Hten010062.1
Basic Information
- Insect
- Hydropsyche tenuis
- Gene Symbol
- -
- Assembly
- GCA_009617725.1
- Location
- VTON01000147.1:48583-49152[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-07 0.00014 21.5 0.0 2 37 19 54 18 65 0.87
Sequence Information
- Coding Sequence
- ATGCCTAGTGATACAAATGATGGTCAGAGGAGGCAAAAGAAGGGTACCTGGGATCCTGCAGACATGCATAAAGTCGTGGAAAAGGTACTGATCAAAGAGATGAGTGCACGTCAATCCGCAGAGCGCTATCAAGTACCACGAACTACATTGAATGATAGAGTTagtgctattaaaaaaaataaagaaatgtcCATTGAGCCAATTATGGGTCGTTtctttaatactttttcatcTGAACATGAAGAAATATTGGCAGAATATGTTAAAGACCTGGCCAACCGGCTAATGCCTTTAAACAGGAAAGAATTTTTATGTCTCGCTTTCCAACTAGCCGAGAAATTAAAGTTACCTCACCAGTTCAATCAAGAGAAGAAATCTGCAGGAAAACACTACACTAAAAGCAATGTCGAATCATTTAAGCGAGAGAAAAATGTCCTTGTAGGAAAAGATGTTAACAAGAAAAGTAAGGTTTCAAGAAAAGATGTTACTAAAAAAAGTAAGAACTTGCTTTCAGGAAAAGATGTTAGTatgaaaacaaagaaaaataaaaacgaaaacctaCCTCCTTAG
- Protein Sequence
- MPSDTNDGQRRQKKGTWDPADMHKVVEKVLIKEMSARQSAERYQVPRTTLNDRVSAIKKNKEMSIEPIMGRFFNTFSSEHEEILAEYVKDLANRLMPLNRKEFLCLAFQLAEKLKLPHQFNQEKKSAGKHYTKSNVESFKREKNVLVGKDVNKKSKVSRKDVTKKSKNLLSGKDVSMKTKKNKNENLPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00815730;
- 90% Identity
- iTF_00815731; iTF_00815732; iTF_00815733; iTF_00815734; iTF_00815735; iTF_00815736; iTF_00815737; iTF_00815738;
- 80% Identity
- -