Hdia022923.2
Basic Information
- Insect
- Hydrotaea diabolus
- Gene Symbol
- bab1
- Assembly
- GCA_963513945.1
- Location
- OY740719.1:164972792-164974609[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2e-17 3.8e-14 53.0 0.0 1 43 55 98 55 100 0.95 2 3 4.7 9.2e+03 -2.7 0.5 3 13 192 202 190 206 0.79 3 3 0.96 1.9e+03 -0.5 0.2 22 30 479 487 471 489 0.88
Sequence Information
- Coding Sequence
- ATGATGGAAAACTCGCATGCCTGGATGGGTGCCTCAGGTTCATCGATAGCAGCAGATAGTTATCAATACCAATTGCAGTCGATGTGGCAGAAATGCTGGAATACCAATCAAAATCTTATGCATCATTTGCGTTTCCGCGAACGCGGCCCGCTGAAATCATGGCGACCCGAAACAATGGCCGAGGCCATTTTTAGCGTTCTCAAGGAGGGTCTGTCCCTCTCGCAGGCCGCTCGCAAATATGACATACCCTATCCGACGTTTGTGCTGTACGCCAATCGTGTTCACAATATGCTGGGACCGTCCATAGACGGTGGGCCCGACCTCCGACCCAAGGGCCGGGGACGTCCGCAGCGTATACTATTGGGCATATGGCCGGATGAGCATATCAAGGGTGTCATCAAAACCGTAGTCTTCCGCGAAGCCAAAGAACTAAAGGATGATAGTTTGACGCATCTGCCATACGGGCGTCATTCGccTATTTTTCCATTTCAGGAGCCCACACTCAGCTATCAAAGTGCAAGTGCACAATGTCCCAACGGCATGCCCACCCCGGCCGGAGACCAGATGTCCCAAGAGGCCACCGCGGCGGCTGTGGCTGCTGTAGCCCACAACATACGGCAGCAAATGCAAATGGCCGCCgtccaacagcagcagcagcaacaacaacatggcGAAGGTCCCTCGGCTCAAGGTCTATTCAATCTGCCGCCACATTTGGCCAGCAGTGGAGCTCTGCCGGTGCCGGCGGGGCCCGGCGGCATGCTGCTGCCCAAGGCTAGTATTTCTCCAGCTCTGAGTGCGACATCGAGTTCGGGTGCATTGGGATCGATGGCAGGACCACGGCATGCTCCCTCTCCTTGTGGGCCAGCAGCATTGCCGGTCATAACACAGCTGCCGCCGGGCATGGCTGTGGCGTTGCATATGGCGGGTTCGCCCGCATCACGCTGTGATCCCAACGCACTTCTAagtcaacagcaacaacatcagctGCAACAATTGCACTTGCAGCAACAACATGCCCTGCAccagcaacatcagcagcagcaacagcaacaacaccagcacAAACTacaccagcagcaacagcaacaacaccagcaacatCAATTATCCTACGGTTCGCACCATCAATCCTTAAGTCATTCTTCCAATCCAGCGGCAGTGGGAACGCCCACGCATGCTCATCTGCAGCAAATGTCCACCGCAACAACGACAGCTTCCTCCACCAAATCGTCATCGTCCACAGTGTCGCCCCTGAGGCGGGCCAGCGTTTCACCACTAACGGAACTAAGCCTAGAGATGTCTTTTAAGCCCGCCCGACCATTTTCACCGTCCCGTCTCTTTGCCGATGATTTGTCCGACATCGTCGGTGTTACATCTGCTGCTGCTACGGCGGCTTCCTCCTCCTGCTCATCCTCCTTGGCGACCATAACAGCGGCCAGCACTTATAGCATACCAGCAGCGTCGACAGCGACCATGGATACGTCAGCATCGGCTACCGCATCGTCGATGTCGGGCGTGACGTCGACGGTCACAACagccgccgccgccaccacgGTGGTGTCTTCCGCCAGCAGCAGTACCATAAGTTCCACGGGCATCAAACTCGAACCCATCACTACAAGTAGCGACTAA
- Protein Sequence
- MMENSHAWMGASGSSIAADSYQYQLQSMWQKCWNTNQNLMHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFREAKELKDDSLTHLPYGRHSPIFPFQEPTLSYQSASAQCPNGMPTPAGDQMSQEATAAAVAAVAHNIRQQMQMAAVQQQQQQQQHGEGPSAQGLFNLPPHLASSGALPVPAGPGGMLLPKASISPALSATSSSGALGSMAGPRHAPSPCGPAALPVITQLPPGMAVALHMAGSPASRCDPNALLSQQQQHQLQQLHLQQQHALHQQHQQQQQQQHQHKLHQQQQQQHQQHQLSYGSHHQSLSHSSNPAAVGTPTHAHLQQMSTATTTASSTKSSSSTVSPLRRASVSPLTELSLEMSFKPARPFSPSRLFADDLSDIVGVTSAAATAASSSCSSSLATITAASTYSIPAASTATMDTSASATASSMSGVTSTVTTAAAATTVVSSASSSTISSTGIKLEPITTSSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00816470;
- 90% Identity
- -
- 80% Identity
- -