Basic Information

Insect: Hydrotaea cyrtoneurina
Gene Symbol: -
Assembly: GCA_958296145.1
Location: OY282514.1:75813641-75823560[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.015 1 10.5 0.1 3 23 51 71 49 71 0.96

2 16 0.036 2.4 9.3 2.7 1 23 77 100 77 100 0.94

3 16 0.097 6.5 7.9 0.2 3 23 105 127 103 127 0.88

4 16 0.007 0.47 11.5 0.2 1 20 135 154 135 156 0.94

5 16 3.7e-06 0.00025 21.8 0.9 1 23 164 186 164 186 0.98

6 16 0.00014 0.0096 16.8 3.5 1 23 192 214 192 214 0.98

7 16 0.00021 0.014 16.3 1.5 1 23 220 242 220 242 0.95

8 16 0.056 3.8 8.7 0.5 1 23 698 721 698 721 0.96

9 16 0.37 25 6.1 0.6 1 10 745 754 745 767 0.78

10 16 0.39 26 6.0 1.5 1 23 775 799 775 799 0.93

11 16 0.87 59 4.9 2.1 3 23 805 826 805 826 0.97

12 16 0.0011 0.072 14.1 0.2 2 21 838 857 837 858 0.94

13 16 0.00035 0.023 15.6 0.8 1 23 866 888 866 888 0.98

14 16 4.5e-05 0.003 18.4 2.5 1 23 894 917 894 917 0.97

15 16 3.9e-05 0.0026 18.6 1.1 1 23 923 945 923 945 0.98

16 16 0.00028 0.019 15.9 2.1 1 23 951 973 951 973 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.015	1	10.5	0.1	3	23	51	71	49	71	0.96
2	16	0.036	2.4	9.3	2.7	1	23	77	100	77	100	0.94
3	16	0.097	6.5	7.9	0.2	3	23	105	127	103	127	0.88
4	16	0.007	0.47	11.5	0.2	1	20	135	154	135	156	0.94
5	16	3.7e-06	0.00025	21.8	0.9	1	23	164	186	164	186	0.98
6	16	0.00014	0.0096	16.8	3.5	1	23	192	214	192	214	0.98
7	16	0.00021	0.014	16.3	1.5	1	23	220	242	220	242	0.95
8	16	0.056	3.8	8.7	0.5	1	23	698	721	698	721	0.96
9	16	0.37	25	6.1	0.6	1	10	745	754	745	767	0.78
10	16	0.39	26	6.0	1.5	1	23	775	799	775	799	0.93
11	16	0.87	59	4.9	2.1	3	23	805	826	805	826	0.97
12	16	0.0011	0.072	14.1	0.2	2	21	838	857	837	858	0.94
13	16	0.00035	0.023	15.6	0.8	1	23	866	888	866	888	0.98
14	16	4.5e-05	0.003	18.4	2.5	1	23	894	917	894	917	0.97
15	16	3.9e-05	0.0026	18.6	1.1	1	23	923	945	923	945	0.98
16	16	0.00028	0.019	15.9	2.1	1	23	951	973	951	973	0.95

Sequence Information

Coding Sequence: ATGGATACTTTGGCAGAGTATTACCTATCCCGCCTTAGGATGGAGAATCCCATATTCAACGGATATGATTCCGATAATGCCACAACTTCTGCATCGGGCCAACCGGAGATGCTTGTTAAACTCTCCACGGATGGGGTGCCCAAGTTATTTTGTCCCATCTGCAACAAGGCTCTGATCTCACTCAACGGTTATGTGAAGCATGTGAAGAAGCATGAACCACCCGGTGGCTTCCTGTGTCGCTTTTGTGATGGCCGTTTCTGTTCCGATGACGATTTAAAGAGGCATCGTGAAACCGAACACACCACCATAGCCTGTCGCCTTTGTAAAGACACCACATTTACCAATGAAGACGACTATAGGGCCCATATACGGGATATCCACAAGGGTGTGGATCGTGAGTTGTACAAGTGTGAAAAGTGTGGTGCTGCCTACAAGACCCTCGAGCCCTATCGTCGTCATACGGTGACAGAGTGTGGCACCATTAAGCCGTACAAGTGCGACAAATGTCCAATGGCATTTGTTACCAAGTACAATTTGAAGCAGCATTTGGAGAATCATTCGGGAGAGTTGAAATTCTGTTGCAGCTATTGCGGTAGAAACTTTAAGCAGAAGGCCCGTTTGGTGGAGCACGAGAGGACGCATACGGGAGAGAAGCCTTACAAATGCGACGTGTGCGGTAAACGATTTTCGCATCGCGAGAGCATTGTCACACATTCTTCCATACACACCGGTGTCCGGCTTGTCGAATGCAAATGTTGTAGCTCACGTTTTTCTTGTCATTCCAATTTAATCAAACATCGCCGCAACCGGCCGGACACCTGTGGCTTACCCGAATATGATCCACCCAAGAATCGTATAAGGAAACATACCTCCCGCATCCCTGCTGTCTTGAATCCCACCTCGGAAATAAAAGTGGTGAACGTCAATAAAATCATCAAGCCCGACGATCTGGAAAAAGTCAATGCCCTGAAAAAAGAGACGCCTgacaaagtgaaaacaaaacccACGGCCCGTAAACGTACCGGTGGCAGTGCCCCTGTTGGGCGCCCAAAACAGCCAGCAAAGAAAAAACTCTCCAAAAAGGCCATAATCGAATTTGAGGACAGCGAGGACGATGACATCGATTGGGGAGATGGCAATAAGTATGAAAAagacgaagacgacgacgagGATGATATGACCTTTACGATGACTGTTAACCATGAAAGGCCTAAGAGACAACGTACAATTCAACCACCACCTGCTGATGAAGATGAACTACTTGTTCCCGGTTCCGCACCACAGGAACAGTCCACAAATTGGTCTGATGACAGCGAAGATGATTATGTGCCGGACTTTGAAGCAGAAGATTCGGAGGAAGATATTAGTGAATCGAAAGAATTCAAAGTGGCCATGCCCGAAGTTGCCTATATTAAACAAGAGTCTGACGAGATGATGGATACCACCACCAAAATAGACATTGAGCCGCTCGACGATTTCGAATACTCGAGTATAGACTCAAATATAGTAACCGTCAAGTGTGAGGATGAGGATTCcaatatatttaatgaaaaagatAAAATCCTTGAATGTTTGCTCAATGAAAGTGATTATAGTCGTTTAGATAACGACAGTACATCACCAAAAAATAATCCTTCCCAGCCCCACAAGAAAAGGAAACGAACATCCATGAAAGCAAGACAAGAACCAGATGAAGTAGAGTTTACTTTGGAAGAAACTGAGGTAGTGCTGGTCAAAAATGAGGACAGTGATGCTGAATATTATCCGGTCACGGATATGTTAGAGGTCAAAACAGAGTACCCCGCAAAATCTTCCCGCTTTGATGAGATGAATGATTGCTGTGTGGTGGTGGAAGACATCACCCACCGATATCCCCAATTGAAAACGCAATCGACCGTAAAAGTCTCCCGCAACTGCCAGCCATTCTATTCCAAGTGTTTCGCAATCAAAAATCTCATGAGAAAACCAGCAACTCGTAAATATCGTCCCAGAGCGGAGACCTCGAAAGAATCGGGGACAACGAAAAAACACAGAATTACCGCTGGCGAGTTGAAGGAACGCATGCGGCTCATGAAGAAACGCGATAAAAGCTACAGCTGCCCGGACTGCATTAAGATGTACTACATGCGTAAGCCCTTCGAGCGACATCTGAGGGAGGATCACAAAAAGTCCGAGGCTGAGCTTAAAGAATTATTTAAAGATGAATTGGATGAATTGACCTCGGAGGACGTATTCAAATGTCATATATGCGATAAAATTTATCTCATGGAAAAACGTCTTATGGATCACATACCGAAGCATGGACCCGATGGTAGTCTGATTCACAAATGCCCCTGCTACTGTGCAAAGTACTATCCAACGCGCGAAGCTGCCCAGAGGCATGCCCAAGAGGCCCACAAGGAACTATTGTGGTGTGAAATATGTCAGAAATTTATGACCGGCTGTGATGCCCTCAAATCGCATCGAATGCGTTTGCATGGCAGCAAGGAGTTGAAACTTAAGCGAAATTTGGTCTGTGACAAGTGTGGCAAGAAGTTTATGGGCAGAACCCAATTGACCGATCATGTGCGTTCCGATTGTGGCCGTGTACCCATATACCAGTGTCAGGTGTGTGGTAAATGTCTAACCACGGCGGGTATACTCAAAACACACATGTTGTTGCATCGAGACGATCGTCCCTTCCAATGTGATCAATGCGGCAAGACGTTTAAGATTAAGGCACAGTACAAGACACATCTGAAATATTCGCATTCCGAAGAGAAGCGCTTCAAATGTCATCTTTGCCCGAAAGCGTATCCATATCGCGAAAGTTTATTGACTCACATGTCCGTGCACACGGGCATTAAGCGATTTCTTTGCAATGGCTGCGGCAAACGTTTCACTTGTGTATCGAATCTTCAGGCACATCGTAAAGTCCATGCGGAAACCTGCGGCATGTTGCCGTTGAATGCCAAGGCCACACAATACATGGGCGTGCAGAAGGGCAACTTGCTATTGGGCGCCAAACCCGAGCCCGGACTGGATTATGTGGAATCGCAGACTCTCGTAGCCAAAGAAGTCTACACACAGGATGTTAATGCGATGCTGCAGGATATGCGAGGCACGCAGCCCAGCAATTCTCTAAGCGGTGGTCTACCCTTAAATTATACCACAACGGATATCAAGCTATTATAA
Protein Sequence: MDTLAEYYLSRLRMENPIFNGYDSDNATTSASGQPEMLVKLSTDGVPKLFCPICNKALISLNGYVKHVKKHEPPGGFLCRFCDGRFCSDDDLKRHRETEHTTIACRLCKDTTFTNEDDYRAHIRDIHKGVDRELYKCEKCGAAYKTLEPYRRHTVTECGTIKPYKCDKCPMAFVTKYNLKQHLENHSGELKFCCSYCGRNFKQKARLVEHERTHTGEKPYKCDVCGKRFSHRESIVTHSSIHTGVRLVECKCCSSRFSCHSNLIKHRRNRPDTCGLPEYDPPKNRIRKHTSRIPAVLNPTSEIKVVNVNKIIKPDDLEKVNALKKETPDKVKTKPTARKRTGGSAPVGRPKQPAKKKLSKKAIIEFEDSEDDDIDWGDGNKYEKDEDDDEDDMTFTMTVNHERPKRQRTIQPPPADEDELLVPGSAPQEQSTNWSDDSEDDYVPDFEAEDSEEDISESKEFKVAMPEVAYIKQESDEMMDTTTKIDIEPLDDFEYSSIDSNIVTVKCEDEDSNIFNEKDKILECLLNESDYSRLDNDSTSPKNNPSQPHKKRKRTSMKARQEPDEVEFTLEETEVVLVKNEDSDAEYYPVTDMLEVKTEYPAKSSRFDEMNDCCVVVEDITHRYPQLKTQSTVKVSRNCQPFYSKCFAIKNLMRKPATRKYRPRAETSKESGTTKKHRITAGELKERMRLMKKRDKSYSCPDCIKMYYMRKPFERHLREDHKKSEAELKELFKDELDELTSEDVFKCHICDKIYLMEKRLMDHIPKHGPDGSLIHKCPCYCAKYYPTREAAQRHAQEAHKELLWCEICQKFMTGCDALKSHRMRLHGSKELKLKRNLVCDKCGKKFMGRTQLTDHVRSDCGRVPIYQCQVCGKCLTTAGILKTHMLLHRDDRPFQCDQCGKTFKIKAQYKTHLKYSHSEEKRFKCHLCPKAYPYRESLLTHMSVHTGIKRFLCNGCGKRFTCVSNLQAHRKVHAETCGMLPLNAKATQYMGVQKGNLLLGAKPEPGLDYVESQTLVAKEVYTQDVNAMLQDMRGTQPSNSLSGGLPLNYTTTDIKLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00817709;
90% Identity: -
80% Identity: -