Hdia004634.1
Basic Information
- Insect
- Hydrotaea diabolus
- Gene Symbol
- -
- Assembly
- GCA_963513945.1
- Location
- OY740716.1:141068650-141084623[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.00016 0.014 16.7 0.7 1 23 195 217 195 217 0.95 2 15 0.2 17 6.9 1.8 3 23 225 245 223 245 0.95 3 15 0.00029 0.025 15.9 0.5 1 23 426 448 426 448 0.98 4 15 0.00072 0.062 14.6 0.4 1 23 454 476 454 476 0.99 5 15 1.9e-05 0.0017 19.6 2.8 1 23 508 530 508 530 0.98 6 15 0.014 1.2 10.6 0.3 1 23 553 575 553 575 0.94 7 15 0.022 1.9 10.0 0.4 1 23 581 604 581 604 0.97 8 15 0.45 39 5.8 0.3 5 19 615 629 612 630 0.91 9 15 0.00026 0.023 16.0 5.6 1 23 639 661 639 661 0.97 10 15 0.059 5.1 8.6 1.7 2 23 667 688 666 688 0.97 11 15 1.6e-05 0.0013 19.9 1.0 1 23 697 719 697 719 0.98 12 15 0.0079 0.68 11.4 0.2 3 23 727 747 725 747 0.97 13 15 9.4e-05 0.0081 17.4 0.5 1 23 753 775 753 776 0.95 14 15 0.0043 0.37 12.2 0.0 1 23 786 808 786 808 0.97 15 15 0.008 0.68 11.4 0.0 1 20 1397 1416 1397 1419 0.93
Sequence Information
- Coding Sequence
- atggaTAGTCAATATGGTGGCATTCAATGGATACAGCACAATTCCACCAATCACGGAGATATGAAAACTGCCGGTCAGTTGATAATAGATCCCCATCCTCCCTGTGATGAGGATCTCATGGCCAGTGCGAACTCATCGTCGGACTATATGGCCACCGAGGATGAAGGTGATGCGGTAGCCAATATTGATCAAATCGCGGCGGAGAATTTAATTTTCATGGCTCGCGATGGCCAAATGGTCGCCGAAATTATGACGTCCGATAGAACGGATAAAAATGGTGCTGTGGTTGTGACCACCAGCGATGGCGAGCAAATTGATTGTGATGCTATTATGGAACAAGCCGCCCTAATACAACAGCATGAGGATACCGGCGGCGGCGGAAGGGTTTATGCTGTTGATCAGTATGCGGATACAACGCCCCAAATGGTGACCGAGGAGGTGATCACCGATGACTGGGTGCAACATCAAGGAGAGGAAAGagTCGAAATTCCCGCAGAACAAATCATTTCAAATTCTCAAGTTCTATTGGACATTGAAGTGCCCTTGCCCACAGTGCAAGACGAGTATACGACACTGCGGCCCTATCCGTGTGACTTCTGCAGTCGTCGTTTTCGCAAGAAAGCGAGCCTGATGAATCACATGGTGGCACATCAGAACGATCGACCACATTTGTGCAAGTTGTGTGGGTCGAGGTTTCTTCGACGGCAGGATCTCATCAATCACTTGAAGGCGCACGCAGAAGAGTCATCGGCGGTAGAGCCCCAAATGGATGACAACGATTTTATACACTTTGTTACCGATACCACCTCCTCGTCACAGCGCACTTCCAATGATCATTATTATGAGCAGGATTGGAGTGTGCCCGAAGACTCCGTTACAATACCAATAAAATCTAGTCGTAAACAataccaacagcaacaacaaattacCTCCATGCACTCGAGTGGCAACAACCAATCTTTGATTGATAATAATTCTATGCCATCATCGTCGAATGCACTCGCAACGACGACGACAGCACCACCTAGAGGCCGAATAAGTCGTCTTAAGCCCAAAGAGGATGCCTATGTGGTGGATGTTTCCAATAATTGTACCTCGAATTCATCCAATATGGCTTCGTCGTACAGCATTGTGCATTGTGATACTTTAGGAAACTCTACGGGCGCCATAGAATTTACTCAGGATAACACGCCCACACCGCAGGACAACACCCAGCAAAACAACCAGCAACAAAGACAAATGATACATTATCCCGTGATTGACGACAACAAACCCTTCGTGTGTCAACAGTGTGGACTGGCTTTCTCCCGAGAGAAAGCAATGCTTTCGCATACCAAGACCCATCGCAATGATTCGCCATTCGAGTGTCCACAATGCAATGAGCTTTTCTGGGATCAAACCAGTCTACAAGACCACCAGAGAACACATCAATTCGAAGAAAGCAACTCAGAATATGATCCCAATGAAGGAGAAGAAGAGACGCCAAGTGAATCAGAGTCCGAACAACAATTATATGGAGAATTCTATTGCAGCGAATGTGGCATGTCCTTCCATCGTCAAGACTTGCTGAAGAGGCACGCCAAATCCCATTCGAAGTCAAACAATCCTGGGGCAAATCACAATGGTGCTGAAGACGGCGATAATAACAAAGATCAGCACTGCTGTAATACATGCGGTGAGACGTTTGCTGAAGCTTTGGATTTATTGGCGCATGCAGAAATTCATGCACGATATCCACCCTTTAAATGTGTGTTATGCGGAGAATCTTTCTTTGAGGAACCTACGATTAAGAAACATTTACAATCTCAACATGCAAACGATCTGACAGAAAACTCGTGTATTCTGTGTGGCAAGGAGTGTCGTGATCGTAAAGCTTTAATTAAACATGCCTGGGATCATTCGCGTGAGAAGTGTCATTCATGTTCAAAATGTGGCAAGAACTTTCACAACAAGGCTCGTCTTAAACGTCATATGGCTTCACATCGTGACAAATCAGTGCAGTGCGACGTTTGCCATGAAGAATTCCCCGATGGTCGGACTCTTTCCAATCATCGACATTCTCATAGTACGACCTCGGCGGGGAAATTGTTTCCCTGTCATGAATGTGGTAAAACATTCGGTTCGCGTAGCTCACAGCAAATACATGTGCGCATACATACCGGAGAACGGCCCTATGGATGTCGATTCTGTTGGAAGGCATTTGCCGATGGTGGAACTTTACGGAAACATGAACGTATACACACGGGAGAGAAGCCGTATGCTTGTTCGGTATGTCCCAGAGCTTTCAATCAACGTGTTGTCCTCCGGGAACACATAAGGTCACATCATTCGGGTTTAGATTTCAAGAGAGGTACATACTATTGTACAGTTTGTGGTGAAGATTTGCCGTCGTCGGGAGATTTGATTCAACATTTGATACAGCACAGTGACATGAATACTGCCATGCAGCGGCAACCGGTGACTGGTCCACGGAAATACAAACGCAGGCGCAAACTGAAGCCACATGAAATAGCCCGCTTAAAACGCGAGTCCAAACAGAATGGCGGCAACAGCAGCGATCTCGATATTTCCGATTTCGATATGGACAATGTCGACGATTTGCTTGCAATGACTGAAACTAATACATCTGCAGAAAATACAACCAGCAACCATGAGCTTCCATCATCTGCAAAGGCAACAAAGCAAAAGAACTTATCCGCCGAAAAGGTAGAGACAAACAACAATCGAAATAAATCAGCGTACAACACATTGTCATCGAAGAAAAAGCCTCACATTGTAATAGACCCTGAAGATTTTGACTTGGACGTTGGCATGGACGGTGAAAGCCCCAAAAAGCCCCGATTCAATTCAACTAGTAGTGACAAAATTTGGTCCACAAAATCATCTAACGAAGAAACCTACAAATCCTTATTGTCAAATTTGGAAACCACACTACAAAGTATTGACACTTTGGTAGTGGGCCCATCGTCGAATGCCGTCGAAATGAGTGAAGTTACTTCTACAACAAGCCGGCGCAAAACAAAACACGAATCGACCGCTCAGAGAACACAACAGGTCCAAATTGTGCGATCAGATAAAGAGGGTTCCTCGAGCATTACCACCAGCAGAGGGCGTAAGGGCAAAGCCGACAAAATTGCTGGCACAAACAAGCAGTTCAAGGGACCCCAAATGATACATACCGAAAAGTGCACTGTTTCTTCGGCGGAGGGCGGCAAAAGGAAATCCAAATCTGTTGTCACACGTACACAAACCAACTCCAACATTGACATAACACCAAAATTAGTGGCCATAGTGGACGATTATGACATAATATCGCCAGCGTTGCAGCCTCCAAAACAGATCAGTTGCAGTCCGTTGCATATAAAACAGGAACATGACCACCATCCCCTAATGAAGAGTCAACATCATGTAATGTCATCAAACTCAACAGCCCACAATAGGACACAATCGTCTACAACCCGCCATACCAATGATATCTATGATGCCCACTTGCTGCTTGAAGCTTCGGGATTACGCAACGATCTGGACGAAATTTTAAGATCCCCCTTAAAATCCGATAAACTTGGTGTTTCCCGGCAACGTTTTACCAGTGAATCCTCCACACAATTTCTAGCCGAACAATCCGAAGAGGAACAGCATCTGATAAAAATCGAGCCGACTTCACCGGATCTTAGGGAAATTGTCAATGGTGCAAGTTCAGTCAACACATCGGAAGAAGTGACTTCAGCTGCTATGGAACTTAATGTGACCAACACCTCCACAACACAGTCACGTAGAACCACAAAAGCTACACGATCGCAGAGGAGTTCAAattcaaatagaaaatatttcgaaTTTTCTAATGAACACTTGAATCCGACTAAAACTGCCACCAGTTCAGCAGTATCGAACAAAAGATCCCCGGCAAACAATGCATCCGCAGTTTCCTCATCTTTGAAACCTTCAAAGTCTGCCCGAACCGAGCCGGCAAAAGCTCCAAAAACTACTGTTCATAATAGCACATCCTATTTGGATTATACCATAGTAGACAGCTTCAATGCGGTGTCTAGTTCCTCGCCCAGCCACCACAATGCCAATTCATTTTCTTCAATATCCGCGGTGGTCTCAGCAGCGGATGCTACCGCTGCGGCCgtatcagcagcagcagctcaACAGAATCCATCGCCTGCCCGAAAACCTCAGCGCTATTTTGAGTGTGAAATGTGTTCAGCTGTTTTTTCAGATCGTGCACAACTCCTGGACCATGTGCCCATACACATCTAG
- Protein Sequence
- MDSQYGGIQWIQHNSTNHGDMKTAGQLIIDPHPPCDEDLMASANSSSDYMATEDEGDAVANIDQIAAENLIFMARDGQMVAEIMTSDRTDKNGAVVVTTSDGEQIDCDAIMEQAALIQQHEDTGGGGRVYAVDQYADTTPQMVTEEVITDDWVQHQGEERVEIPAEQIISNSQVLLDIEVPLPTVQDEYTTLRPYPCDFCSRRFRKKASLMNHMVAHQNDRPHLCKLCGSRFLRRQDLINHLKAHAEESSAVEPQMDDNDFIHFVTDTTSSSQRTSNDHYYEQDWSVPEDSVTIPIKSSRKQYQQQQQITSMHSSGNNQSLIDNNSMPSSSNALATTTTAPPRGRISRLKPKEDAYVVDVSNNCTSNSSNMASSYSIVHCDTLGNSTGAIEFTQDNTPTPQDNTQQNNQQQRQMIHYPVIDDNKPFVCQQCGLAFSREKAMLSHTKTHRNDSPFECPQCNELFWDQTSLQDHQRTHQFEESNSEYDPNEGEEETPSESESEQQLYGEFYCSECGMSFHRQDLLKRHAKSHSKSNNPGANHNGAEDGDNNKDQHCCNTCGETFAEALDLLAHAEIHARYPPFKCVLCGESFFEEPTIKKHLQSQHANDLTENSCILCGKECRDRKALIKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRDKSVQCDVCHEEFPDGRTLSNHRHSHSTTSAGKLFPCHECGKTFGSRSSQQIHVRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDFKRGTYYCTVCGEDLPSSGDLIQHLIQHSDMNTAMQRQPVTGPRKYKRRRKLKPHEIARLKRESKQNGGNSSDLDISDFDMDNVDDLLAMTETNTSAENTTSNHELPSSAKATKQKNLSAEKVETNNNRNKSAYNTLSSKKKPHIVIDPEDFDLDVGMDGESPKKPRFNSTSSDKIWSTKSSNEETYKSLLSNLETTLQSIDTLVVGPSSNAVEMSEVTSTTSRRKTKHESTAQRTQQVQIVRSDKEGSSSITTSRGRKGKADKIAGTNKQFKGPQMIHTEKCTVSSAEGGKRKSKSVVTRTQTNSNIDITPKLVAIVDDYDIISPALQPPKQISCSPLHIKQEHDHHPLMKSQHHVMSSNSTAHNRTQSSTTRHTNDIYDAHLLLEASGLRNDLDEILRSPLKSDKLGVSRQRFTSESSTQFLAEQSEEEQHLIKIEPTSPDLREIVNGASSVNTSEEVTSAAMELNVTNTSTTQSRRTTKATRSQRSSNSNRKYFEFSNEHLNPTKTATSSAVSNKRSPANNASAVSSSLKPSKSARTEPAKAPKTTVHNSTSYLDYTIVDSFNAVSSSSPSHHNANSFSSISAVVSAADATAAAVSAAAAQQNPSPARKPQRYFECEMCSAVFSDRAQLLDHVPIHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00816753;
- 90% Identity
- -
- 80% Identity
- -