Basic Information

Insect: Hydropsyche betteni
Gene Symbol: -
Assembly: GCA_028571205.2
Location: JAOXNN020000074.1:4042245-4048294[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.18 2.4e+02 6.4 0.2 2 23 409 431 408 431 0.92

2 16 0.023 31 9.2 2.3 1 20 607 626 607 627 0.94

3 16 3.4 4.5e+03 2.4 1.6 2 23 640 661 639 661 0.89

4 16 2.7 3.6e+03 2.7 1.4 3 23 671 693 671 693 0.89

5 16 0.00012 0.15 16.4 1.3 1 23 697 721 697 721 0.96

6 16 0.0018 2.4 12.7 1.4 1 23 726 748 726 748 0.96

7 16 0.014 19 9.9 2.3 1 23 754 776 754 776 0.98

8 16 0.95 1.3e+03 4.1 0.0 2 20 787 805 786 807 0.87

9 16 0.0014 1.8 13.0 4.8 1 23 899 921 899 921 0.98

10 16 1.6 2.2e+03 3.4 3.1 3 23 1005 1026 1004 1026 0.95

11 16 0.0029 3.8 12.0 0.1 1 23 1045 1068 1045 1068 0.96

12 16 2.5e-05 0.033 18.5 0.1 2 23 1084 1105 1083 1105 0.96

13 16 0.00013 0.17 16.3 0.2 1 23 1127 1150 1127 1150 0.95

14 16 0.44 5.8e+02 5.2 2.9 1 23 1156 1178 1156 1178 0.96

15 16 7.6e-05 0.1 17.0 0.3 1 23 1184 1206 1184 1206 0.98

16 16 0.0084 11 10.6 1.9 1 23 1212 1234 1212 1234 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.18	2.4e+02	6.4	0.2	2	23	409	431	408	431	0.92
2	16	0.023	31	9.2	2.3	1	20	607	626	607	627	0.94
3	16	3.4	4.5e+03	2.4	1.6	2	23	640	661	639	661	0.89
4	16	2.7	3.6e+03	2.7	1.4	3	23	671	693	671	693	0.89
5	16	0.00012	0.15	16.4	1.3	1	23	697	721	697	721	0.96
6	16	0.0018	2.4	12.7	1.4	1	23	726	748	726	748	0.96
7	16	0.014	19	9.9	2.3	1	23	754	776	754	776	0.98
8	16	0.95	1.3e+03	4.1	0.0	2	20	787	805	786	807	0.87
9	16	0.0014	1.8	13.0	4.8	1	23	899	921	899	921	0.98
10	16	1.6	2.2e+03	3.4	3.1	3	23	1005	1026	1004	1026	0.95
11	16	0.0029	3.8	12.0	0.1	1	23	1045	1068	1045	1068	0.96
12	16	2.5e-05	0.033	18.5	0.1	2	23	1084	1105	1083	1105	0.96
13	16	0.00013	0.17	16.3	0.2	1	23	1127	1150	1127	1150	0.95
14	16	0.44	5.8e+02	5.2	2.9	1	23	1156	1178	1156	1178	0.96
15	16	7.6e-05	0.1	17.0	0.3	1	23	1184	1206	1184	1206	0.98
16	16	0.0084	11	10.6	1.9	1	23	1212	1234	1212	1234	0.97

Sequence Information

Coding Sequence: ATGtcgttcataataaatttgttgaaggATGGCGAGGAAGTTCCGCTCGAAATTTATCCCCAAGATGATTTTAATTCGATCGTCGAAAGAGCGaatactttaGTCGGATACAAAATCGACATAAGCAGTTTTACCGGAGAAGATGTAGTGGATCCGTCAGACAATGTCTACGATTATTTCATGAACAACGAACCTTCTTTGAAAGATCACTTTGAATATGGCTCCAACAACGCACTCGAGTATTTGGAAGAGGACGCCGAAGCGATCAAAAAACTGTCCAACAACAGTACAATCATTATTGCCGGAGACGATTCGGATGAAAGgaatgtcataaaaataatagaacttTCAGATAATGAAGACAACGACGGTCAAGTTCGCATCAAAATGGAACCTCCGTTTATCAAATCTGAATTGTTAGAACTCCTCCCTATGTTAGAAAACGTATCCAACATGAATGAATCTGCAGACGGTGCGGATCAACTAGAAGGGTttcttttgaaagaaaaaatcaacGTTAATAGGATTATCGAAACAATCGTCAAAAATCGAGTCACGtgtcatttttgtaatatacGAGTATCTAACATGAAAGACCCCagaagaaattatatttttgatgaaaaaaatcaatcgatctTCAATCAGAACGTTCTGATGAATATTGTGATGAGCGCTAAACTGATATGCGGTAAATGTCTCAATAATAACTTTCTAAAATTAACCAAGTCcagtaaaaagttgaattcggATGAGAGTATTGTCGTCAGCGATAAAATGAAAGTTATCTACAGAAGTTTGCCCGACGAAGAAACGTTCAAGAGCCGTAGAAAATCTAGAATTATTGTGAAACAAGATGTCGATTCTTTGTTAGACGATGAAGATTATGTTGTGGCAAAGGAAAAAAAGAGAAGAGGGCGTAAAaaagccgccctcgccgccgctccTTCAAATTTTGTAGTTAGGAGGAAAATTACGTCGAATGTCACCGATGCTGAACTTCAGAAGAAAACGTCCGTTATCAAGAGGAAATTGGAAATGGACGGAACTATATCTGAATTTTGTGTCTCAAATGAAGAAGATATGCATTCTCAAAGTAAGAGAATGAAAATGCCCGGggaaaatgaattgatttgtCGtTCTTGTGGACTTCAATTCGAAGATCTCTCAGCAGTTGTTGAACATGGTCCTGCTCATCATGTCAATAATCGAATTAACGGAATACCGTGTGGTCTCTGTTTACGAAgtttcaaaagtattagtattttaaaaagacATGTATATTCCGATCATATACAATCGCAACCTATCAAAGCTGAAAAAAGGGACGAAATCAAGTTAGAAAATACCAAATATCAGAAAAAAGAGGAATATCTTGATGAACATGAAGCTGAAGACGATTTAACAGATagattacacaaatatttatctGGAGAAATAGATGCTGATACATTTTTCCAACATGAACACTCAAGAACTGTCCCAGATAgtcaagtTGTGccagatgaagatgatgatgatcttgAAGTTTGGATAGTTCAAGCCGAAAAACCTGGAGAAGAGAATGACAAAGAAAAAGTAGTAGATATATCTTCTCTAGACGATGACGAGCTTGAAGATGATGGAGATGAGTTAGCGTTTCTCAATGCTATTGACAATTCCACTAATAATGCAGAAAATGCCAACCAAATTAATGAAGCCTTTGAAGATGGTGATTATTATGAAGATCCTGAATATGAACCTGAAGAAAACGACGATAACGACAGTTGCAAATCTATAGAAATATCGAGACCGAGAAGAAGAATAGGCcaaggaaaatataaatgtgatatatgCAAAAAAGGATATACTTCTCAATTGCGTCTTGAGCAACATAAGTGTTGTCCCGGAAACATAGTTGATAAAAAAGACGACTTAACTTGTTTCATATGCAATGAAACATTCTTATCTAAAGTTCGATTACAGTTTCATAaACAAACTCACCGAGAAGGTGGTTGGCAAGAAATGGGATGTGATCAGTGCGGTCGCAGAGACTTCAATTCTGAACATGAACTGTTTGACCACATTTACTTTAGTCACTCAAAACCATTTATATGTCCTTATGAAGGATgcacaaaaacatttaaactcaaAAAATTGCTGAAGACCCATATGAAGGATCACGGCATAAAGAAATATGTGTGTAATATTTGCAACCAACGCTTCCAAGTTCATCAAACTCTCAAAGAACATATGGTGCTGCATATGAGGgtGAAACCTTTCCAATGTCACATTTGCCAAAAATATATGAGCAAAGCTTCTCGATTACGCATGCACTTGCTCGTTCATACCTCGCAACAAAATCCTGCTCACGTGCTTGTTTGTAAGATATGTGATGGTGCCTTTAAAGACGTCGAGGAAGCTGAGtcgcATACTGAGAAACCTGAGGCGTGCGAACCTAAAGTCGAAGATACTGATGGTATTTACGATGAAGAGATGTACGAAGATATGGGTATTGAAATCTTATCGcctaatagtttttataatgatCAAGAAATCAAACCCACTTGGAGAAAGGAAGACCcgttgaaaaaagAAGGCGTTGACAGTACGGAGGCTGGAAGTGGACCAACTTTATCGAGTAAACATAGTCTATTGATGCAATTGTCTGATTCTGCAAGAAAGACTATAACTGCTGTGTGGATCGATAAAGTTTACAGTTGTCAATATTGTGAAAAagtATATTACACGAAAGAAGCTCTTCATCAACACAGACATATTCACAGCAACAGTCGTGAACCATATCAATGTCACTTGTGCGAAGCGAGATTTCTCACCTACGCTAgaTGTACAGCACATAAATCGACCCATGGGTATTTCAAAGAAGGTGGTGCACCATCTTTGCGAGATTTCCCCGttatcaaacattatttatgtgATttatgcgacaaaagtaatttattatggACTACCGTTAGTGTCCATTATAGACATCATCATAGGTATAATGTGAACCGACGCGATCCTCCGCCATGTAAAAATTGCTGTCAACAGTTTTACAATAgttGGGATCTCGGTAAACATCGAAGGTTGAAGCATAGAAGAGAAGTTCACGCAGCTGCGAAGGCTCCTATCAAAGTTGTCAActATTCGTATAAGTGTTTGGAGTGTGATCAACAATTGCCCAATAAAGCTGCTTTGACGTCGCATAGAAAAGCCGCTCATGGAGATGGAGAAGATggaaaaaaacctaaaaacgcTGGTGTACTCGTTTGTTCCGAATGTGGAAAAACATATGCGACTAAACCAGCTTTACTCACACATATCAAATGGCACACTGAACATGGTGTTGGAATCGAAGCTGCCCGACGAAGAAAGAGGGCTTTCGGTAAAGGAAGTCATATATGCTCGACTTGCGGTCTCGGATTCTATTCAGCTGCAAACCTCAGAGCTCATAtagaTCGTATCCATGAAAAGTGTTATAAATATACGTGCGAAGAGTGCGGTAAAGGTCATTTTACCCATGTGGAGATGGAAACTCATAAACTCACACATACTGGTGAGCGTCCCTTCAAATGTCCGGACTGTCCCAGAGCCTACGTTACTAAAGCCATACTCAACAAACATTACAGGAATCACACTGGTGAGCGACCGTATTCTTGTGATCTTTGTGGAGCTGCGTTCAAAACGGCTCATTCTAGAAACTATCACAAACTCAAAcacgaaaacggaaaattacCTGCGCCACTCATAATTTTGGAAGTCAAAGGCGGAGATGCAAAAGGCTTAGAAGCCGCTTTACAAGAGATGCATggtATGGGTGAAAGTAAAAAAGAATCTAAAGCCATAAAACACTATATCGAAGACGGTGGAAATATCAAAGAAGAAATAGAAGAAGAGTTCCAGCAAGAAGTCAACGAAGAAGAAGTTCTCATAAGAACGTCGGAAGTTGACGAATCTGATGAAAACGTCATTACGGAGGAAACACCAGACGGTGTGCATATATTCTATAGAGGCATTGTTCGAGGCATGGACGAACAAGGATGTGAAAACGAGTACACAATAGAATATGAAGAAGCTCAGTAG
Protein Sequence: MSFIINLLKDGEEVPLEIYPQDDFNSIVERANTLVGYKIDISSFTGEDVVDPSDNVYDYFMNNEPSLKDHFEYGSNNALEYLEEDAEAIKKLSNNSTIIIAGDDSDERNVIKIIELSDNEDNDGQVRIKMEPPFIKSELLELLPMLENVSNMNESADGADQLEGFLLKEKINVNRIIETIVKNRVTCHFCNIRVSNMKDPRRNYIFDEKNQSIFNQNVLMNIVMSAKLICGKCLNNNFLKLTKSSKKLNSDESIVVSDKMKVIYRSLPDEETFKSRRKSRIIVKQDVDSLLDDEDYVVAKEKKRRGRKKAALAAAPSNFVVRRKITSNVTDAELQKKTSVIKRKLEMDGTISEFCVSNEEDMHSQSKRMKMPGENELICRSCGLQFEDLSAVVEHGPAHHVNNRINGIPCGLCLRSFKSISILKRHVYSDHIQSQPIKAEKRDEIKLENTKYQKKEEYLDEHEAEDDLTDRLHKYLSGEIDADTFFQHEHSRTVPDSQVVPDEDDDDLEVWIVQAEKPGEENDKEKVVDISSLDDDELEDDGDELAFLNAIDNSTNNAENANQINEAFEDGDYYEDPEYEPEENDDNDSCKSIEISRPRRRIGQGKYKCDICKKGYTSQLRLEQHKCCPGNIVDKKDDLTCFICNETFLSKVRLQFHKQTHREGGWQEMGCDQCGRRDFNSEHELFDHIYFSHSKPFICPYEGCTKTFKLKKLLKTHMKDHGIKKYVCNICNQRFQVHQTLKEHMVLHMRVKPFQCHICQKYMSKASRLRMHLLVHTSQQNPAHVLVCKICDGAFKDVEEAESHTEKPEACEPKVEDTDGIYDEEMYEDMGIEILSPNSFYNDQEIKPTWRKEDPLKKEGVDSTEAGSGPTLSSKHSLLMQLSDSARKTITAVWIDKVYSCQYCEKVYYTKEALHQHRHIHSNSREPYQCHLCEARFLTYARCTAHKSTHGYFKEGGAPSLRDFPVIKHYLCDLCDKSNLLWTTVSVHYRHHHRYNVNRRDPPPCKNCCQQFYNSWDLGKHRRLKHRREVHAAAKAPIKVVNYSYKCLECDQQLPNKAALTSHRKAAHGDGEDGKKPKNAGVLVCSECGKTYATKPALLTHIKWHTEHGVGIEAARRRKRAFGKGSHICSTCGLGFYSAANLRAHIDRIHEKCYKYTCEECGKGHFTHVEMETHKLTHTGERPFKCPDCPRAYVTKAILNKHYRNHTGERPYSCDLCGAAFKTAHSRNYHKLKHENGKLPAPLIILEVKGGDAKGLEAALQEMHGMGESKKESKAIKHYIEDGGNIKEEIEEEFQQEVNEEEVLIRTSEVDESDENVITEETPDGVHIFYRGIVRGMDEQGCENEYTIEYEEAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00816099;
90% Identity: iTF_00816099;
80% Identity: -