Basic Information

Insect: Hydropsyche betteni
Gene Symbol: -
Assembly: GCA_028571205.2
Location: JAOXNN020000004.1:4247428-4254981[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.028 37 8.9 1.3 1 23 76 99 76 99 0.95

2 21 0.022 29 9.3 2.6 1 23 106 129 106 129 0.98

3 21 0.12 1.6e+02 6.9 1.3 2 23 188 210 187 210 0.96

4 21 2.8 3.7e+03 2.6 3.3 1 23 216 238 216 238 0.96

5 21 0.001 1.3 13.5 0.5 2 23 244 265 243 265 0.97

6 21 1.6 2.1e+03 3.4 4.4 2 22 595 615 594 615 0.94

7 21 6.5 8.6e+03 1.5 1.5 1 23 718 740 718 740 0.79

8 21 0.031 41 8.8 0.7 2 23 858 879 857 879 0.97

9 21 0.027 35 9.0 0.8 2 23 965 986 964 986 0.97

10 21 0.15 2e+02 6.6 0.3 1 20 994 1013 994 1016 0.95

11 21 0.013 17 10.0 2.1 1 23 1044 1066 1044 1066 0.96

12 21 0.0048 6.3 11.3 4.9 1 23 1073 1095 1073 1095 0.99

13 21 0.29 3.8e+02 5.7 3.4 1 23 1186 1208 1186 1208 0.97

14 21 0.33 4.4e+02 5.6 1.0 1 23 1276 1298 1276 1298 0.96

15 21 0.0038 5.1 11.6 2.5 1 23 1304 1326 1304 1326 0.98

16 21 0.14 1.9e+02 6.7 1.2 3 23 1403 1423 1401 1423 0.94

17 21 0.0062 8.2 11.0 0.2 1 23 1429 1451 1429 1451 0.97

18 21 0.0042 5.6 11.5 2.6 1 23 1538 1560 1538 1560 0.97

19 21 3.7e-05 0.049 18.0 1.2 1 23 1566 1588 1566 1588 0.99

20 21 0.0037 5 11.7 1.4 1 23 1667 1689 1667 1689 0.99

21 21 0.00054 0.71 14.3 0.4 1 23 1699 1721 1699 1721 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.028	37	8.9	1.3	1	23	76	99	76	99	0.95
2	21	0.022	29	9.3	2.6	1	23	106	129	106	129	0.98
3	21	0.12	1.6e+02	6.9	1.3	2	23	188	210	187	210	0.96
4	21	2.8	3.7e+03	2.6	3.3	1	23	216	238	216	238	0.96
5	21	0.001	1.3	13.5	0.5	2	23	244	265	243	265	0.97
6	21	1.6	2.1e+03	3.4	4.4	2	22	595	615	594	615	0.94
7	21	6.5	8.6e+03	1.5	1.5	1	23	718	740	718	740	0.79
8	21	0.031	41	8.8	0.7	2	23	858	879	857	879	0.97
9	21	0.027	35	9.0	0.8	2	23	965	986	964	986	0.97
10	21	0.15	2e+02	6.6	0.3	1	20	994	1013	994	1016	0.95
11	21	0.013	17	10.0	2.1	1	23	1044	1066	1044	1066	0.96
12	21	0.0048	6.3	11.3	4.9	1	23	1073	1095	1073	1095	0.99
13	21	0.29	3.8e+02	5.7	3.4	1	23	1186	1208	1186	1208	0.97
14	21	0.33	4.4e+02	5.6	1.0	1	23	1276	1298	1276	1298	0.96
15	21	0.0038	5.1	11.6	2.5	1	23	1304	1326	1304	1326	0.98
16	21	0.14	1.9e+02	6.7	1.2	3	23	1403	1423	1401	1423	0.94
17	21	0.0062	8.2	11.0	0.2	1	23	1429	1451	1429	1451	0.97
18	21	0.0042	5.6	11.5	2.6	1	23	1538	1560	1538	1560	0.97
19	21	3.7e-05	0.049	18.0	1.2	1	23	1566	1588	1566	1588	0.99
20	21	0.0037	5	11.7	1.4	1	23	1667	1689	1667	1689	0.99
21	21	0.00054	0.71	14.3	0.4	1	23	1699	1721	1699	1721	0.98

Sequence Information

Coding Sequence: ATGGCGTCTCCATCCATGGTTCAGAGATCTGGTGATACGCTAATCGTACGCAGTGTGGTTAGTGGCGATCGCCTTTTTTTGGATCCTTCGGAATGTGCGAATGGAGAGTCGGTGCCATCGGCAGCCACTTTTACGGAACCTACAGATTGTGAATCGCCAATTATTGACGATTATGTGGAAGAATCTGACATAGTAGACTTACCTCagtgcaaaataaaaagaaactacGACTGTAGTGAGTGTAATTATTTCACGCAAAATCCAAGACATTATTTAGCACATCTGCGAGATGTGCAcggtgaaaaagttaaaatctaTTACTGTCCAAACTGTTTATACGCTTCgagacattttcaaaaactcttgCGACACATGAAGATGGTCCACGGTGCTTACAAAGCCATCGACGCAGCAACCGCTTCCAAAAAGAAATCCAAGGAATCATCGTCGCCGATGGAGATCGAAAAACCTGAAAAGCAGGAAGACGACCAATCGACCAAACCCACCGTGGAAGCGAAGGCTGAAGAGAAACTAGtcgtaaaaaaatcgaagactGAGCTGAAATGCAACACATGCGACTTCACAGCCACTAGCTTCACCGTGTTGACGAAACACGAACGTAAAGAGCACCTGAAAACGAAGTACTTTCCGTGCTCCAAATGCAACTATGCGACGCACATAAAAGCTCGCTTCACAAAGCACGTCAAATACCATTCCATGCCGATGATCAAATGCGAGGTGTGCGACTTCCGCACCCCATACAAATGGAATTTGGATAGACACATGAAAAACCACGGAGGCGCAGGCGCCTTCTGCTGTTCCGCGTGCAATTTCACGGCGGACATCAAGCAAAGCCTCACCGTGCACGAGATGAACCATCACGTGCCAGCTGTGGGGACTGGAAATGTGACaacggggggcggaggccccaTTCGAAGAAGAAATCGTGTTGGAGCCACTGATACGTCTTCGCCACAAACGACCCGCCCCCGAAGACGACGTGCTCGTCATCGGCCCATTCAACCAACGTCCATCCTTCagGAGGATGTCAGTACAAATGATCATAATGAGAATACTAATATTAGTATTTCACAAAACAGCACTAACTGTGATGATAGTCTTGTGGATTCTAGTGAAGTTGAAGATACCAAAATTAGTCTTCATGCAGTCAATAGTTGCACTGATAGTCAAGACGGAAACGATGACAATAgtgttttaaaaatggaatGGACCAACTGCGAAGTTCGAAAAGATGAAAATGCACTAAAAGTACAAACAAAGAAGACTCCAAGACCAATCCCGAATTTAATACCTTTGCACATGCAGAATTCTGGTCCAATCAACAAAAATGTGAACTTGAACTCGTTACCATTAAATTTaagtgttatttcaaaaaatccagaTAGTTCAGCTCATGGGAATAAATCTCCGACATACTTAAAAGCTCATTATTCAGAAATAGAAAGAAATGACATTCACTGCAATGATGACAGTGTTGATCTATCTCAGTTTGATCGTTTGTCGGCTAAAAGTGATGAATCATCTCAACATTCGTTGCCAAGAATAGTTAAAACCATTGGTAAAAAGAAAACTGGGtcgatatttgataaattatataaagaaaaattgaatgctGCATTTGAGAAtggaactttttcaaataaaaatgaagaaaacattGCCAAACATCTACAAAATCActctttcaatgaaaaaaatagtaacaccgaagacatcaaattaaaccaaataaatatttcctcGTCTGGTTTGAGTTCTACGAGGTGTCAACATTGTCGTCATAGATGCAAATCGAGTCTAGACTTAGTTGTGCATTTACAAACTTGTTTGTTAACTAACAAAAATCAAGAATCATTACGTACAACTGGTAATGAAGAACAACAGCATGTACCTGTACATCCAATATCCGAAGGAGAGGCATCTGCAGATGATCCACAACTTCCACACCCAATGGAAAATGTTGTCTTTGTGTGGAACcctattatgaataataatatgacacCAACTACTACCAccgctgaaaattttgatacaactGTAGAAAATAACAAAGTTGCAACCTCAAcacccaacaacaacaataacattACTTCGCAAGAATATGATAATACAAATAccggaaaaaaagttttcaaatgccCTCATTGTACTTTTTGGGCTTCCACAGCATCACGTTTTCATGTTCACATAGTAggacatttaaacaaaaaaccctTCGAATGTTCTCTATGTTCCTATAAATCAAATTGGAGATGGGATATCACCAAGCATATTCGATTAAAATCTGTTCGAGATCCTGACCATGCCAAGGCCAAAGTTTTGATGACAGATGAAACCGGTAGAAGAAACTATAGcaagaaaaataaaggaaattgtGGGAACACTGCTTCTTTCGATAACGTATCTTCTGTACACTCGGAATCACTCGAAGAGAATGCATCAAATAGTTCTTTTGAACTACGTACACAGAACTCAATGTTTCTCGACGAGCATAAAAATAGTGTCACAGAagaaaaaactgataataaaaaatcgagaaaatctATGTGGAAGTGCAAAAAGTGTGATTATagGAATGCGAGCAAAGATGCCTTACTCATGCATGTaagaaaacattcgaaaacaagCACAATCCAGCCATACCATGAAGAACCAACAGAAGAACCTCCGGCTCCAGAGGTGGCCAATACCTCTGATATATCTAGTATATCATATCGATGTGGTCACTGCAACCAGGTATCCAATTGGAAACATGTTATTCAGcgGCATTGTCGGCTCAAACACAATGGAGATGTTAAAGTCGTCGTTTGTTCTAAAAGTGCACCAgtagtaaaaaattcaaacacatctCAAAACGTTCTTGCGTATATGAAATGCTCTAAATGTCCATTCACCGCAGTCAGCAAATCGTTATATGAAAGTCATTTAAAGCAACATACTGTCACAGCAGAATCCACattcaaatgtttcatttgCCCATTTTATGTAAAGACTGAAGCACAACTGATGCAACATTTACCATTACATGGATTGACTGACCCTGAAAAGTATAgttctcaaattcaaaattgcaaatCTTCAGTATCAGAAAATGTACCTATAAAGAGGTATAGATGTTCAGATTGTCCTTACGAAAGTAATAGTAAATCACAATTCACCTATCATGAACAGTTCCATAAAGCAAATGATGCTCCATTCAAATGCGATGTCTGTAACTATCAAGTTTCTAAACGTCATTTATTGCACCAGCATATGAAAGTACATGGATTCAATTTATCGCATAAAGATGTTGTAGAATGCACAAATAATACTACATCGGATATTACACCTCATGTAGAATTAAGTATTTCTTTACTGCCTAATCGTAACAAGAGTGATTCAGATTTAGTACAAATGTGGGTATCTTTTTCTGGTGAAttccaaaaaatgtataaatgccGGTCTTGCCCTTATgtgaatttgagaaaaaataatgttcttgAACATGAAAAGATGCACAATATGTTTGTAATGGATGGAGATGAGCAAAATGCACATAAATGTACAGAATGTAATTTTGCCTGTAATAATATAGACACGTACTTATCACATGCTAAAGTACACAAAGAAGATTATGTCAAAGTATTTTGTCCTGTGAATTTTCTCAAAACAGACGAGCAACAATTAgttgaattaaaagaaataatgagtgaattgaatttgtataaatataaaccagatgctataaattttaataaaagtgatGGTAAAGATAATGAAACGAATGAaatcaattctgaaaataaacaattgagTAAATGCATATATTTCTGTTCAGATTGTCCGGCTAGATTTCTCTTTGAGAAGGAACTGCAAatccattataaatttcattgtatcaGATTACCATACCAATGTTCTATTTGCTCTTATACAGCTCGTCAACATGCACATTTGTTAGCTCATAAAAACGTCCATTTTGAAGATTATCAAGAAAAGACAAAAGCGCTACAAAAAATGCATAGTACACATCCTGAACATCCTCAGCCAAAAGTAGTTGCAGTACTTACTTTTGTAAATGAATCTGAACCAGTATGGATTGTTGTttcagattcaataaaaaaacccacGTTATCAGATAGTGAAACTATTGATTCCAACTTAAACGAAAATGTTTCTGGAGCAAAGCAAACCAAACAACATTTATGTACTCAATGTCcagcaaaatttttcaaaagtgctGCTTTGAATTATCACTTAACCCTTCATGGCGGAgaaggaaattttaaatgtcgaCAGTGCAATTATGCAGTTAAAACTATAGGAAATCTCGCTAAACACGAAGCTGTTCACGGTAACATAGACAATCAGATAGATTATGAATCTAGTGaagaaacaaattataaaaatattcctcTATCAGGGACAGatttatatcaacataaaacaaaagcaGAAAAGAGAGCTTTATCACAAAAGTTGGTGACGAGACCAAACGATCATTTTCCACCAGTTTTACAAGCAGACCCTCAATTTGGTCTATTGATGCATGGAAATCCTGATTTCATTTATccaacatatttgaaaaatggtagaccaaaagaaaaacgatataaatgtCACAAATGTCCTTCAGCATTTGAAAAACGAGAACAATATAAAGTACACTTATCTCTACATGGATCGAGACAAAGGTACAAGTGTGAAATATGCGATTACTCAGTGAAATATTATGCCAACTATGTGCAACATATGCGTAAGCATCAAATGAATGCAGACGCTCAAGCTGCTCGTCAAGGTGTTTCTAAAAAAAGTGAATCAGAGgagttttcttttcaaaatataagtgATACGAAGTTAGCTATAAAAAGTCTTCCAAAACAACCTCACAAAGACTGTTCTAAATTATCCATCAGTGACCAACAAACATTAAAACTATTGCACAGAAGGCGTTCTAGTGCCGCTAGTATTAAAGATGCAGttgatgacaaaaaaatttatagatgtaCATATTGTCCTTACACAAATCAAAGACGAGACGCATTAGATAATCACATGAGGCGACATTCTTCAGTGTCTAGTGTTTCTAGTAACTTTACATGTAATTATTGTGATTATGCTGCACCTCAATCTCAATTTTTGAGAGATCATATGaaagttcattttcattcaCCTAAACACATAACACCTGAATGTTTTACTAACTTTGAAgggcttaaaattttcatttctaaaattaacgATATAGAACCTAATAGCTCAAATACAGATTATAAAGAaactatatttaatatgaaaaacgatgttgataataatttaaacgataaaatagaaaataaattgtatgttaTTCCAACTACTGGAGAAAgagtaatttaa
Protein Sequence: MASPSMVQRSGDTLIVRSVVSGDRLFLDPSECANGESVPSAATFTEPTDCESPIIDDYVEESDIVDLPQCKIKRNYDCSECNYFTQNPRHYLAHLRDVHGEKVKIYYCPNCLYASRHFQKLLRHMKMVHGAYKAIDAATASKKKSKESSSPMEIEKPEKQEDDQSTKPTVEAKAEEKLVVKKSKTELKCNTCDFTATSFTVLTKHERKEHLKTKYFPCSKCNYATHIKARFTKHVKYHSMPMIKCEVCDFRTPYKWNLDRHMKNHGGAGAFCCSACNFTADIKQSLTVHEMNHHVPAVGTGNVTTGGGGPIRRRNRVGATDTSSPQTTRPRRRRARHRPIQPTSILQEDVSTNDHNENTNISISQNSTNCDDSLVDSSEVEDTKISLHAVNSCTDSQDGNDDNSVLKMEWTNCEVRKDENALKVQTKKTPRPIPNLIPLHMQNSGPINKNVNLNSLPLNLSVISKNPDSSAHGNKSPTYLKAHYSEIERNDIHCNDDSVDLSQFDRLSAKSDESSQHSLPRIVKTIGKKKTGSIFDKLYKEKLNAAFENGTFSNKNEENIAKHLQNHSFNEKNSNTEDIKLNQINISSSGLSSTRCQHCRHRCKSSLDLVVHLQTCLLTNKNQESLRTTGNEEQQHVPVHPISEGEASADDPQLPHPMENVVFVWNPIMNNNMTPTTTTAENFDTTVENNKVATSTPNNNNNITSQEYDNTNTGKKVFKCPHCTFWASTASRFHVHIVGHLNKKPFECSLCSYKSNWRWDITKHIRLKSVRDPDHAKAKVLMTDETGRRNYSKKNKGNCGNTASFDNVSSVHSESLEENASNSSFELRTQNSMFLDEHKNSVTEEKTDNKKSRKSMWKCKKCDYRNASKDALLMHVRKHSKTSTIQPYHEEPTEEPPAPEVANTSDISSISYRCGHCNQVSNWKHVIQRHCRLKHNGDVKVVVCSKSAPVVKNSNTSQNVLAYMKCSKCPFTAVSKSLYESHLKQHTVTAESTFKCFICPFYVKTEAQLMQHLPLHGLTDPEKYSSQIQNCKSSVSENVPIKRYRCSDCPYESNSKSQFTYHEQFHKANDAPFKCDVCNYQVSKRHLLHQHMKVHGFNLSHKDVVECTNNTTSDITPHVELSISLLPNRNKSDSDLVQMWVSFSGEFQKMYKCRSCPYVNLRKNNVLEHEKMHNMFVMDGDEQNAHKCTECNFACNNIDTYLSHAKVHKEDYVKVFCPVNFLKTDEQQLVELKEIMSELNLYKYKPDAINFNKSDGKDNETNEINSENKQLSKCIYFCSDCPARFLFEKELQIHYKFHCIRLPYQCSICSYTARQHAHLLAHKNVHFEDYQEKTKALQKMHSTHPEHPQPKVVAVLTFVNESEPVWIVVSDSIKKPTLSDSETIDSNLNENVSGAKQTKQHLCTQCPAKFFKSAALNYHLTLHGGEGNFKCRQCNYAVKTIGNLAKHEAVHGNIDNQIDYESSEETNYKNIPLSGTDLYQHKTKAEKRALSQKLVTRPNDHFPPVLQADPQFGLLMHGNPDFIYPTYLKNGRPKEKRYKCHKCPSAFEKREQYKVHLSLHGSRQRYKCEICDYSVKYYANYVQHMRKHQMNADAQAARQGVSKKSESEEFSFQNISDTKLAIKSLPKQPHKDCSKLSISDQQTLKLLHRRRSSAASIKDAVDDKKIYRCTYCPYTNQRRDALDNHMRRHSSVSSVSSNFTCNYCDYAAPQSQFLRDHMKVHFHSPKHITPECFTNFEGLKIFISKINDIEPNSSNTDYKETIFNMKNDVDNNLNDKIENKLYVIPTTGERVI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00816131;
90% Identity: iTF_00816131;
80% Identity: -