Basic Information

Insect: Hydropsyche tenuis
Gene Symbol: -
Assembly: GCA_009617725.1
Location: VTON01000065.1:280291-285929[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.021 1.5 9.4 0.2 2 23 409 431 408 431 0.93

2 16 0.11 7.7 7.2 3.1 1 20 606 625 606 626 0.94

3 16 9.3 6.8e+02 1.1 1.0 2 23 639 660 638 660 0.88

4 16 2.8 2.1e+02 2.7 1.4 3 23 670 692 670 692 0.89

5 16 0.00012 0.0088 16.4 1.3 1 23 696 720 696 720 0.96

6 16 0.0039 0.29 11.7 1.3 1 23 725 747 725 747 0.95

7 16 0.015 1.1 9.9 2.3 1 23 753 775 753 775 0.98

8 16 0.99 72 4.1 0.0 2 20 786 804 785 806 0.87

9 16 0.0016 0.12 12.9 5.3 1 23 898 920 898 920 0.98

10 16 1.7 1.3e+02 3.4 3.1 3 23 994 1015 993 1015 0.95

11 16 0.003 0.22 12.0 0.1 1 23 1034 1057 1034 1057 0.96

12 16 2.6e-05 0.0019 18.5 0.1 2 23 1074 1095 1073 1095 0.96

13 16 0.00013 0.0096 16.3 0.2 1 23 1117 1140 1117 1140 0.95

14 16 0.45 33 5.2 2.9 1 23 1146 1168 1146 1168 0.96

15 16 7.9e-05 0.0058 17.0 0.3 1 23 1174 1196 1174 1196 0.98

16 16 0.0088 0.64 10.6 1.9 1 23 1202 1224 1202 1224 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.021	1.5	9.4	0.2	2	23	409	431	408	431	0.93
2	16	0.11	7.7	7.2	3.1	1	20	606	625	606	626	0.94
3	16	9.3	6.8e+02	1.1	1.0	2	23	639	660	638	660	0.88
4	16	2.8	2.1e+02	2.7	1.4	3	23	670	692	670	692	0.89
5	16	0.00012	0.0088	16.4	1.3	1	23	696	720	696	720	0.96
6	16	0.0039	0.29	11.7	1.3	1	23	725	747	725	747	0.95
7	16	0.015	1.1	9.9	2.3	1	23	753	775	753	775	0.98
8	16	0.99	72	4.1	0.0	2	20	786	804	785	806	0.87
9	16	0.0016	0.12	12.9	5.3	1	23	898	920	898	920	0.98
10	16	1.7	1.3e+02	3.4	3.1	3	23	994	1015	993	1015	0.95
11	16	0.003	0.22	12.0	0.1	1	23	1034	1057	1034	1057	0.96
12	16	2.6e-05	0.0019	18.5	0.1	2	23	1074	1095	1073	1095	0.96
13	16	0.00013	0.0096	16.3	0.2	1	23	1117	1140	1117	1140	0.95
14	16	0.45	33	5.2	2.9	1	23	1146	1168	1146	1168	0.96
15	16	7.9e-05	0.0058	17.0	0.3	1	23	1174	1196	1174	1196	0.98
16	16	0.0088	0.64	10.6	1.9	1	23	1202	1224	1202	1224	0.97

Sequence Information

Coding Sequence: ATGtcgttcataataaatttgatgaagGATGGCGAGGAAGTTCCGCTCGAAATTTATCCCGAAGACGATTTTAATTCGATTGTCGAAAGAGCGaaccTTTTGGTCGGATATAAAATAGACATAAGCAGTTTCACCGGAGAAGACGTAGTGGATCCGTCGGACAATGTCTacgattattttatgaataacgAACCCTCCTTGAAAGATCACTTTGAATATGGCTCCAACAATGCTCTCGAGTATTTGGAAGAGGACGCCGAAGCGCTCAAGAAACTGGGCAACAACAGTACCATCATTATTGCCGGAGACGATTCGGACGAAAGAAacgtcataaaaattatagaactTTCAGATAACGAAGACAACGACGGTCAAGTTCGCATCAAAATGGAACCTCCGTTTATCAAATCTGAATTGTTAGAACTTCTCCCTATGTTAGAAAACGTATCCAATATGAATGATTCTGCAGACGGTGCAGATCAGCTAGAAGGGTTCCTTTTGAGAGAAAAAATCAACGTAAATAGGATTATCGAAACAATTGTCAAAAATCGAGTTACATgtcatttttgtaatatacgAGTGTCTAACATGAAAGATCCTAGAaggaattatatttttgatgaaaaaaatcaatcgatctTCAATCAGAATGTTCTGATGAATATTGTAATGAGCGCTAAACTGATATGCGGTAAATGTCTCAAtaataactttcaaaaattatcaaagtgcagtaaaaagttgaatacgGACGAGAGTATCGTCGTCAGTGATAAAATGAAAGTTATCTACAGAAGTTTGCCAGACGAAGAAACTTTCAAGAGCCGTAGAAAATCTAGAATTATTGTGAAACAAGATGTCGATTCTTTGTTAGACGATGAAGATTATGTTGTGACGaaggaaaaaaagaaaagaggGCGTAAAAAAGCCGCCCACGCTTCCACTCCTTCTAATTTTGTAGTTAGGAGAAAAATTACGTCGAATGTCACCGATGCTGAACTTCAGAAGAAAACGTCCGTTATCAAGAGGAAATTGGAAATGGATGGTACAATTTCTGAATTTTGTGTCTCAAATGAAGAAGATATGCATTCTCAAAGTAAGAAGATGAAAATGCCCGGGGAAAGTGAACTGATTTGTCGTTCTTGTGGACTTCAATTCGAAGATCTCACAGCAGTTGTCGAACACGGTCCTGCTCATCATGTTAATAACCGAATTAACGGAATACCATGTGGTCTCTGTTTACGAAgtttCAAAAGTATTAGTGTTTTAAAAAGACATGTATATTCCGATCACATACAATCGCAACCAATCAAAGCTGAAAAAAGAGACGAAATCAAGTTAGAAAATAccaaatatcataaaaaagagGAGTATCATGACGAACATGAAGCTGAAGATGATTTAACAGATAGATTGCACAAATATTTATCTGGAGAAATAGATGCTGATACGTTTTTCCAACAAGAACACTCAAAAACTGTTCAAGATAGTCAAGTAGTGCTAGATGAAGATGATGACGATCTTGAAGTTTGGATAGTTCAAGCCGAAAAACCTGGAGAAGAGAatgacaaagaaaaaatagtaGATATATCTTCTCTAGACGATGACGAGCAAGATGATGGAGACGAGTTAGCGTTTCTCAATGCTATTGACAATTCCACTAATAATGCAGAAAATGCCAACCAAATTAATGAAGCCTTTGAAGATGTGGATTATTATGAAGATCCCGAGTATGAACCTGAAGAAAACGACGATAATGACAGTTGCAAATCTGTGGAAATATCTAGACCTAGAAGAAGAATAGGCcaaggaaaatataaatgtgataCATGCAAaAAAGGATATACTTCCCAATTGCGTCTCGAGCAACATAAGTGTTGTCCtggaaatatttctgataaaaaagACGATTTAACATGTTTCATATGCAATGAGATATTCTTATCTAAAGTTCGATTACAATTTCATAAACAAACTCACCGAGAAGGCGGTTGGCAAGAAATGGGATGTGATCAGTGTGGTCGTAGAGACTTTAATTCTGAACATGAACTATTCGATCACATTTACTTCAGTCACTCAAAGCCATTTATATGTCCTTACGAAGGATGCACAAAAACGTTCAAACTCAAaaaattgcTGAAGACCCATATGAAGGATCATGGCATAAAGAAATATGCATGTAATATTTGCAACCAACGCTTCCAAGTTCATCAAACTCTTAAAGAACATATGGTGCTGCATATGAGggtGAAACCTTTCCAATGTCACATTTGCCAAAAATATATGAGCAAAGCTTCTCGATTACGCATGCATTTACTCGTTCACACTTCTCAACAAAATCCCGCTCATGTGCTCGTTTGTAAGATATGTGATGGTGCCTTTAAAGACGTTGAGGAAGCTGAGTCGCACACTGAGAAACCTGAGATGTGCGAACCTAAGGTCGAAGATACTGATGGTATTTACGATGAAGAGATGTATGAAGATATGGGTATTGAAATCTTATCGCCTAACACTTTTTATAATGATCAAGATATCAAACCCGCTTGGAGAAAGGAAGACTCGctgaaaaaagAAGGTACTGACGGTACGGAGGCTGGAAGTGGACCAACTTTATCGAATAAACATAGTCTATTGATGCAATTGTCTGATTCTGCGAGAAAGACTATCACTGCTGTGTGGATCGATAAAGTTTACAGTTGTCAATATTGTGAAAaagtATATTACACGAAAGAAGCCCTTCATCAACATAGACATATGCACAGCAACAGTCGCGAACCCTATCAATGTCACTTATGTACAGCACATAAATCAACCCATGGGTATTTCAAAGAAGGTGGCGCCCCATCTTTGCGAGATTTTCCCGTTATCAAACATTATTTATGTGATtTATGCGACAAAAGTAATTTACTATGGACTACCGTTAGTGTCCATTATAGGCATCATCATAGGTATAATGTGAATCGACGCGATCCTCCGCCGTGTAAAAATTGCTGTCAACAGTTTTACAATAGTTGGGATCTCGGTAAACATCGAAGGTTGAAGCATAGAAGAGAAGTTCATGCAGCTGCAAAGGCTCCCATCAAAGTTGTCAACTATTCGTATAAGTGTTTGGAGTGTGATCAACAATTGCCCAATAAAGCAGCTTTGACTTCGCATAGAAAAGCTGCCCATGGAGATGGAGAAGGTGGAAAAAAACCTAATAAAAACGctGGCGTACTCGTTTGTTCTGAATGCGGAAAAACATATGCAACTAAACCAGCTTTACTCACACATATCAAATGGCACACTGAACATGGTGTTGGAATCGAAGCTGCCCGACGAAGAAAGAGGGCTTTCGGTAAAGGAAGTCATATATGTTCAACTTGCGGTCTCGGGTTCTATTCAGCTGCAAACCTCAGAGCTCATATAGatcgtatccatgaaaaatgttacaaaTATACGTGCGAAGAGTGTGGTAAAGGGCATTTTACTCATGTGGAGATGGAAACTCATAAACTCACACATACTGGTGAGCGTCCATTCAAATGTCCAGATTGTCCCAGAGCCTATGTTACCAAAGCCATACTAAACAAACATTACCgAAATCATACTGGTGAGCGACCGTATTCTTGTGACCTTTGTGGAGCTGCTTTCAAAACAGCTCATTCGAGAAACTATCACAAACTCAAACACGAAAACGGAAAGTTACCTGCACCGCTCATCATTTTAGAAGTCAAAGGTGGCGATGCAAAAGGTTTAGAAGCCGCTTTACAGGAAATGCAGGGTATGGGCGAAAGTAAAAAAGAatctaaaatcataaaacactACATCGAAGATGGAGGAAATATAAAAGAAGAAATAGAAGAAGAGTTCCAGCAAGAAGTCAACGAAGAAGAAGTTCTCATAAGAACGTCAGAAGTTGACGAATCTGATGAAAATGTCATTACGGAGGAAACACCAGACGGTGTACATATATTCTATAGAGGCATTGTTCGAGGTATGGACGAACAAGGCTGTGAAAACGAGTACACGATAGAATATGAAGAGGCTCAGTag
Protein Sequence: MSFIINLMKDGEEVPLEIYPEDDFNSIVERANLLVGYKIDISSFTGEDVVDPSDNVYDYFMNNEPSLKDHFEYGSNNALEYLEEDAEALKKLGNNSTIIIAGDDSDERNVIKIIELSDNEDNDGQVRIKMEPPFIKSELLELLPMLENVSNMNDSADGADQLEGFLLREKINVNRIIETIVKNRVTCHFCNIRVSNMKDPRRNYIFDEKNQSIFNQNVLMNIVMSAKLICGKCLNNNFQKLSKCSKKLNTDESIVVSDKMKVIYRSLPDEETFKSRRKSRIIVKQDVDSLLDDEDYVVTKEKKKRGRKKAAHASTPSNFVVRRKITSNVTDAELQKKTSVIKRKLEMDGTISEFCVSNEEDMHSQSKKMKMPGESELICRSCGLQFEDLTAVVEHGPAHHVNNRINGIPCGLCLRSFKSISVLKRHVYSDHIQSQPIKAEKRDEIKLENTKYHKKEEYHDEHEAEDDLTDRLHKYLSGEIDADTFFQQEHSKTVQDSQVVLDEDDDDLEVWIVQAEKPGEENDKEKIVDISSLDDDEQDDGDELAFLNAIDNSTNNAENANQINEAFEDVDYYEDPEYEPEENDDNDSCKSVEISRPRRRIGQGKYKCDTCKKGYTSQLRLEQHKCCPGNISDKKDDLTCFICNEIFLSKVRLQFHKQTHREGGWQEMGCDQCGRRDFNSEHELFDHIYFSHSKPFICPYEGCTKTFKLKKLLKTHMKDHGIKKYACNICNQRFQVHQTLKEHMVLHMRVKPFQCHICQKYMSKASRLRMHLLVHTSQQNPAHVLVCKICDGAFKDVEEAESHTEKPEMCEPKVEDTDGIYDEEMYEDMGIEILSPNTFYNDQDIKPAWRKEDSLKKEGTDGTEAGSGPTLSNKHSLLMQLSDSARKTITAVWIDKVYSCQYCEKVYYTKEALHQHRHMHSNSREPYQCHLCTAHKSTHGYFKEGGAPSLRDFPVIKHYLCDLCDKSNLLWTTVSVHYRHHHRYNVNRRDPPPCKNCCQQFYNSWDLGKHRRLKHRREVHAAAKAPIKVVNYSYKCLECDQQLPNKAALTSHRKAAHGDGEGGKKPNKNAGVLVCSECGKTYATKPALLTHIKWHTEHGVGIEAARRRKRAFGKGSHICSTCGLGFYSAANLRAHIDRIHEKCYKYTCEECGKGHFTHVEMETHKLTHTGERPFKCPDCPRAYVTKAILNKHYRNHTGERPYSCDLCGAAFKTAHSRNYHKLKHENGKLPAPLIILEVKGGDAKGLEAALQEMQGMGESKKESKIIKHYIEDGGNIKEEIEEEFQQEVNEEEVLIRTSEVDESDENVITEETPDGVHIFYRGIVRGMDEQGCENEYTIEYEEAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00815385;
90% Identity: iTF_00815385;
80% Identity: -