAAGTGCACAGACACATCTTTGTCTGACAATGATGTTGTGGACTTTGTTAGTATTTCAAGTGATAGCGATGACGAAGAATTTATATCTCACGAACGAAAGGATCATAAAAATACCACcgaaaagacaaaaaagaatgaatcgGCCATATTACCTACTACAACGACATCATCATCAACACATGTGCAACCTTCAATGCCATCAAATGCTGACGCACTGGCAGGTCCAGGAACTTCCCATTCTACTTTGTCTAATAATACGGTTGCACATCAAAGTGTCACTCGCAAGAAATCATCTAAGAACACTATAACAGTACTGAGTGATGTTCAActgaatttaaatgaatatttagATTTAGTTGGAAACATTATTGCTTCAAGTAAAGTTGCTGCTCAGCGCAGAACGTTCTCTTCGATTGCTCCCATTCCGCTGgtaaaaatcgaaaaagaagAACCAATGGATGACTACGCAATTACCGCAACAACTACAATAGAAGAACCACCCACACCTTTGCAGGCCAATAAACAAGAGACTGAAGATTTAACTGATAACCTTAGCAGTAGCAATAAACCTAATCATATAAGCCTAGTAGAACGTGAAGAGCAAAAACCTCAGGTTCTAGAAAATATTCAAGGACATGGAAGTGTAACAACATCGTCATGTAACAAAAATTCCAGCCAGGTTACCAGTGTAATACGAATGGCCACAACTACCACTGCGATTACTAACAAAATGTCTGCTGAAGCTGAAGATCTTTCGCACAATCCGCGAAAGACTCAGTCAACTGGACTGTCTAAAACTTTAGGAAATGCGTCATTAGCTCGAAAAGGTCCGAAAAAACTAGTAATTAAACCAAAATCTTCAAGGAATGATTTATCCTTTGCATTGCCAAATGTTGATGATCAACAACCATCAACATCTGCAAAAGCCTTAGAAGAATACTCTAAACTAATGAGAGCTGACGAAGCCCCCATCGAAAATGAGGTTCAAGTGAAAAATGAGCCAATAACTTCGATTACGTTCGAAAACAATCACTACCAGCAGCAAGCGGGTTACAGTATTTTGGAGCAACATCTAACATCAAAAGAACCTATTATGGAATGCAAAGAGGAAAAGCCATGCATACAAGAATCAAGTGTACCCACAACCATTAAAGAGATGAAAGTGGAGAACAATGTCAACGAGGACGCACGCGTTCTTTATGATTTTGCAACTTCAAAGAAATCCATTACGACAGATAAATTTTCTACTTTTCCATCGCCAACatctttattttctaaaaatacaaaaaccgAGGGAGCTTATGGTTCTCCAAAAATAATTGAGTGCAACAATATGCCATTAGAGATTGATGCGTTGACATTTTCATCACACTCGGCCATGGACACCACGGAATCGCCTCAAGACCgagcaaaaaaatcggtttccaATACATCTATATCTTCTGAGCAGAATGAAAATTCACAAGTGTTTTCTGATTTCCCCTTTAACTAtctttacaacaataacaatgttGCCGAACAAGTAGACATTAAAAATCCCCAGCAGTACGCGTCATTTTACCAAAATTTGGCTACGAACAACAATAACATGAATGCGTCAATGGTTGTAGAAGACTCATCTTCGAGCAAAAACTATTCAGATTATAATCacccacaacaacagcaacaacggaCGTCAACGCATAATCAATGGTTCAATAATTACCAATCTGCTGAAACCAATGCCCCATCATTATCTTCTACTCATTCAAATTCTAATATAAACACATCATTCACCGCCGAATGTAGCACGGCACTCAATGGCAATGAAGTTGGAAAATATTTGGACTTGGATGAATGTAAGCGGGAACAAAATTCAGATGTGAATGTCGGAACAGTTGGCGGGCGATCTATTATTCCTCCACCCCCGCCACCATCATCTTCAACTTCGTGTTCATTTACCGGTGCTACCGAAAACAGCTTGGCCGGTGTTTGTTCAACAGCCGGTACTTTGAATATACGCACAGACGAGAAAATGCCTGCAAAAGGGGAAATTTCTGAGCAGGAAAGTAACTGCGACATTGACAATTCATGGAGCCAACCTATATACGGTGACATATCGGcgcgattttttaaaaccacATTTCCAGGAATATTTCAACAAGAAAATGGGTGGAACCAAGAAGAATATTTTACTGTACAGGACTTGAGTGCATCAACAACTTCTCAAACTGTTAATGCTAACAACCACAGGACAAAAAGCTTCGATTTTCGGCTTTCGTCAGATGGTAACAATGCAGTTGGAGGAGGACATAGCAGCAGCGGAATGTCAATTTTCTCTGCAAATTCAAACGATAACTGTAATATAGATGTGATGCCATCGACGTCGGCAAAGATAAGAAAACGACGCAAACGTAGTTCTCTGGAAGGGAAGTCTGTTGGAACGTCTTTGAAacgtgttcatgcaacatcAACCATAACGTCGCAACAAATGATTCAAAGccaaaatgaaatgcaaaccATTGACTACAATTTTCAACCACAAGAGCAACTACCAAGCACATCATCAGCATTTTTGGCGGGACCATCTAATGCTGGGATGGCAGTGGCTCCATCGTCATCCTCCTCCAATGTGTCACAGCAATCTCAACAGACACAGCAACAACAGAGAACTCGCACAAAAGTATATGAATGTGGTCATTGTAACGCTAAATATTCAAAGCTTAAAGATCGTAATGCTCACATGGTCGACGTCCACAACTATGTGCGCCAGAATAGAAGATTGGTTTGTCTCACAAATGGAATTGCTGTGCCTATGACAGACGCTGTCGCCATGGCCACAACTAGTGCGGTTGACCGTGGCATGTTAATAACACAAGACCCGAACACAGATGGTATCATACATGATTTCAAACCAGGCATAGTTAAAattgaaaacgaaaatattcaccGCGATATTTCCGGCATTGAACCTGTCAACGCTGATTTAAGAGCAAAAACTGAACTAATAGATGACGATAAACAACATGTGTCGTTGGTACCAATTTGCGCATCCTCGCCCAACTCTCAAACTGCATTGGACGCGAAACCACTCAAATTTCAGTCGTTATCCCTTACGACCACGAGTAAATTAACAACACTCTACCGTATGCTGGTTACGTTTAACATGACAACGTTGAAACAAAACCAAAGATTATCGGATTTTGACGAAAATCTTATTAAATCCTCGATCTTCTTTTGCTATATCTGCagacaaaattttaattctgtAAAATTATATGATGCACATTTGACAGAACATCCAGCCGAATGCTTTACTTGTGGCAAAATGTTCCAACGATGGAAGAACTTTTCATTACATTTGAAACGTCATTTGGGATGGAAAGAATTTGGCTGTACTGTTTGCGATAAGAAGTTTGTGGTACGCAGTGCCTTAGTAGAGCACATGCGAATGCATTCAGGTCTATCGCCGCTAAAATGTAAAGTATGCGGTAAACACTTCAAACGGTATTCGAACCTAACACAACATCGTAAGCGGCATTCGAAGCAAGTAATTCGTAGAAAGGAATATGTTTGTTACTGTGGTGAAGTATTACCATCGAAGGCGCGCTTCTTGTGGCATAAGGAAACGCATGACTCAAAACCAAAGTGCTGCCCACACTGTTGCGATCGTTTCGTACATGTTAACTCGCTTAGGCGTCACATTCGCCTCGCTCATTCAGACAAATTTGATTACACCGAGCCTATGGAATGTCCGATGTGTAAGCAAATATTTGCAAAGGCATCCATGAAGGCTCATATGGCTACCCATTCCACTGAAACTCAGTATGATTGTGCTATTTGTAACAAATCATTTTCAACCAAATGGAACCTAAAGATCCATTCGTGGGTACACGCAAATCGTACCGCCAAACCATTTAAGTGTGAACACTGCCCCAAAGCTTTTGTACGAGAAGTTGACTTTAAAAATCACATGAACTCACACAAACAAATTAAGCCATACACGTGCGAAGTATGCGGTTGtaaatttatacgaaaatataaTTACATGCGTCACAGACGAGAACACCATGGTAATAAAAAGTACACCTGTGATCTATGCAAGAAATCGTTCCATCGACACTACTACCTAATAGAGCACAGGCGCATACACACAGGGGAAAGACCTTTTCAATGTACTATTTGCGGTAAAAGTTCTACCACGAAAACCAATCATAATAAACACTTGAAGATACACCATTCACGCGATCCCTTTACTGTGGAAGTATAA
Protein Sequence
MGENMQCPVCTLYLHAGMSLSDHLETHPKEQVIKALVQMTISGVGGGSATLASVLKGDSSAVDVKKSIQEPEDKSLAGDKSNDVNASSASASSSASNCSLSNQSSISSQNSNHVLNFSNAHIDDNSGSEPSSQAQLSLKSNERSVTSNKELASKENTNDSFSSVSRTYSSSTAELANVNNNFAAFANQRYHQQQQRSVGSQPLQLNTPSQMPPPPAPPGQHPEMTRANLPPPSLSQSMSSQSISSGFHSLQSQQLPHPQPPHHSSHISNITNSHGRQSHMFASQHQQPPPPPQHQQDIKVIYSSSLPPPPPLQLFSYQPPSQLHHHQKPPPAYGTAISQIRSQNNQNKNQQQQMQQQQAIHHHNLRIHGAGPPSSQIATKQLFSSKTEDVQHSASSPEASHASRQINNNHQHQNKYFLNQHLQNSDVENHTHYNNSINANDSANKTLKGPIAVSAASTATTHSTPPQVAISPTIATASMAAVAASTLGRHTNSPFAALIAAAVGAPSPSNSSVLRYAESPVAHYLERDNGDFIVQETPKHIVECVEKDNGEFSVIERIYQSPPSVLHIHDDEDDDEDADEENKVGDDNNNSDVDDKSSKEERKDGQIKSQVKKMNSSSLLIKDDNNQCRNTNKMSIESKNANRKSKCTDTSLSDNDVVDFVSISSDSDDEEFISHERKDHKNTTEKTKKNESAILPTTTTSSSTHVQPSMPSNADALAGPGTSHSTLSNNTVAHQSVTRKKSSKNTITVLSDVQLNLNEYLDLVGNIIASSKVAAQRRTFSSIAPIPLVKIEKEEPMDDYAITATTTIEEPPTPLQANKQETEDLTDNLSSSNKPNHISLVEREEQKPQVLENIQGHGSVTTSSCNKNSSQVTSVIRMATTTTAITNKMSAEAEDLSHNPRKTQSTGLSKTLGNASLARKGPKKLVIKPKSSRNDLSFALPNVDDQQPSTSAKALEEYSKLMRADEAPIENEVQVKNEPITSITFENNHYQQQAGYSILEQHLTSKEPIMECKEEKPCIQESSVPTTIKEMKVENNVNEDARVLYDFATSKKSITTDKFSTFPSPTSLFSKNTKTEGAYGSPKIIECNNMPLEIDALTFSSHSAMDTTESPQDRAKKSVSNTSISSEQNENSQVFSDFPFNYLYNNNNVAEQVDIKNPQQYASFYQNLATNNNNMNASMVVEDSSSSKNYSDYNHPQQQQQRTSTHNQWFNNYQSAETNAPSLSSTHSNSNINTSFTAECSTALNGNEVGKYLDLDECKREQNSDVNVGTVGGRSIIPPPPPPSSSTSCSFTGATENSLAGVCSTAGTLNIRTDEKMPAKGEISEQESNCDIDNSWSQPIYGDISARFFKTTFPGIFQQENGWNQEEYFTVQDLSASTTSQTVNANNHRTKSFDFRLSSDGNNAVGGGHSSSGMSIFSANSNDNCNIDVMPSTSAKIRKRRKRSSLEGKSVGTSLKRVHATSTITSQQMIQSQNEMQTIDYNFQPQEQLPSTSSAFLAGPSNAGMAVAPSSSSSNVSQQSQQTQQQQRTRTKVYECGHCNAKYSKLKDRNAHMVDVHNYVRQNRRLVCLTNGIAVPMTDAVAMATTSAVDRGMLITQDPNTDGIIHDFKPGIVKIENENIHRDISGIEPVNADLRAKTELIDDDKQHVSLVPICASSPNSQTALDAKPLKFQSLSLTTTSKLTTLYRMLVTFNMTTLKQNQRLSDFDENLIKSSIFFCYICRQNFNSVKLYDAHLTEHPAECFTCGKMFQRWKNFSLHLKRHLGWKEFGCTVCDKKFVVRSALVEHMRMHSGLSPLKCKVCGKHFKRYSNLTQHRKRHSKQVIRRKEYVCYCGEVLPSKARFLWHKETHDSKPKCCPHCCDRFVHVNSLRRHIRLAHSDKFDYTEPMECPMCKQIFAKASMKAHMATHSTETQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEHCPKAFVREVDFKNHMNSHKQIKPYTCEVCGCKFIRKYNYMRHRREHHGNKKYTCDLCKKSFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00816813;
90% Identity
-
80% Identity
-