Basic Information

Insect: Hydropsyche tenuis
Gene Symbol: -
Assembly: GCA_009617725.1
Location: VTON01000001.1:2345835-2353378[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.03 2.2 8.9 1.3 1 23 76 99 76 99 0.95

2 21 0.023 1.7 9.2 2.6 1 23 106 129 106 129 0.98

3 21 0.35 26 5.5 1.0 2 23 188 210 187 210 0.96

4 21 3 2.2e+02 2.6 3.3 1 23 216 238 216 238 0.96

5 21 0.0011 0.078 13.5 0.5 2 23 244 265 243 265 0.97

6 21 1.7 1.2e+02 3.4 4.4 2 22 595 615 594 615 0.94

7 21 6.8 5e+02 1.5 1.4 1 23 717 739 717 739 0.79

8 21 0.033 2.4 8.8 0.7 2 23 884 905 883 905 0.97

9 21 0.028 2.1 9.0 0.8 2 23 991 1012 990 1012 0.97

10 21 0.16 12 6.6 0.3 1 20 1020 1039 1020 1042 0.95

11 21 0.014 1 10.0 2.1 1 23 1070 1092 1070 1092 0.96

12 21 0.0051 0.37 11.3 4.9 1 23 1099 1121 1099 1121 0.99

13 21 0.31 23 5.7 3.4 1 23 1212 1234 1212 1234 0.97

14 21 0.35 26 5.5 1.0 1 23 1302 1324 1302 1324 0.96

15 21 0.0041 0.3 11.6 2.5 1 23 1330 1352 1330 1352 0.98

16 21 0.15 11 6.7 1.2 3 23 1429 1449 1427 1449 0.94

17 21 0.0066 0.48 11.0 0.2 1 23 1455 1477 1455 1477 0.97

18 21 0.0045 0.33 11.5 2.6 1 23 1564 1586 1564 1586 0.97

19 21 3.9e-05 0.0029 18.0 1.2 1 23 1592 1614 1592 1614 0.99

20 21 0.004 0.29 11.6 1.4 1 23 1693 1715 1693 1715 0.99

21 21 0.00057 0.042 14.3 0.4 1 23 1725 1747 1725 1747 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.03	2.2	8.9	1.3	1	23	76	99	76	99	0.95
2	21	0.023	1.7	9.2	2.6	1	23	106	129	106	129	0.98
3	21	0.35	26	5.5	1.0	2	23	188	210	187	210	0.96
4	21	3	2.2e+02	2.6	3.3	1	23	216	238	216	238	0.96
5	21	0.0011	0.078	13.5	0.5	2	23	244	265	243	265	0.97
6	21	1.7	1.2e+02	3.4	4.4	2	22	595	615	594	615	0.94
7	21	6.8	5e+02	1.5	1.4	1	23	717	739	717	739	0.79
8	21	0.033	2.4	8.8	0.7	2	23	884	905	883	905	0.97
9	21	0.028	2.1	9.0	0.8	2	23	991	1012	990	1012	0.97
10	21	0.16	12	6.6	0.3	1	20	1020	1039	1020	1042	0.95
11	21	0.014	1	10.0	2.1	1	23	1070	1092	1070	1092	0.96
12	21	0.0051	0.37	11.3	4.9	1	23	1099	1121	1099	1121	0.99
13	21	0.31	23	5.7	3.4	1	23	1212	1234	1212	1234	0.97
14	21	0.35	26	5.5	1.0	1	23	1302	1324	1302	1324	0.96
15	21	0.0041	0.3	11.6	2.5	1	23	1330	1352	1330	1352	0.98
16	21	0.15	11	6.7	1.2	3	23	1429	1449	1427	1449	0.94
17	21	0.0066	0.48	11.0	0.2	1	23	1455	1477	1455	1477	0.97
18	21	0.0045	0.33	11.5	2.6	1	23	1564	1586	1564	1586	0.97
19	21	3.9e-05	0.0029	18.0	1.2	1	23	1592	1614	1592	1614	0.99
20	21	0.004	0.29	11.6	1.4	1	23	1693	1715	1693	1715	0.99
21	21	0.00057	0.042	14.3	0.4	1	23	1725	1747	1725	1747	0.98

Sequence Information

Coding Sequence: ATGGCGTCTCCATCCATGGTTCAGAGATCTGGTGATACGCTAATCGTACGCAGTGTGGTTAGCGGTGATCGCCTTTTTTTGGACCCTTCAGAATGTACAAACGGAGAGTCGGTGCCTTCGGCAGCCACTTTTACGGAACCTCCAGATTGTGAATCGCCAATTATAGACGATTATGTGGAAGAATCTGACATAGTAGATTTACCTCagtgcaaaataaaaagaaactaCGATTGTAGTGAGTGTAATTATTTCACGCAAAACCCACGACATTATTTGGCGCATCTGCGAGATGTGCACggtgaaaaagttaaaatttattactgcCCAAACTGTTTGTATGCTTCgagacattttcaaaaactctTGCGACACATGAAGATGGTTCACGGTGCTTACAAAGCCATCGATGCGACGACCGCTTCCAGGAAGAAACCTAAAGAATCATCGTCGCCGATGGACGCCGAAAAACCTGAAAAGCAGGAAGACGACCAAACAACCAAACCCACCGTGGACGCGAAGGCTGAAGAGAAACTAGTCGTTAAAAAATCGAAGATTGAGCTGAAATGCACCACATGCGACTTCATAGCCACTACCTTCACCGTGTTGACAAAACACGAACGCAAAGAGCATCTGAAAACGAAATACTTTCCGTGCTCCAAATGCAACTATGCGACGCACATAAAAGCTCGCTTCACAAAGCACGTCAAATACCATTCCATGCCGATGATCAAATGCGAGGTGTGCGACTTCCGCACCCCATACAAATGGAATTTGGATAGGCACATGAAAAATCACGGAGGCGCAGGCGCCTTCTGCTGTTCCGCGTGCAATTTCACGGCAGACATCAAGCAAAGCCTCACCGTGCACGAGATGAACCATCACGTGCCAGCTGTGGGCACTGGCAATGTGACAACTGGGGGCGGAGGCCCTATTCGACGAAGAAATCGTGTTGGAGCCACTGATACGTCTTCGCCACAAACTACCCGCCCGCGAAGAAGACGTGCCCGTCATCGGCCGATTCAACCAACGTCAATTTTTcagGAGGATGTCAGTACAAACGATCATAACGAGAATACTAACATTAGTATTTCACAAAACAGCACTAACTGTGACGATAGTCTTGTGGATTCTAGTGAAGTTGAAGATACCAAAATTAGTATTCATGCAGTCAATAGTTGCACTGATAGTCAAGACGGAAACGATGACAATagtgttttaaaaatggaATGGACCAATtgtgaaaatcgaaaagatGAAAATGCACTAAAAGTACAAACAAAGAAGACTCCAAGACCGATCCCGAATTTAATACCTTTGCACATGCAGAATTCTGGTCCAATCAGCAAAAATGTGAACTTGAACTCGTTACCattaaatttaagtgttatttcgaaaaattctgATGGTTCAGTCCATGGGAATAAATCTCCAACATACTTGAAAGCTCATTATTCAGAAATAGAAAGAAATGACATTCATTGCAATGATGATAGTGTTGATCTATCTCAGTTTGATCGTTTGTCAGCTAAAAGTGATGAATCATCTCAACATTCGTTGCCAAGAATAGTTAAAACCATtggtaaaaagaaaattgggtcaatatttgataaattatataaagaaaaattgaatgctGCATTTGAGAATggaactttttcaaataaaaatgaagaaaatattgcCAAACATCTACAAAATCActcattcaatgaaaaaaatagtaacacCGAAGacatcaaattaaaccaaataaatattccCTCATCTGGCTTAAGTTCTACAAGATGTCAACATTGTCGTCATAGATGTAAATCGAGCCTAGATTTAGTTGTGCATTTACAAACTTGTTTGTTAACTAACAAAAATCAAGAATCATCACGTACAACTAGTAACGAAGAACAACAGCATGTACCTGTACATCCAATATCCGAAGGAGAAGCATCTGCAGATGATCCACAACTTCCACACCCAAtggaaaatgttgtttttgtatggaaccctattatgaataataatatggcACCAACTACTACCGccgctgaaaattttgatacaactGTAGATAATAGCAAAGTTGCAACTTCAACacccaacaacaacaacattaCTTCAAATGAATATGATAACACAAATAccggaaaaaaagttttcaaatgcCCTCATTGTTCTTTTTGGGCATCCACAGCATCACGTTTTCATGTTCACATAGTAGgacatttaaacaaaaaacccTTCGAATGTTCTCTATGTTCCTATAAATCAAATTGGAGATGGGATATCACCAAGCATATTCGATTAAAATCTGTTCGAGATCCAGAGCATGCCAAGGCCAAAGTTTTGATGACAGATGAAACCGGTAGAAGAAACTATAGCaagtacaataaatatttaactttaatgCAAATTACGGATTCCTCCGTTGATGTAGCGTCTGCatcattaaatttgtttaataggaaaaataaaggaaattgTGGAAACACTACTTCTTTTGATAACGTATCTTCTGTACACTCGGAATCACTTGAAGAGAATGCATCTAATAGTTCTTTCGAACTACGTACACAGAACTCGATGTTTCTCGACGAGCATAAAAATAGTGTCACAGAAGAAAAaactgataataaaaaatcgagaaaatcTATGTGGAAGTGCAAAAAGTGTGATTATagGAATGCGAGCAAAGATGCCTTACTCATGCATGTAagaaaacattcgaaaacaaGCACAACCCAGCCATACCATGAAGAACCGATAGAAGAACCTCCGGCTCCAGAGGTGGCCAATACCTCTGATATATCTAGTATATCATATCGATGTGGTCATTGCAACCAGGTATCCAATTGGAAACATGTTATTCAGcGGCATTGTCGACTCAAACACAATGGAGATGTTAAAGTCGTCGTTTGTTCTAAAAGTGCACCAGtagtaaaaaattcaaacacatcTCAAAACGTTCTTGCGTATATGAAATGCTCTAAATGTCCATTCACCGCAGTGAGCAAATCATTATATGAAAGTCATCTAAAGCAACATACTGTCACAGCGGAATCCACATTCAAATGTTTTATCTGCCCATTTTATGTAAAGACTGAAGCACAACTGATGCAACATTTACCATTACACGGATTGACTGACCCTGAAAAATATAGttctcaaattcaaaattgtaaatCTTCTGTGTCAGAAAATGTACCTATAAAGAGATATAGATGTTCAGATTGTCCTTACGAAAGTAATAGTAAATCACAATTCACCTATCATGAACAGTTTCATAAAGCAAACGATGCTCCATTCAAATGTGATGTCTGTAACTATCAAGTTTCTAAACGTCATTTATTGCACCAGCATATGAAAGTACATGGATTCAATTTATCGCATAAGGATGTTGTAGAATGTGCAAATAATACCACAACAGATATTACACCTCATGTAGAATTGAGTATTTCTTTATTGCCTAATCGGAATAAGAATGATTCAGATTTAGTACAAATGTGGGTATCTTTCTCTggtgaatttcaaaaaatgtataaatgcCGGTCTTGCCCTTATgtgaatttgagaaaaaataacgttCTTGAACATGAAAAGCTGCACAATATGTTTGTAATGGAAGGAGATGAGCAAAATGCACATAAATGTACAGAATGTAATTTTGCCTGTAATAATATAGACACGTACTTATCACATGCTAAAGTACACAAAGAAGATTATGTCAAAGTATTTTGTCCTGTGAATTTTCTCAAAACAGACGAGCAACAGTTAGttgaattaaaagaaataatgagtgaattgaatttgtacaaatataaaccagatgctataaattttaataaaagtgatTGTAAAGATAATGAgacaaatgaaattaattctgaaaataagcAAATGAGTAAATGCATATATTTCTGTTCAGATTGTCCAGCTAGATTTCTCTTTGAGAAGGAACTGCAAAtccattataaatttcattgtatcaGATTACCATATCAATGTTCGATTTGCTCTTATACAGCTCGTCAACACGCTCATTTGTTAGCTCATAAAAACGTCCATTTTGAAGATTATCAAGAAAAGACAAAAGCGCTACAAAAAATGCACAGTACACATCCTGAACATCCTCAGCCAAAAGTAGTTGCAGTACTTACTTTTGTGAATGAATCTGAACCAGTTTGGATTGTTGTTTcagattcaatcaaaaaacccACTTTATCAGATAGTGAAACTATTGATTCTaacttgaatgaaaatatttccggaACAAAGCAATCTAAACAACATTTATGTACTCAATGTCcagcaaaattttttaaaagtgctGCTTTGAATTATCACTTAACCCTTCATGGTGGagaaggaaattttaaatgtcgaCAGTGCAATTATGCAGTTAAAACTATAGGAAATCTTGCTAAACATGAAGCTGTTCATGGTAACATAGACAATCAGATGGATTATGAATCCAGTGaagaaacaaattataaaaatattcctcTATCAGGGACAGATTTGtatcaacataaaacaaaagcAGAAAAGAGAGCTTTATCACAAAAATTGGTGACTAGACCAAACGATCATTTTCCACCAGTTTTACAAGCAGACCCCCAATTTGGTCTATTGATGCATGGAAACCCTGATTTCATCTATccaacatatttaaaaaatggtagaccaaaagaaaaacgatataAATGTCACAAATGTCCTTCAGCATTTGAAAAACGAGAACAATATAAAGTACACTTATCTCTTCACGGATCGAGACAAAGGTACAAGTGTGAAATATGTGATTACTCAGTGAAATATTATGCCAACTATGTGCAACATATGCGTAAGCATCAAATGAACGCAGACGCTCAAGCTGCTCGTCAAGGTGTCTCTAAAAAAAGTGAATCAGAAgagttttcttttcaaaatataagtgATACGAAATTAGCTATAAAAAGTCTTCCAAAACAACCTCACAAAGACTGTTCTAAATTATCCATCAGTGACCAACAAACATTAAAACTTTTGCACAGAAGGCGTTCTAGTGCCGCTAGTATTAAAGATGTAGTCgatgacaaaaaaatttatagatgtACATATTGTCCTTACACAAATCAAAGACGAGACGCATTAGATAATCACATGAGGCGACATTCTTCAGTGTCTAGTGTTTCTAGTAACTTTACGTGTAATTATTGTGATTATGCTGCACCCCAATCTCAATTTTTGAGAGATCATATGAAAGTTCATTTTCATTCACCTAAACACATAACGCCTGAATGTTTTACTAACTTTGAAGGGCttaaaattctcatttctaaaattaacaatatagaTCCTAATAGCTCAAATACAGATTATAAAGAaactatatttaatatgaaaaacgatgttgataataatttaaatgataaaatagaaaataaattgtatgttATTCCAACAACTGGAGAAAGAGTAATTTAA
Protein Sequence: MASPSMVQRSGDTLIVRSVVSGDRLFLDPSECTNGESVPSAATFTEPPDCESPIIDDYVEESDIVDLPQCKIKRNYDCSECNYFTQNPRHYLAHLRDVHGEKVKIYYCPNCLYASRHFQKLLRHMKMVHGAYKAIDATTASRKKPKESSSPMDAEKPEKQEDDQTTKPTVDAKAEEKLVVKKSKIELKCTTCDFIATTFTVLTKHERKEHLKTKYFPCSKCNYATHIKARFTKHVKYHSMPMIKCEVCDFRTPYKWNLDRHMKNHGGAGAFCCSACNFTADIKQSLTVHEMNHHVPAVGTGNVTTGGGGPIRRRNRVGATDTSSPQTTRPRRRRARHRPIQPTSIFQEDVSTNDHNENTNISISQNSTNCDDSLVDSSEVEDTKISIHAVNSCTDSQDGNDDNSVLKMEWTNCENRKDENALKVQTKKTPRPIPNLIPLHMQNSGPISKNVNLNSLPLNLSVISKNSDGSVHGNKSPTYLKAHYSEIERNDIHCNDDSVDLSQFDRLSAKSDESSQHSLPRIVKTIGKKKIGSIFDKLYKEKLNAAFENGTFSNKNEENIAKHLQNHSFNEKNSNTEDIKLNQINIPSSGLSSTRCQHCRHRCKSSLDLVVHLQTCLLTNKNQESSRTTSNEEQQHVPVHPISEGEASADDPQLPHPMENVVFVWNPIMNNNMAPTTTAAENFDTTVDNSKVATSTPNNNNITSNEYDNTNTGKKVFKCPHCSFWASTASRFHVHIVGHLNKKPFECSLCSYKSNWRWDITKHIRLKSVRDPEHAKAKVLMTDETGRRNYSKYNKYLTLMQITDSSVDVASASLNLFNRKNKGNCGNTTSFDNVSSVHSESLEENASNSSFELRTQNSMFLDEHKNSVTEEKTDNKKSRKSMWKCKKCDYRNASKDALLMHVRKHSKTSTTQPYHEEPIEEPPAPEVANTSDISSISYRCGHCNQVSNWKHVIQRHCRLKHNGDVKVVVCSKSAPVVKNSNTSQNVLAYMKCSKCPFTAVSKSLYESHLKQHTVTAESTFKCFICPFYVKTEAQLMQHLPLHGLTDPEKYSSQIQNCKSSVSENVPIKRYRCSDCPYESNSKSQFTYHEQFHKANDAPFKCDVCNYQVSKRHLLHQHMKVHGFNLSHKDVVECANNTTTDITPHVELSISLLPNRNKNDSDLVQMWVSFSGEFQKMYKCRSCPYVNLRKNNVLEHEKLHNMFVMEGDEQNAHKCTECNFACNNIDTYLSHAKVHKEDYVKVFCPVNFLKTDEQQLVELKEIMSELNLYKYKPDAINFNKSDCKDNETNEINSENKQMSKCIYFCSDCPARFLFEKELQIHYKFHCIRLPYQCSICSYTARQHAHLLAHKNVHFEDYQEKTKALQKMHSTHPEHPQPKVVAVLTFVNESEPVWIVVSDSIKKPTLSDSETIDSNLNENISGTKQSKQHLCTQCPAKFFKSAALNYHLTLHGGEGNFKCRQCNYAVKTIGNLAKHEAVHGNIDNQMDYESSEETNYKNIPLSGTDLYQHKTKAEKRALSQKLVTRPNDHFPPVLQADPQFGLLMHGNPDFIYPTYLKNGRPKEKRYKCHKCPSAFEKREQYKVHLSLHGSRQRYKCEICDYSVKYYANYVQHMRKHQMNADAQAARQGVSKKSESEEFSFQNISDTKLAIKSLPKQPHKDCSKLSISDQQTLKLLHRRRSSAASIKDVVDDKKIYRCTYCPYTNQRRDALDNHMRRHSSVSSVSSNFTCNYCDYAAPQSQFLRDHMKVHFHSPKHITPECFTNFEGLKILISKINNIDPNSSNTDYKETIFNMKNDVDNNLNDKIENKLYVIPTTGERVI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00815416;
90% Identity: iTF_00815416;
80% Identity: -