Hten004501.1
Basic Information
- Insect
- Hydropsyche tenuis
- Gene Symbol
- -
- Assembly
- GCA_009617725.1
- Location
- VTON01000009.1:3223480-3227075[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.2e-15 1.6e-10 40.8 0.0 4 111 9 112 7 136 0.74 2 2 0.00021 3.7 6.7 0.1 339 382 143 188 133 197 0.86
Sequence Information
- Coding Sequence
- ATGCTTGCGATACCGCCACGTGTTGAGCGAGATAGTCTGCGCGAGAGGGAGCGGCACGCCCGCGCGCAGATGTCCTCGCAAGGGAACGAAATTCAGGAAGGTGTACCCATGTTTAGGCCGCCGGTTAAAGTCAGTCCGGCGGCTACAGATCGTGTTACCCAACAAATTCAAAGCAGGCTTGGTGATTATCACACAGTCAAACATTTTTTGGACGATCCCAAATCGTCAATAGGTGTTTATGGCGAGCCAGCTAGTCCAGCACCAGGTGGACCATTGCGAGGGGGTGAATTCAAGAAACCTCATCATACGTCTTCTCAAAATGGAAGGCCCCATCAACGGATGCCACCTTACCCCAAAtaTCCAGACGGGCTGCCTATGGGGGTACCCAAGCGAGGACCGTCCACCAGATTGTATAATGGACGTGTACAACCGACTTTGCCCTCCGAATTGGACGAAGTACAAACTATATTCAATgAAATGAAATCCTTGTCTGTTGTTCAACCGTTATCTGCTATTGCTCAAACACCTCATAAAGAAATGgaatctaaatttatatttaatgctGGAACTCTTATAAAAGTTAGTGTGATATTTGTctga
- Protein Sequence
- MLAIPPRVERDSLRERERHARAQMSSQGNEIQEGVPMFRPPVKVSPAATDRVTQQIQSRLGDYHTVKHFLDDPKSSIGVYGEPASPAPGGPLRGGEFKKPHHTSSQNGRPHQRMPPYPKYPDGLPMGVPKRGPSTRLYNGRVQPTLPSELDEVQTIFNEMKSLSVVQPLSAIAQTPHKEMESKFIFNAGTLIKVSVIFV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -