Hdia008028.1
Basic Information
- Insect
- Hydrotaea diabolus
- Gene Symbol
- -
- Assembly
- GCA_963513945.1
- Location
- OY740717.1:21988048-22010672[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.015 1.3 10.5 0.1 3 23 33 53 31 53 0.96 2 16 0.045 3.9 9.0 2.6 1 23 59 82 59 82 0.94 3 16 0.14 12 7.4 0.2 3 23 87 109 85 109 0.88 4 16 0.0046 0.39 12.1 0.2 1 21 117 137 117 138 0.94 5 16 3.6e-06 0.00031 21.9 0.9 1 23 146 168 146 168 0.98 6 16 0.00014 0.012 16.9 3.5 1 23 174 196 174 196 0.98 7 16 0.00021 0.018 16.3 1.5 1 23 202 224 202 224 0.95 8 16 0.21 18 6.9 1.3 1 23 677 700 677 700 0.96 9 16 0.36 31 6.2 0.6 1 10 721 730 721 743 0.78 10 16 0.18 15 7.1 1.2 1 23 751 775 751 775 0.95 11 16 5.8 4.9e+02 2.4 2.3 3 23 781 802 781 802 0.96 12 16 0.001 0.089 14.1 0.2 2 21 814 833 813 834 0.94 13 16 0.00034 0.029 15.7 0.8 1 23 842 864 842 864 0.98 14 16 3.6e-05 0.0031 18.7 2.9 1 23 870 893 870 893 0.97 15 16 3.8e-05 0.0033 18.6 1.1 1 23 899 921 899 921 0.98 16 16 0.00027 0.023 16.0 2.1 1 23 927 949 927 949 0.95
Sequence Information
- Coding Sequence
- ATGGCAGGCGATTCCGATAATGCTACAACCTCTGCGCCCGCCAACCAACCACAGATGCTGGTTAAACTCTCCACGGACGGGGTGCCCAAGTTGTTTTGTCCCATTTGCAATAAGGCTCTGATCTCACTCAACGGCTACGTGAAGCACGTGAAAAAGCACGAACCCCCCGGCGGCTTCCTTTGTCGCTTCTGTGAGGCCCGTTTCTGTTCCGATGATGAATTGAAGAAGCATCGCGAAACCGAACATACCACCATAGCGTGTCGCCTTTGTAAAGACACCACATTCACCAATGAAGACGACTATAGGGTCCACATACGTGATGTCCACGAGGGCGTCGATCGTGAGTTGTACAAATGTGAGAAGTGTGGTGCGGCCTATAAGACACTTGAGCCCTATCGCCGTCATACGGAGACAGAATGTGGCACCATTAAACCGTACAAATGCGACAAATGTCCCATGGCCTTTGTAACCAAGTACAATTTGAAGCAACATTTGGAGAATCATTCGGGAGagttgaaattttgttgcagtTATTGCGGTAGGAACTTTAAGCAGAAGGCCCGACTGGTGGAGCATGAGAGGACGCATACGGGAGAGAAGCCCTACAAGTGCGATgTGTGCGGTAAGAGATTTTCCCATCGAGAGAGCATCGTTACGCATTCTTCCATACACACCGGGGTGCGGCTGGTCGAATGTAAATGTTGCAGTTCACGCTTTTCTTGTCATTCCAATTTAATTAAACATCGACGCAACAGGCCGGAAACCTGTGGCTTACCTGAATATGATCCACCCAAGAATCGTGTAAGGAAACATACCTCCCGCATTCCCGCTGTCCTTAATCCCACCTCGGAAATAAAGGTGGTGAACGTAAATAAAATCATCAAGCCCGATGATTTGGAGAAAGTCAATGCCCAGAAAAAGGAAACGCCGGACAAAGCGAAAACAAAGCCCACGGCTCGTAAACGTACCGGCGGCAGCGTCAATGTAGCATCGCGAAAGAAACCGCCAAAGAAAAAACTTTCCAAAAAGGCCATAATCGAATTTGAGGATAGCGATGATGAGGACATCGATTGGGGCGATGGCAATAAGTATGAAAAGGACGAAGAAGTTGAAGAAATGGCCAGTCCAATGGCCATTAAACAAGAGAGACCACAGAGACAGCGTAAAATTGCACCACCGCCGGCCGATGATGAAATTCTTGTGCCCGGAGCCTTGCCCCAGGAACCGTCCACAACTTGGTCTGACGACAGCGAAGACGATTATGTGCCCGACTACGAACAAGAAGACTCCGATGAAGACGTTGGCGAAGCTAAAGATTTTAAATTCCACATGAGCCAATTGGCAAATATCAAACAAGAGTCCGAAGAGCTGGACGACTCCACCACAAAGATAGACATTGAGCCTCTGGACGATTTCGAATACTCGACCATCGACTCAAACCTGGTGACCGTTAAGTGTGAGGAAGAGGATTCCAATATATTCAATGAAAAGGATAAAATCCTTGAATGTCTGCTGAATGAAAGTGATTACAGCCATATGGGCAATGACAGCACAACGGCAGAagctaaacaaacccaaagCAACAAGAGAAAGAAACGAGCCGCCACAAAGGCGGCTCAGGAACCGATTGATGGGGAATTTAGCTTGGAAGAAACTGAGGTGGTGCTGGTTAAAAATGAGGACAGTGATGATGATTATTATCCGATAACGGATATCTTAGAAGTCAAAGAGGAGATCCCCAACAATCCTCCACGCTGGGATGGTAAGACAGAATGTTTTGTAGTGGTCGAAGACATCACCAATCGATATCCACAATTGAAAACGCAAACGACCATTAAAGTCTCACGAAACTGCCAGCCCTTCTATTCGAAATGTTTCACCATCAAGAATCTAATGAGAAAGCCCAGACCTCGTAAATATCGTCCCAGAGATGGCACGGCCAAGGAGACGCGGCCACAGAGAAAACCGCGCATTAGAGCGGAAGAATTGAGAGAACGCATGCGACTCATGAGGAAACGCGATAAAAGCTACAAGTGCCCCGATTGCATCAAAATCTACCACATGCGTAAACCATACGAGCGTCATCTGAGAGAAGATCACAAATGGCCCGACAAAGATGTCAGGGATTTGTTTAAAGATGAATACGTACCCGATGATGTTTTCAAATGCCATATATGCGATAAAATCTATCTGATGGAAAAGCGTCTAATGGACCACATACCCAAACATGGACCGGATGGTAGTTTGGTACATAAATGCCCTTGCTACTGTGCCAAGTACTATGCTACACGCGAAGAGGCCCAGGCACATGCCCGTGCCGAACACAAAGAGCTACTGTGGTGTGAATTGTGTCAGAAATACATGACAGGCTGTGATGCGCTCAAGTCGCACAGACAGCGTTTGCACAGCACCAAGGAAGTGCAAATTAAGCGAACTTTAGTGTGCGACAAATGTGGCAAGAAATTTATGGGTAGAACCCAATTGACCGATCATGTGCGCTCCGATTGCGGCCGTGTGCCCATATATCAGTGCCAGGTGTGTGGCAAATGTCTAACGACAGCGGGCATTCTTAAGACACACATGCTGTTGCATCAAGAAGATCGCCCCTTTCAGTGTGACAAATGCGGCAAGACTTTTAAGATTAAGGCCCAGTACAAGACGCATCTGAAATATTCTCATTCCGAAGAGAAGCGCTTTAAATGTCATCTTTGCCCCAAAGCCTATCCATATCGCGAGAGTTTGCTGACCCACATGTCTGTACACACGGGTATCAAGCGATTCCTTTGCAATGGTTGTGGCAAACGTTTCACTTGCGTTTCAAATCTTCAAGCTCATCGTAAGGTCCACGCCGAAACCTGCggtcttttgcctttaaatgCCAAGGCTACTCAATATATGGGCGTGCAGAAGGGAAATTTGCTGCTGGGCGCTAAACCAGAGCCCGGCTTAGATTATTTGGAGTCTCAAACTCTTGTCGCCAAAGAAGTCTACACTCAAGATGTTAATGTGATGACGCAGGAAATAAGAGGCATGCAGCCCAGCGGCTCTCTGAGCGGAGGTCTGCCTTTAAACTATACCACAACGGATATAATACTTTTATAA
- Protein Sequence
- MAGDSDNATTSAPANQPQMLVKLSTDGVPKLFCPICNKALISLNGYVKHVKKHEPPGGFLCRFCEARFCSDDELKKHRETEHTTIACRLCKDTTFTNEDDYRVHIRDVHEGVDRELYKCEKCGAAYKTLEPYRRHTETECGTIKPYKCDKCPMAFVTKYNLKQHLENHSGELKFCCSYCGRNFKQKARLVEHERTHTGEKPYKCDVCGKRFSHRESIVTHSSIHTGVRLVECKCCSSRFSCHSNLIKHRRNRPETCGLPEYDPPKNRVRKHTSRIPAVLNPTSEIKVVNVNKIIKPDDLEKVNAQKKETPDKAKTKPTARKRTGGSVNVASRKKPPKKKLSKKAIIEFEDSDDEDIDWGDGNKYEKDEEVEEMASPMAIKQERPQRQRKIAPPPADDEILVPGALPQEPSTTWSDDSEDDYVPDYEQEDSDEDVGEAKDFKFHMSQLANIKQESEELDDSTTKIDIEPLDDFEYSTIDSNLVTVKCEEEDSNIFNEKDKILECLLNESDYSHMGNDSTTAEAKQTQSNKRKKRAATKAAQEPIDGEFSLEETEVVLVKNEDSDDDYYPITDILEVKEEIPNNPPRWDGKTECFVVVEDITNRYPQLKTQTTIKVSRNCQPFYSKCFTIKNLMRKPRPRKYRPRDGTAKETRPQRKPRIRAEELRERMRLMRKRDKSYKCPDCIKIYHMRKPYERHLREDHKWPDKDVRDLFKDEYVPDDVFKCHICDKIYLMEKRLMDHIPKHGPDGSLVHKCPCYCAKYYATREEAQAHARAEHKELLWCELCQKYMTGCDALKSHRQRLHSTKEVQIKRTLVCDKCGKKFMGRTQLTDHVRSDCGRVPIYQCQVCGKCLTTAGILKTHMLLHQEDRPFQCDKCGKTFKIKAQYKTHLKYSHSEEKRFKCHLCPKAYPYRESLLTHMSVHTGIKRFLCNGCGKRFTCVSNLQAHRKVHAETCGLLPLNAKATQYMGVQKGNLLLGAKPEPGLDYLESQTLVAKEVYTQDVNVMTQEIRGMQPSGSLSGGLPLNYTTTDIILL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00816767;
- 90% Identity
- -
- 80% Identity
- -