Hcyr014730.2
Basic Information
- Insect
- Hydrotaea cyrtoneurina
- Gene Symbol
- bab1
- Assembly
- GCA_958296145.1
- Location
- OY282515.1:6778924-6780749[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.6e-17 3e-14 52.9 0.0 1 43 56 99 56 101 0.95 2 3 3.9 7.3e+03 -2.7 0.5 3 13 193 203 191 207 0.79 3 3 5.8 1.1e+04 -3.2 0.3 22 32 489 499 489 499 0.89
Sequence Information
- Coding Sequence
- ATGATGGAAAACTCGCATGCCTGGATGGGGGGTGCCTCAGGTTCATCGATAGCAGCAGACAGTTATCAGTATCAGTTACAGTCGATGTGGCAGAAATGCTGGAACACCAATCAGAATCTTATGCACCATTTGCGCTTCCGCGAACGGGGCCCACTCAAATCATGGCGACCCGAAACAATGGCCGAAGCTATTTTCAGCGTTCTAAAGGAGGGTCTGTCCCTGTCGCAGGCGGCTCGTAAATACGATATACCCTATCCGACGTTTGTGTTGTACGCCAATCGTGTCCACAATATGCTGGGGCCGTCCATAGATGGTGGGCCCGATCTACGGCCCAAGGGACGGGGGCGCCCGCAGCGTATACTGTTGGGCATATGGCCGGATGAACATATCAAGGGTGTCATTAAAACCGTTGTTTTCCGGGAAGCCAAAGAACTGAAGGATGACAGTCTGACGCATTTGCCATACGGGCGTCATTCGCCTATTTTTCCATTTCAGGAGCCGACGCTCAGCTATCCCAGCGTTAGTTCACAGTGTCCGAACGGCATGCCGACGCCGACGGGAGATCAAATGTCGCAGGAGGCCACGGCGGCCGCAGTGGCGGCGGTGGCTCATAACATACGACAGCAAATGCAAATGGCGGccgtccaacaacaacagcagcagcagcagcaacagcaacatagCGAAGGGGCCACAGGTCAAAGTCTATTCAATCTCCCGCCGCATTTGGCCAGCAGTGGAGCCCTCCCGGTGCCGTCGGGTCCCGGCGGCATGATACTGCCCAAGGCCAGCATTTCGCCCGCACTCAGTGCGACATCCGGCACGGGTGCGGTTGGATCGATGGCGGGTCCACGGCATGCGCCCTCGCCCTGCGGCCCCGCACCGTTGCCGGTCATATCGCAGCTGCCGCCAGGCATGGCCGTCGCTTTGCATATGGCGGGAGCGCCGGCATCGCGATGTGATGCCAATACACTTCTAAGTCAACAGCACCAGCTGCAGCAGTTGCATCTGCAGCAACAACATGCCCTCCaccagcaacatcaacaacagcagcagcagcagcaacaacaacagcacaaacatcatcatcaacaccaccagcagcagcagcatcaacatcAACTATCCTACGGTCCGCACCACCAATCCTTAAGTCATTCTTCCAGTATCACTCCAGTGGGCACGCCCACCCATTCCCACCTGCAGCAAATGTCCACTGCAACAACGACAGCATCTTCCACTAAATCGTCATCGTCCACAGTGTCGCCCCTGCGGCGAGCCAGTCCGCACAGTGTTTCACCGCTAACGGAACTTGGCCTGGAGATGTCATTCAAAGCCGCTCGACCATTTTCACCGTCGCGTCTCTTCGCCGATGATTTATCCGACATCGTTGGCGTTTCCACCGCCATTTCGGCGTCTTCTGCCTGCACCACATCCGCGACCGTGACAACGGCAACAATAACGGCGGCCAGCACTTATAGCCTACCAACAGCGACCGCATCGACCATTGAGGCGTCCACATCATCGGCCACGGGTGTGACGTCGACGGCCACAACAGCCGCAACAGCAACGGTTGTCTCTTCCGCCAGCAGCAGTAACATAAGTTCCACGGGCATCAAACTCGAACCCATCACTACAAGTAGCGACTAA
- Protein Sequence
- MMENSHAWMGGASGSSIAADSYQYQLQSMWQKCWNTNQNLMHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFREAKELKDDSLTHLPYGRHSPIFPFQEPTLSYPSVSSQCPNGMPTPTGDQMSQEATAAAVAAVAHNIRQQMQMAAVQQQQQQQQQQQHSEGATGQSLFNLPPHLASSGALPVPSGPGGMILPKASISPALSATSGTGAVGSMAGPRHAPSPCGPAPLPVISQLPPGMAVALHMAGAPASRCDANTLLSQQHQLQQLHLQQQHALHQQHQQQQQQQQQQQHKHHHQHHQQQQHQHQLSYGPHHQSLSHSSSITPVGTPTHSHLQQMSTATTTASSTKSSSSTVSPLRRASPHSVSPLTELGLEMSFKAARPFSPSRLFADDLSDIVGVSTAISASSACTTSATVTTATITAASTYSLPTATASTIEASTSSATGVTSTATTAATATVVSSASSSNISSTGIKLEPITTSSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00817337;
- 90% Identity
- -
- 80% Identity
- -