Hcyr004283.2
Basic Information
- Insect
- Hydrotaea cyrtoneurina
- Gene Symbol
- -
- Assembly
- GCA_958296145.1
- Location
- OY282512.1:78783664-78790303[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.11 7.2 7.8 0.7 1 23 1555 1578 1555 1578 0.91 2 12 8.3 5.6e+02 1.9 2.4 1 23 1738 1760 1738 1760 0.93 3 12 0.00078 0.052 14.5 2.8 2 23 1763 1784 1763 1784 0.97 4 12 3.8e-05 0.0025 18.7 0.2 3 23 1792 1812 1790 1812 0.98 5 12 7.6e-06 0.00051 20.9 5.8 2 23 1819 1840 1818 1840 0.97 6 12 8.7 5.9e+02 1.8 0.1 5 23 1853 1871 1852 1871 0.96 7 12 0.037 2.5 9.2 0.1 2 23 1910 1930 1909 1930 0.96 8 12 9.1e-05 0.0061 17.5 0.4 1 19 1936 1954 1936 1958 0.95 9 12 5.2e-06 0.00035 21.4 1.8 1 23 1966 1988 1966 1988 0.99 10 12 0.00018 0.012 16.5 6.5 1 23 1994 2016 1994 2017 0.96 11 12 0.0011 0.074 14.1 6.4 1 23 2022 2044 2022 2044 0.99 12 12 0.0028 0.19 12.8 6.0 1 23 2050 2072 2050 2073 0.96
Sequence Information
- Coding Sequence
- ATGGGTGAGAACGTACAGTGTCCGGTATGCACGTTATACCTGCATGCAGGTATGAATCTTTCTGATCACTTGGAAACACACCCGAAAGAGCAAGTGATTAGAGCTCTAGTACAAATGACAATTTCGGGGGTGAGTGGAGGTACAGCAACTTTGGCATCTGTATTAAAGGGCGAAAGCATCGCTGCGGTTGATGAACAAAAAGCAATAAAGGAGCCTGAAGAAAAAACATTGGTTATTGATAAAAGCAATGATTTAAATACTATCAGTGTCGGTAGTAGTTGTAGCGCCAGTGCTAGCAATTCAGCTAGTAACTGCTCACTTTCTAACCAAAGTACAACAAGTAGCCAAAATTCGaacaatatattaaatttttcaaatgcacATATCGATGATACTAGCGGAGCTGAACCCCTGACACAGCCTAAATTGTCATTAAAGTCGGGTGAAACATCGATCGCTAGCAAGGAGGTGGTAGCTAAGGAAAATACGAACGAGTCTTTCACCAATGCACATCGGACATATTCAAGTTCAACAATTGAGTTGTCAAGTGTTAACAACAATTTTGCAGTTTTTTCCAATCAACGgtaccaccaacaacaacagcagcgtaACGCGGGAGGTCACCAGCATCCCTTGAATACCCCATCACAAATGCCCCCGCCGCCGGCTCCCCAAGGGCAGCACCCGGAAATATCACGAGCTAATTTGCAACCGCCTACTCATCCTCAACCAATGTCATCACAGTCTATCTCATCGGGATTTCATTCACTCCAGACTCAACAATTGCCACATCCTCAGTCTCCACATCATAGTTCTCACTTGAGTAATATAGCCAATAGTCATGGTCGCCAGACACATATATTCGCGGGCCAACATCAACAGCCCCCACCACCATCTCACCATCAGCAGGATATTAAAGTTATATATTCCTCAGGTCTACCTCCACCTCCTCCCCTGCAGcTTTTTAGTTACCAGCCGCCAGCCCAGctccaacatcatcatcaaaaACCTCCACCGGCATATGGAACAGCTATTAGTCAAATTCGATCTCAAAACAATCAAAACAAGAATCAAcaacaacaaatgcagCATCAGCAAGCgatacatcatcatcatctacgTATTCATGGTGCAGTACCCCCACCGCCTCCGATAGCcacaaaacaattgttttcttcaaaaacGGATGACGTTCAGCAGCCAACATCGACGCCTGTAGTATCCCAATCCACGAGACAAAGCAGCAAtcaccaacaacatcaaaacaaatatttcctagctcaacaacaacagaattcaGATATAGAAAATCAAGCAcattataataattctataaatggAAATGACAtccacaacaaaacaacaaaaggacCAACAACAGTTAGTGCTACTTCGACTGCAACAGGTAATTCAGCACAGACTCAAGTTGCAATTAGTCCAACGTCAATGGTTGCAGTTGCCGCTTCCACATTGGGTCGACATACTAATTCGCCATTTGCGGCTTTACTAGCTGCTGCCGCTGGTGCGCCTTCGCCTTCGAACTCGTCTGTTTTAAGGTATGCCGAATCCCCAGTAGCCCATTATCTTGAGAGAGACAACGGCGATTTTATTGTACAAGAGACTCCAAAACATATTGTAGAATGTGTCGAAAAGGATAATGGTGAATTTTCTGTAATTGAACGTATATATCAATCTCCACCAAGTGTTTTGCATATACACGAGCATGAAGaagatgacgatgatgctgatgaGGACATTAAAGTGGGCGATGATAGCAACAACAGTGACATCGATGATAAGGTGTCAAAGGAAGATGAAAAAGATAGCCAAAATAAATCGCAAGTTAAAAAAAGATGTTCTACATCGCCGTCTACAAAGGAGGAAAACAATCAATGTCGAAATTCTAGCAAGTTgtcaattgaaacaaaaactagtAGTAAATCGAAGCCCAGAGACAATTCCTTGTCTGATAATGAAATTATGGACTTCGTAAGTATATCAAGTGATAGCGACGACGAAGAGTTTATATCACACGAACGAAAGGATCATAAAAATACCACCGAAAAGTTGAAAAAGAATGAGCCAACTATAATACCTAcaccatcgtcgtcatcatcatcacatgTGCTACCTTCAACGCCGTCAAATGTTGAAGCACAGGTGGGCCCAGCGACATCTCATTCAACGTCGTCTAATAATATGGTTGCACATCAAAGTAGTACTCGCAAAAAATCATCTAAAAACACAATAACCGTACTAAGCGATGTTCAACTAAATCTGAATGAATATTTAGATTTAGTTGGTAATATAATTGCTTCAAGTAAAGTTGCTGCTCAACGTAGAACGTTTACCTCGATTGCTCCCATTCCTCTGGTGAAAATCGAAAAAGAAGAACCGATAGACGACTACGCAGTAACCGCAACCAACACTAAAGAACAACCACCAACACCTTTGAAGGCCAATAAACAAGAGACTGAAGATTTAACTGATAACCCTAGCAGTAGCAATAAACCTAATAATATAAGCCAAGTAGAACGGGATGAGAAAAAACCTCGGGTTCTAGAAAATATGCAAGGAAATGGAAGTATACCCACATCGTCATTTATTAAGAACTCCAGCCAGGTTACCAGTGTAATACGAATGGCCACAACTAGTCAGCATCcccaacaacatcagcaattGATTAACAAATCGAGTGAAAATATGTCTGAATGTAACCTGATACATACTAACAAAATATCAGCCGAAGCAGAAGACCTTTCTCAATATCAGCGAAAAACTCAAACAACTGGACCGTCGAAAACGTCGGCATATTCAGCATTAGCGCGTAAAGGCCCAAAAAAACTGGTTATTAAACCCAAATCTTGTAAATCTTCGTTGTCTGCATTACCAAATATTGATGATCAACAACCGTCAACATCTGCAAAAGCCTTAGAAGCATACTCCAAACATTTGAGAGTTGATGATGCCTTCAATGAGAATGAGGTTCAAGTGAAAAATGAACCAATAACTTCgataacatttgaaaacaatCAGTACCATCAGCAAGCTGGTTACAGTATTCTAGAACAACATCTCACATCAAAAGAGCCAATTATGGAATGTAAAGAGGAAAAACCATGCATACAAGAATCCAGTTTATCCACTGCTATAAGAGAAATGAAAGTGGAGAACAACGTGAATGAGGACGCTCGAGTTCTTTACGATTTTGCAACTTCAAAGAAAGCAAATACTAACAATAAATCTCTTGCATTTCCATCACCAACAtccttattttccaaaaataaaaagccTGAACTAAGCAATAATTCAGTAAAAACAACCGAAAGCAACAATATGCCTTCAGAAATAGATACGTCGCCATATTCTTCACAATCCGCCATGGACAACACAAATCCGTCTcaagaacaaacaaacacatcCAATACGCCCGTTTCTTCCGAGCATAATGGAAGCTCTCAAGTGTTTTCTGATTTTCCCTTTAACTATctctacaacaataacaatgttgCGGACCATGTCGATATTAAAAATCCTCAGCAATTCACTTCTTTTTACCAGGATTCCACTGCGAACAACAATAATATAAACCCATCAATGGTTTTAGAGGACTCATCTTCCAGCAAAAACTACTCAGATTATAATCagccacagcaacaactacCAGGAACGTCGTCGCAAAATCAATGGTTCAACAATTATCAAACTGCCGAAGCCAATGCTCCATCACTATCTTCAAATCATTCTAATTCTAACGTAAACGCATCATTGTCCGCCGAATGTAGTACGGCACTGGATGGCAATGAGGTTGGCAAATATTTGGACTTGGATGAATGTAAGCGCGAACAAAATACAGACATAATTGGCAGTACAGTCAGTGATGGACGATCTACTATTCCCCCACCACCATCATCGTCTACCTCGTGTTCTTTTACCGGTGCAACCGAAAATAGTATGGCCGGCATTTGCTCAACAGCCGGTACTTTGAATATTCGTACAGATGAGAAAATGCCAGCAAAAGGGGAAATTTCTGAACAGGAAAGTAACTGCGACATTGATAATTCATGGAGCCAACCGatatACGGTGACATATCGGCCCGATTctttaaaaacacatttcctGGGATATTTCAACAAGATAATGGCTGGAACCATGAAGAATACTTTACTGTACAAGATTTGAGTGCATCAACGCATTCTCAAGCAGttaatgccaacaacaacagggcAAAAAGTTTTGATTTTCGCCTTCCATCAGACGGTAACAATGCTACGGGAGGCGGGCATAGCAACAGTGGTATGTCAATCTTCTCTGCAAACTCTAATGATAACTGCAATATAGATGTAATGCCATCAACATCGgcaaaaatacgaaaaagacgcaaACGTAACTCACTGGATGGAAAGACAGCTGctgcaacaaatttaaaacgtGTTCAACCAACATCAACCGTAACATCTCAGCAAATGATGCAAAGCCAAGACGAAGTGCAAATCACTGATtacaattttcaacaacaagaGCAACTACCGAGTACATCTTCGGCATTTTTGGCAGGACCATCTAATGCTGAGATAGCCGCCACTCCATCTCCATCCTCCTCAAATGTCTCACAACAATCTCAgcagacacaacaacaacagagaatACGCACAAAAGTATATGAATGCGGGCACTGCAATGCTAAATATTCAAAACTCAAAGATCGTAATGCCCACATGGTCGATGTTCATAATTATGTGCGCCAGAATAGACGATTGGTTTGTCTTACGAATGGGATCGCTGTTCCAATGACAGACGCCATCGCCATGGCTACAACTAGTGCGATTAACGGTGACATGTTAATAACGCAAGATCCAAACACTGATGGCAGCATGAACGATTTCAAACCAGGCATAGTTAAAATAGAAAACGATAATATTCACCGCGATATCTCTGGCATTCAACCTGTTGATGCTGATCTGAGAGCTAAAACTGAAGTAATAGAAGACGACAAACAAAATGTGTCACTGGTACCAATTTGTGCATCCTCGTCCAGCTCTCAAATGGCTATGGACGCTAAACCACCAAATTTCCAACCGCTTTCCCTCACAACAACCACGAGTAAATTAACTACACTCTACCGTATGTTAGTGACATTTAACATGACAActctaaaacaaaaccaaagatTATCGGAATTTGACGAAAATCTTATAAAATCTTCGATCTTCTTTTGCTATATCTGCAGACACAATTTTAATTCAGTAAAATTATATGATGCACATTTGACAGAACATCCTGCCGAGTGCTTTACTTGTGGCAAAAAGTTCCAACGATGGAAAAacttttcattacatttaaagCGGCATCTGGGTTGGAAAGAATTTGGCTGTACTGTTTGCGATAAGAAGTTTGTGGTACGCAGTGCCTTAGTAGAGCACATGCGTATGCATTCCGGTCTATCGCCACTAAAATGTAAAGTATGTGGTAAACACTTCAAACGATATTCAAATCTAACACAACATCGTAAAAGGCATTCGAAACAAATAATTCGAAGAAAGGAATATGTTTGTTACTGTGGTGAAGTATTGCCATCGAAGGCGCGTTTCCTATGGCATAAAGAAACTCACGACTCGAAGCCGAAATGCTGTCCTCACTGTTGTGATCGCTTCGTACATGTTAACTCTCTTAGGCGTCACATACGTCTGGCTCATTCAGACAAATTCGATTACACCGAGCCTATGGAATGTCCGATATGTAAGCAAATATTTGCTAAGGCGTCGATGAAGGCTCACATGGCTACCCATTCCACTGATACTCAATATGATTGTGCTATTTGTAATAAATCATTTTCAACTAAATGGAATCTAAAAATCCATTCGTGGGTACATGCAAATCGTACATCGAAACCATTTAAGTGTGAACACTGCCCCAAGGCTTTTGTGCGGGAAGTTGACTTTAAAAATCACATGAACTcacacaaacaaattaaaccCTACACATGCGAAGTATGTGGTTGTAAATTTATACGCAAATATAATTATATGCGTCACAGACGAGAACACCATGGCAACAAAAAGTATACCTGTGATCTATGCAAGAAATCGTTCCATCGCCACTACTATCTAATAGAGCACAGGCGTATTCACACAGGGGAAAGACCGTTCCAATGTACAATATGTGGTAAAAGTTCCACCACCAAAACCAATCACAATAAACACTTAAAAATACACCACTCACGCGATCCGTTTACTGTGGAAGTATAA
- Protein Sequence
- MGENVQCPVCTLYLHAGMNLSDHLETHPKEQVIRALVQMTISGVSGGTATLASVLKGESIAAVDEQKAIKEPEEKTLVIDKSNDLNTISVGSSCSASASNSASNCSLSNQSTTSSQNSNNILNFSNAHIDDTSGAEPLTQPKLSLKSGETSIASKEVVAKENTNESFTNAHRTYSSSTIELSSVNNNFAVFSNQRYHQQQQQRNAGGHQHPLNTPSQMPPPPAPQGQHPEISRANLQPPTHPQPMSSQSISSGFHSLQTQQLPHPQSPHHSSHLSNIANSHGRQTHIFAGQHQQPPPPSHHQQDIKVIYSSGLPPPPPLQLFSYQPPAQLQHHHQKPPPAYGTAISQIRSQNNQNKNQQQQMQHQQAIHHHHLRIHGAVPPPPPIATKQLFSSKTDDVQQPTSTPVVSQSTRQSSNHQQHQNKYFLAQQQQNSDIENQAHYNNSINGNDIHNKTTKGPTTVSATSTATGNSAQTQVAISPTSMVAVAASTLGRHTNSPFAALLAAAAGAPSPSNSSVLRYAESPVAHYLERDNGDFIVQETPKHIVECVEKDNGEFSVIERIYQSPPSVLHIHEHEEDDDDADEDIKVGDDSNNSDIDDKVSKEDEKDSQNKSQVKKRCSTSPSTKEENNQCRNSSKLSIETKTSSKSKPRDNSLSDNEIMDFVSISSDSDDEEFISHERKDHKNTTEKLKKNEPTIIPTPSSSSSSHVLPSTPSNVEAQVGPATSHSTSSNNMVAHQSSTRKKSSKNTITVLSDVQLNLNEYLDLVGNIIASSKVAAQRRTFTSIAPIPLVKIEKEEPIDDYAVTATNTKEQPPTPLKANKQETEDLTDNPSSSNKPNNISQVERDEKKPRVLENMQGNGSIPTSSFIKNSSQVTSVIRMATTSQHPQQHQQLINKSSENMSECNLIHTNKISAEAEDLSQYQRKTQTTGPSKTSAYSALARKGPKKLVIKPKSCKSSLSALPNIDDQQPSTSAKALEAYSKHLRVDDAFNENEVQVKNEPITSITFENNQYHQQAGYSILEQHLTSKEPIMECKEEKPCIQESSLSTAIREMKVENNVNEDARVLYDFATSKKANTNNKSLAFPSPTSLFSKNKKPELSNNSVKTTESNNMPSEIDTSPYSSQSAMDNTNPSQEQTNTSNTPVSSEHNGSSQVFSDFPFNYLYNNNNVADHVDIKNPQQFTSFYQDSTANNNNINPSMVLEDSSSSKNYSDYNQPQQQLPGTSSQNQWFNNYQTAEANAPSLSSNHSNSNVNASLSAECSTALDGNEVGKYLDLDECKREQNTDIIGSTVSDGRSTIPPPPSSSTSCSFTGATENSMAGICSTAGTLNIRTDEKMPAKGEISEQESNCDIDNSWSQPIYGDISARFFKNTFPGIFQQDNGWNHEEYFTVQDLSASTHSQAVNANNNRAKSFDFRLPSDGNNATGGGHSNSGMSIFSANSNDNCNIDVMPSTSAKIRKRRKRNSLDGKTAAATNLKRVQPTSTVTSQQMMQSQDEVQITDYNFQQQEQLPSTSSAFLAGPSNAEIAATPSPSSSNVSQQSQQTQQQQRIRTKVYECGHCNAKYSKLKDRNAHMVDVHNYVRQNRRLVCLTNGIAVPMTDAIAMATTSAINGDMLITQDPNTDGSMNDFKPGIVKIENDNIHRDISGIQPVDADLRAKTEVIEDDKQNVSLVPICASSSSSQMAMDAKPPNFQPLSLTTTTSKLTTLYRMLVTFNMTTLKQNQRLSEFDENLIKSSIFFCYICRHNFNSVKLYDAHLTEHPAECFTCGKKFQRWKNFSLHLKRHLGWKEFGCTVCDKKFVVRSALVEHMRMHSGLSPLKCKVCGKHFKRYSNLTQHRKRHSKQIIRRKEYVCYCGEVLPSKARFLWHKETHDSKPKCCPHCCDRFVHVNSLRRHIRLAHSDKFDYTEPMECPICKQIFAKASMKAHMATHSTDTQYDCAICNKSFSTKWNLKIHSWVHANRTSKPFKCEHCPKAFVREVDFKNHMNSHKQIKPYTCEVCGCKFIRKYNYMRHRREHHGNKKYTCDLCKKSFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00817797;
- 90% Identity
- -
- 80% Identity
- -