Basic Information

Insect: Hydropsyche tenuis
Gene Symbol: -
Assembly: GCA_009617725.1
Location: VTON01000210.1:59882-69997[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 2.4e-05 0.0017 18.7 1.3 2 23 181 202 180 202 0.97

2 31 7.1 5.2e+02 1.4 0.4 1 20 246 265 246 267 0.90

3 31 0.0048 0.35 11.4 0.9 3 20 287 304 285 306 0.93

4 31 0.33 24 5.6 0.5 2 19 337 354 336 357 0.92

5 31 0.00068 0.05 14.1 1.7 2 23 368 390 367 390 0.96

6 31 0.0001 0.0077 16.6 0.3 2 23 426 447 425 447 0.94

7 31 0.00086 0.063 13.7 5.5 2 23 466 488 465 488 0.96

8 31 1.1e-05 0.00084 19.7 1.4 2 23 506 528 505 528 0.97

9 31 0.5 36 5.1 4.4 2 23 551 572 547 572 0.94

10 31 0.00026 0.019 15.4 1.3 1 23 583 605 583 605 0.98

11 31 0.015 1.1 9.9 1.3 2 23 660 681 659 681 0.97

12 31 4.7e-05 0.0035 17.7 2.5 2 23 693 714 692 714 0.96

13 31 0.011 0.84 10.2 0.9 2 23 726 747 725 747 0.96

14 31 0.0083 0.61 10.7 4.4 1 23 753 776 753 776 0.93

15 31 3 2.2e+02 2.6 3.4 1 20 789 808 789 811 0.94

16 31 0.0089 0.66 10.5 4.4 1 23 822 844 822 845 0.96

17 31 0.00038 0.028 14.9 0.0 2 23 869 891 868 891 0.94

18 31 0.16 12 6.6 0.6 3 23 912 932 910 932 0.88

19 31 7.2 5.3e+02 1.4 2.6 5 20 940 955 939 957 0.87

20 31 0.0002 0.015 15.7 0.8 2 23 972 994 971 994 0.96

21 31 0.0022 0.16 12.5 4.3 1 23 1023 1045 1023 1045 0.95

22 31 0.92 67 4.2 0.3 2 21 1049 1068 1049 1069 0.93

23 31 0.5 37 5.1 0.3 2 23 1125 1146 1124 1146 0.96

24 31 0.0081 0.6 10.7 3.0 2 23 1153 1174 1152 1174 0.97

25 31 0.0045 0.33 11.5 0.7 2 23 1185 1207 1184 1207 0.95

26 31 0.49 36 5.1 3.4 2 23 1223 1241 1222 1241 0.93

27 31 0.7 52 4.6 3.3 1 19 1244 1262 1244 1265 0.93

28 31 8.5 6.2e+02 1.2 1.0 2 19 1296 1313 1296 1317 0.86

29 31 0.14 10 6.8 2.0 1 23 1323 1345 1323 1345 0.91

30 31 0.00019 0.014 15.8 4.3 2 23 1356 1378 1355 1378 0.96

31 31 1.2 89 3.8 3.9 2 23 1395 1413 1394 1413 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	2.4e-05	0.0017	18.7	1.3	2	23	181	202	180	202	0.97
2	31	7.1	5.2e+02	1.4	0.4	1	20	246	265	246	267	0.90
3	31	0.0048	0.35	11.4	0.9	3	20	287	304	285	306	0.93
4	31	0.33	24	5.6	0.5	2	19	337	354	336	357	0.92
5	31	0.00068	0.05	14.1	1.7	2	23	368	390	367	390	0.96
6	31	0.0001	0.0077	16.6	0.3	2	23	426	447	425	447	0.94
7	31	0.00086	0.063	13.7	5.5	2	23	466	488	465	488	0.96
8	31	1.1e-05	0.00084	19.7	1.4	2	23	506	528	505	528	0.97
9	31	0.5	36	5.1	4.4	2	23	551	572	547	572	0.94
10	31	0.00026	0.019	15.4	1.3	1	23	583	605	583	605	0.98
11	31	0.015	1.1	9.9	1.3	2	23	660	681	659	681	0.97
12	31	4.7e-05	0.0035	17.7	2.5	2	23	693	714	692	714	0.96
13	31	0.011	0.84	10.2	0.9	2	23	726	747	725	747	0.96
14	31	0.0083	0.61	10.7	4.4	1	23	753	776	753	776	0.93
15	31	3	2.2e+02	2.6	3.4	1	20	789	808	789	811	0.94
16	31	0.0089	0.66	10.5	4.4	1	23	822	844	822	845	0.96
17	31	0.00038	0.028	14.9	0.0	2	23	869	891	868	891	0.94
18	31	0.16	12	6.6	0.6	3	23	912	932	910	932	0.88
19	31	7.2	5.3e+02	1.4	2.6	5	20	940	955	939	957	0.87
20	31	0.0002	0.015	15.7	0.8	2	23	972	994	971	994	0.96
21	31	0.0022	0.16	12.5	4.3	1	23	1023	1045	1023	1045	0.95
22	31	0.92	67	4.2	0.3	2	21	1049	1068	1049	1069	0.93
23	31	0.5	37	5.1	0.3	2	23	1125	1146	1124	1146	0.96
24	31	0.0081	0.6	10.7	3.0	2	23	1153	1174	1152	1174	0.97
25	31	0.0045	0.33	11.5	0.7	2	23	1185	1207	1184	1207	0.95
26	31	0.49	36	5.1	3.4	2	23	1223	1241	1222	1241	0.93
27	31	0.7	52	4.6	3.3	1	19	1244	1262	1244	1265	0.93
28	31	8.5	6.2e+02	1.2	1.0	2	19	1296	1313	1296	1317	0.86
29	31	0.14	10	6.8	2.0	1	23	1323	1345	1323	1345	0.91
30	31	0.00019	0.014	15.8	4.3	2	23	1356	1378	1355	1378	0.96
31	31	1.2	89	3.8	3.9	2	23	1395	1413	1394	1413	0.94

Sequence Information

Coding Sequence: ATGGCGCTGCTGGCGCTCAGCAAATGTCGGCTGTGCCTCAAGCTCGGCGATTTTTACTCTATCTTCGCTGAGGACAATTCGGTGCAGCTGGCGCGCATGGCGATGGCTTGCTCTGATGTACAGattcAAGAAGGTGACGGCTTACCCGACAAAGTATGCGGAGAATGTGTTGAAAAACTTAGCTCTGCGTATATATTCAAACAGCAATGTGAACGATCAGATACAGAACTTAGAAAATCCGTAAACAATTCTGgatTTAAAAGTACGCCTACCAGGAAAGTTGAGAGTCACGAAAAACCATTAACAAGATCATCTAAAAATCCTCCTAGAACCAAAAGAAAACATGATGAAGTTGCATCTTCAGAAATCAATCTCAACTCGACGGGAGGTTTATTAGAAGAAAGATACAGTGTCGACGTTCCTAATACTTTATCTTTAGAAACCACCTATAATACAAACAAAGGGTTGAAGAATAAAAAGCGACGGCTTTCCGAATCGTCGAATTCATTCTCTTCTTCCACTCCTCTGAAAGAGAAGATTTCTTGTAAATATTGCGATAagtctttcaataaaaatcaaagccTTTACGGCCATATGAAAATACACAGATACGAAAGCTTGTACGATAACGATAACGCCTCGGCGTCTCATTCCATCGCTTCGGAGAACGACAATCTTTCGCAGGCCAGCGAAACGCCCAACAACTCCAATTCGCATTTGAGGGAAGGCGAAAAGTTCAATTGCGAAAATTGCGGCGACCAATATCACAATAGAGTACTTTTCAACGAACACGTCGAACAATGTAAAGACGGAAAATGCGACGAAAAGGCCGCTATGGCGTTATTGACGAAACTGTTCTGTCCGATTTGTAAGAATAAATACAAACAGAAGACTTACCTCAAAAAACATTTAGGTAGAAGCGCTTGTGGTGTGGAATTGAAGAAGATTTTAGGCGAAGACGACGTTTATTTGCCGAGCGAAATCAATTATTCGCCCGTCTGTAATATACAGTGTTCGAATTGTGATAGTAAATTTCGATCTTACGCCTTGATGGttagacattttttcaaatgtttgatAGACAAAGGTATTGTTAATATTCGTTGCTTAAGCTGCGATGTCGGATTCTCTacgaaaaataacttttataggCATATGAAGAGGTTTCATATATTAGAGAACGTATCTTTCAAAAAAGgcatgaaaagaaaatattcgatcGCCGACAAAATACCTGTCGAAAACACGACTAAACAATCTGTTTCTGGTTCACTTCAATGCAACAAATGCAACAAATCGTTCGATACCCAAATCCAATTGGTCATGCATTTGGCCGCTCATATGGCGAACATCGATGACGATTCAAAAGTTTCGAGTAAATTTAGGAAAACtttaaaatgtgttaaatGCAATAAGAAATTTAGgtaTAAAGCATTTTTACGCAAGCATTTAAAAGTATGCCACAACAACCTGCCGTCGGATTTGTCTATTTTGGATGTTCCTGTAAAAGCAAATCAATGCGATTTGTGTGGGAAGAGTTTCAAATACGCAAAATCTCTCACTtggcataaaaatacaaaacatccGACGATAGACGATTCTCTCGTATCTACTCAAAAAAGAGGCATTGAAATTTCTAAGTGTCCCGCCAAATGTTTGCATTGTGatttagtttttgaaaacgAACACGCAACAAAAATGCATAACCGTATGCATATCGAAAACAATGTCAAGGTGAAAAATGAATACAGCTGTCCCGAATGTGATATAAAATTCACCAACACTAAATTCTTCCGGCTTCATATAAAAGAGCATAACGATCAAGCGTGTTTCGATGACGATAACGACGCCGTTTACGACGCCAGCATATCGAATTATTGCGAAGTCACTAGCAATGTGGTCGAAGAAGAAAACGACGTCAAACCTTTCATCGATATTTTAGGGGAGCAAAAACCAGTCGTCGAACTAAACGGCATAACTTGTTCTGTTTGcgataaaaaattggaatctGTCAGAGGTTATCATTTGCATATGAGAACGCATTCAAAAGGGAATTCCAAAAAAAGCGTCGATTTATCATGTTTTATATGCAAAGAGAGGTTTTCGCAGaaagaaaaattccaaaagCACATGAAAATCCATTACAACGACAACAACTTGGATCCGGCTCTTTTGAAATGTTCGATATGCAAAAAGCAATCGAAGAACATGAGATCTTACATCGCACATATGTCGTGGCATACGTTTAACGGACGATTCAAATGTCACATGTGCACCGAAACATTCCcctatttgaaattatacaagAATCATATGGATTTCAAACATCAAATCAACATCGACGAGCTCGAAGACCCGACACATTTCCAGTGTTATTTATGCAAGAAGTATTACGACAGCGACATTTCGCTGCAGTACCACATACTCTGTCATCAAAAGGGCGAGTCTTCGAAGGAAGAAAAATACGAATGCGCCCAATGCGACGAAAAATTCACCACGAAATACCAACATTTGATACACATGCAGTCCCATCATCAGGTCTTTCCCACGAAAGCGCCTCCGAGAAAAAAGTTCAGCAAAATAGCGAAGAAGATGCCGAAAATTGTCTGTCCCGTCTGTGATATGGTGTTCGTGTCTCGCGTTAGATTAAACAGACACTTGAACGCTATGCATCCGGTCAAAAAAATGGTGAAGAAGAACGATCCCGACGCCGAATCGATCAAAAAGCacatttgtatattatgtacAAAAGAATTCCCCACAAACGATAGGCTGCAGTCTCATCTCGTTTTGCATAAACGAAAACCAGATTTGTTCAAATGTAcgttatgttttaaaaagtcGCTTTCGCTCAAAACGCATTTGTACCACATAAAAGGTCATCTCCTCAAGCAACACAAGGACAAACCTATAAAGTGTGATAATTGCGATAAATTGTTTATACGCAGACAAGAACTGCGCCTGCATTTACGTCAAATGCAcgatattgttgaaaattacgtgaaaaaaatagacaaagACGACGAATGGAAGCCCGGAGAGTTGGAAAAGAGCGAATTGCAACAACACCAGTGTCACGTATGCGGTAAAGTTCTCCGCAACGAGAGTACGTATCACAAACATCTAGTGTGGCACAACACTAGGCGTTGTAACTACTgttttgcatattttgataagaaaaCATTCCTTTTAGCCCATGTTATGTACAATTGTGATAAGAAAAAGTTGATCGGAAACTCGGATCAGTTCGATAAAAAGTTAAAGTGCCACATTTGcttgaaacaattttccattttagtCAAATTACATTGTCATCTGAAAGTTCAACACAATTCGGATCCGCTCGATAAAGAAACGGTGTCCGAGTCTTCGGTGTGTGATTTTTGTTTCTCCGTTTTCAGTTCCGAAGAACGCATGTTGGCGCATCGAAAAGTCCATTTTCACTCCGGGACGATGAAATGTACAGTTTGTTCCAAGTTGTTTAGGCAGATGtcgtatttcaaaaatcataaaatacgcCATTACAAAGAATCGTACGAACACAATCCTTTGAATTGCGCGCATTGCGACGAAAAATTCGCATCGATGCGCTTGTACGTGAAACATCTCCGAATAGTCCACAAAACGCCAATGGTTTGGCTCGTCCCCGAATTGATACCGTCGAAAAAATGCTCGATATGCAATAAGGAATTCGTGCACATGGAAAGACACATGATGTATCACGACAAGTACAAATGCAAAAAAtgcaatcaatattttatgtccGAAGTGTTATTCACGGAACACTTTTGCGAGTTCGAAagcgaaaatgaaaacgataaCTCCAAACTTAATAATAACGGTTCTCTAGAAAATTCTTTATCTATCGATAATCAAGGATATGAAGAATGCGGCTATTGCTTCAAACCGATTTCGTCGTcttacacaaaaacaaaacatgatTCTAACCATAGTAAaatggtgtattttttttgtcgtttgtgCGATAGGAAGTTCTTCATGAAGTCGGCTTTCAATATTCACAGTACGGCACATCGTTTAcaacatttcaaaaagaaTCCGCTACGATGCAGGCACTGCGGGGAATCCTTCACTCGTTATCAACATTACACCGACCACATACGACAAGTACACAACGATCCAGAAACCATGGAGTTTCATTTAAAGCCTAGTCCGCCGAAAAAATGCCTGATCTGCAAAAAACCCTTTGTCAATCTCCATCGACATTACAGATATCACCTCGAACTACGATGTAGAAACTgcttaaaatacatattgtcTCAAAAACTCTTCAACGTTCATAAGTGCGACGACGCCGACAATCCCAACATGGCTGTAACGTTCGACGGAGATATCACGTCTTTGAAAGAACCGGATTTCAACGAGTGGCAAAGCGAGAGAATGGTCGAAGCGATACCCAGAAACGAGGACTTCATGACGCCCAACGTTTTGATCGGATCCGATAGAAACAATACGACGATGCACAACACTCGTCGTATGAACAATACGTCGGAGAATGTCCACGTGCGAGATCCCAACACTTCGTTGGCCAATTCCGTTCCCCAAAACTACCTGACGAACGCGAATTCTCTGAACCAGCACAACTTCGAGAACTTTTCGCCGATCATTTCGTCGACGGTGTCGTTGAGTTCGTCGGCGGCCGAAAAGGACAAAGACGATACTATAGATCTAGTGAATATTCAAGTCAAGAGTGAACCTATCGATCAGTATTACAAGGATTGTcaattcgattttcaaaattcgttGATGGATATAAACAGGTCGGGTTGA
Protein Sequence: MALLALSKCRLCLKLGDFYSIFAEDNSVQLARMAMACSDVQIQEGDGLPDKVCGECVEKLSSAYIFKQQCERSDTELRKSVNNSGFKSTPTRKVESHEKPLTRSSKNPPRTKRKHDEVASSEINLNSTGGLLEERYSVDVPNTLSLETTYNTNKGLKNKKRRLSESSNSFSSSTPLKEKISCKYCDKSFNKNQSLYGHMKIHRYESLYDNDNASASHSIASENDNLSQASETPNNSNSHLREGEKFNCENCGDQYHNRVLFNEHVEQCKDGKCDEKAAMALLTKLFCPICKNKYKQKTYLKKHLGRSACGVELKKILGEDDVYLPSEINYSPVCNIQCSNCDSKFRSYALMVRHFFKCLIDKGIVNIRCLSCDVGFSTKNNFYRHMKRFHILENVSFKKGMKRKYSIADKIPVENTTKQSVSGSLQCNKCNKSFDTQIQLVMHLAAHMANIDDDSKVSSKFRKTLKCVKCNKKFRYKAFLRKHLKVCHNNLPSDLSILDVPVKANQCDLCGKSFKYAKSLTWHKNTKHPTIDDSLVSTQKRGIEISKCPAKCLHCDLVFENEHATKMHNRMHIENNVKVKNEYSCPECDIKFTNTKFFRLHIKEHNDQACFDDDNDAVYDASISNYCEVTSNVVEEENDVKPFIDILGEQKPVVELNGITCSVCDKKLESVRGYHLHMRTHSKGNSKKSVDLSCFICKERFSQKEKFQKHMKIHYNDNNLDPALLKCSICKKQSKNMRSYIAHMSWHTFNGRFKCHMCTETFPYLKLYKNHMDFKHQINIDELEDPTHFQCYLCKKYYDSDISLQYHILCHQKGESSKEEKYECAQCDEKFTTKYQHLIHMQSHHQVFPTKAPPRKKFSKIAKKMPKIVCPVCDMVFVSRVRLNRHLNAMHPVKKMVKKNDPDAESIKKHICILCTKEFPTNDRLQSHLVLHKRKPDLFKCTLCFKKSLSLKTHLYHIKGHLLKQHKDKPIKCDNCDKLFIRRQELRLHLRQMHDIVENYVKKIDKDDEWKPGELEKSELQQHQCHVCGKVLRNESTYHKHLVWHNTRRCNYCFAYFDKKTFLLAHVMYNCDKKKLIGNSDQFDKKLKCHICLKQFSILVKLHCHLKVQHNSDPLDKETVSESSVCDFCFSVFSSEERMLAHRKVHFHSGTMKCTVCSKLFRQMSYFKNHKIRHYKESYEHNPLNCAHCDEKFASMRLYVKHLRIVHKTPMVWLVPELIPSKKCSICNKEFVHMERHMMYHDKYKCKKCNQYFMSEVLFTEHFCEFESENENDNSKLNNNGSLENSLSIDNQGYEECGYCFKPISSSYTKTKHDSNHSKMVYFFCRLCDRKFFMKSAFNIHSTAHRLQHFKKNPLRCRHCGESFTRYQHYTDHIRQVHNDPETMEFHLKPSPPKKCLICKKPFVNLHRHYRYHLELRCRNCLKYILSQKLFNVHKCDDADNPNMAVTFDGDITSLKEPDFNEWQSERMVEAIPRNEDFMTPNVLIGSDRNNTTMHNTRRMNNTSENVHVRDPNTSLANSVPQNYLTNANSLNQHNFENFSPIISSTVSLSSSAAEKDKDDTIDLVNIQVKSEPIDQYYKDCQFDFQNSLMDINRSG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00815312;
90% Identity: iTF_00815312;
80% Identity: -