Basic Information

Insect: Hydropsyche betteni
Gene Symbol: Bcl11b
Assembly: GCA_028571205.2
Location: JAOXNN020000030.1:297440-301676[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00011 0.14 16.5 3.8 1 23 161 184 161 184 0.97

2 17 9e-05 0.12 16.8 1.4 2 23 204 226 203 226 0.96

3 17 8.8e-05 0.12 16.8 1.3 1 23 234 257 234 257 0.98

4 17 7.2e-06 0.0095 20.2 3.5 1 23 271 294 271 294 0.98

5 17 1.5e-05 0.02 19.2 1.7 1 23 304 327 304 327 0.97

6 17 0.054 71 8.0 2.1 1 23 333 356 333 356 0.90

7 17 1.6 2.1e+03 3.4 0.8 3 23 404 425 403 425 0.96

8 17 0.025 33 9.1 4.0 1 23 445 468 445 468 0.94

9 17 5.6e-05 0.075 17.4 1.6 3 23 481 502 479 502 0.97

10 17 0.0015 2 12.9 1.4 1 23 558 581 558 581 0.92

11 17 0.01 13 10.3 5.5 1 23 589 612 589 612 0.96

12 17 0.11 1.5e+02 7.0 7.5 1 23 624 646 624 646 0.97

13 17 0.014 19 9.9 0.6 1 23 653 675 653 675 0.98

14 17 0.026 34 9.0 0.9 1 23 681 705 681 705 0.97

15 17 0.12 1.6e+02 7.0 3.7 3 23 714 734 713 734 0.98

16 17 0.078 1e+02 7.5 4.8 1 23 741 763 741 763 0.98

17 17 0.027 36 9.0 0.3 1 23 769 792 769 792 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00011	0.14	16.5	3.8	1	23	161	184	161	184	0.97
2	17	9e-05	0.12	16.8	1.4	2	23	204	226	203	226	0.96
3	17	8.8e-05	0.12	16.8	1.3	1	23	234	257	234	257	0.98
4	17	7.2e-06	0.0095	20.2	3.5	1	23	271	294	271	294	0.98
5	17	1.5e-05	0.02	19.2	1.7	1	23	304	327	304	327	0.97
6	17	0.054	71	8.0	2.1	1	23	333	356	333	356	0.90
7	17	1.6	2.1e+03	3.4	0.8	3	23	404	425	403	425	0.96
8	17	0.025	33	9.1	4.0	1	23	445	468	445	468	0.94
9	17	5.6e-05	0.075	17.4	1.6	3	23	481	502	479	502	0.97
10	17	0.0015	2	12.9	1.4	1	23	558	581	558	581	0.92
11	17	0.01	13	10.3	5.5	1	23	589	612	589	612	0.96
12	17	0.11	1.5e+02	7.0	7.5	1	23	624	646	624	646	0.97
13	17	0.014	19	9.9	0.6	1	23	653	675	653	675	0.98
14	17	0.026	34	9.0	0.9	1	23	681	705	681	705	0.97
15	17	0.12	1.6e+02	7.0	3.7	3	23	714	734	713	734	0.98
16	17	0.078	1e+02	7.5	4.8	1	23	741	763	741	763	0.98
17	17	0.027	36	9.0	0.3	1	23	769	792	769	792	0.97

Sequence Information

Coding Sequence: ATGGAGGGACCCCCGGGGGCCGAGGGGGCcgaggggggcgcggggggcgccgaCAGCGGGGGGGAGCGCGAGGGCGAAGTCCCCGCGCTGAAAAGGCCCCGCGAACCTTCGCTCGACGGCGTCCACTACGACGGTTACCATGAGCTGAATATGgaGACACCTCTTCAAAATGCACCAGATGTTGTTCGAAGTCGTGAAAATTCTCCGTCCACTCCGTCGTCGGTCAACGATGATGACTACAAAAATAGCGATTCGTCCGACAACACGCAAACCGACAACGCTTCGTCCGAAGACGAACGTTTAAGAAACATAGTTACCAGTAAAAGAATAAAAAGGAACCCTCGCCGACAGAGCACGTCGACCAGGGAGGCCGCGGTCAAAGAGAGCATAATGCGAGACCTTTCTCAAATTCAAGAGAGAAGGGCCACTTCTATCGAACGGTTGATTCACGACAACGAAAAGTTCATGCCGAAGAATTCGTACAAATGCGATATCTGCACGAGGAACTTTCGTTCGGCTTACCATTTAGACCAGCACAAAAGAAACAACCACGAAGTGGGCGAAACTCAAGAAGACGCGGACATGCTAGAAGACGAAGAGGGTCAATGGACGTGCGAGAAATGCGGCCTCAAATACAACACGAAGACGTTGCTCCTGTATCACATGCGTAGAAAACACAATTccgatgttaattttcaatacacttGCCAATATTGCGGATTAGAATACGCCAAAAAAAACGGTTTGTACAAACATATGATGAGAAAACATAACGTTCAGAACTACACGTTTGAATCgcccaaagaaaaatataaatgcaagtATTGCGGCACAGCTTACGAGTTCAAACAGAGCCTGTTTCGTCACATGAAAACCAAACACTTGGAACCGGACTTGAATCAGATCGTGTACAAATGTAAGTTTTGCGGAACTTCTTTCGGACAACGTCAGAATCTTTTTGACCACATCAAAGAGCAACACGACAGCGAGGAGATATATTCATGTGAACATTGTGGATTCGTATGCGTCGAGAAGAACGAACTCGTGTTGCATTTCAGCGAAAACCATCTCCAGAACACGCTGACTAGCGGAGGCGAATGTTCCGAGAACGACATATCAGACGGGCACGTGCCCGTCAGCGAAGCGAAAGAAGAAATCCTCCAAACGTCGTGGTGGAAGTCTTCGACGACGTCAAACGGTAAACGAGcttgtaaattttgtaatatgatcCTGTCGAACGGTAACAGATTAAGATACCACCTGAAAGTGAAGCATCCCAACGAGTTTCAAGCGCTCAAAAACGAAATGACTTTCGAAGAGGAGGAAAAGAAGTATAAATGCGTCATATGCGGCTTGCAGTACAAGAACAAGATGTGTCTACGATATCATTCCAAATTGAAACACGGAGATCCGGCGAATCTTCAGAATCAATCGTACGGCTGCGAATATTGCGGCCAAACATTCAAGTCGACCACTTACTTAAAACAACACGTAAAGAAAAAACATGATGACGACGAAGATTACGTGACGAGTTCCGTCAAAGCCCGCAACAAGTACAAAcacgtttatattgaaaaacctcCTCCGAAAGTGTCCGACGACGAGAATGTCATCGCTTGCGAAGAAGTGCCGGAGCCTGAATCGGCAGATAAGCCAGACTTGGAAAAGCGATATATATGCGACGTGTGCGAAAACACGTTCACTTCGATCAGTTCGCTGAAGCACCACAAGCTGGCCAAACACAACAGCCCTTCGGACAAATTGTATCAGTGCCCTCATTGTTCGTATTGTGCCAAATTCAATCAGTATTTGCAAAAACACTTGGCTAGTAAGCACCCGGATTCGGATTTCGCTCCTCAGCGAGAAGTTCACATGTGCACCGTCTGCGACTACAAAAGCATGAACAAATATCACTATCAGCGGCATTTCAAAAGTCATTTCACCGAAGAGAAGCGGTTCATGTGCGAGTTTTGCGATTACCGAACGAACTTGCAGAGCTCGATCATCGTCCACAGACGTATCCATACAAAAGAGAAACCGTACGTTTGCGATATAGAAAATTGTCAGTATCGATGCGCTCAAAAGACGGCAATGACGATCCATCAGTTGAGCCACAATCCGGAAAAGAATACGCAATTTTGTCATTTGTGCAGTTTCAAAACGGTCAATAAGTACTTGTTCAAAGCGCACGTCAACAAACATAAATTGGACGATAAAGAGTACAAATGCGATCGTTGCACGTTCATATGCAAAGATTCTAAAAGCTTCGAGTCCCACAAACAAATACACATGgataatatgatgtttaagtGTAGCTATTGCGAATTCGAAACGCAGTTACAAATATCGTTGGAAGCGCATATCAAATCGGAGCATAGATACGACCAGAACCACATCGTACCCTTAGAAGTTCATATGAAAACGGAGCATCAGTACATTCAGAGCTCGCTCGACATGCACATGAAGCCCGAACATCAATACGGTCTATCGAGCATGCATTTGCACGACTCCCATATAAAACCGGACCATTACAACCCGATGCCGCTCGACTGCCAGATGAAACCGCACGAGCACCAGTACAATTCGATGATGAGCCCGCATCTGGACAGGCACCACTACAGTCCCATCCACGTGCCGATGGACGCCCACATGAACCATTTGGAGCATCGTCAGTACAACGCGGGCGGCATGATGCCCCTGCCGCTCGACTGCCACATGAAACCGGAGCATCGGTACACGCCGACGGGCATCGTCGACGCCAGCATATGCAAGCCGGTCAACTACGTTTACGACGGCAACGTGAGGTCGCAGATGGTCTCCGCCGATATGATCAACCCGTATTTGAATCCggtcaaatga
Protein Sequence: MEGPPGAEGAEGGAGGADSGGEREGEVPALKRPREPSLDGVHYDGYHELNMETPLQNAPDVVRSRENSPSTPSSVNDDDYKNSDSSDNTQTDNASSEDERLRNIVTSKRIKRNPRRQSTSTREAAVKESIMRDLSQIQERRATSIERLIHDNEKFMPKNSYKCDICTRNFRSAYHLDQHKRNNHEVGETQEDADMLEDEEGQWTCEKCGLKYNTKTLLLYHMRRKHNSDVNFQYTCQYCGLEYAKKNGLYKHMMRKHNVQNYTFESPKEKYKCKYCGTAYEFKQSLFRHMKTKHLEPDLNQIVYKCKFCGTSFGQRQNLFDHIKEQHDSEEIYSCEHCGFVCVEKNELVLHFSENHLQNTLTSGGECSENDISDGHVPVSEAKEEILQTSWWKSSTTSNGKRACKFCNMILSNGNRLRYHLKVKHPNEFQALKNEMTFEEEEKKYKCVICGLQYKNKMCLRYHSKLKHGDPANLQNQSYGCEYCGQTFKSTTYLKQHVKKKHDDDEDYVTSSVKARNKYKHVYIEKPPPKVSDDENVIACEEVPEPESADKPDLEKRYICDVCENTFTSISSLKHHKLAKHNSPSDKLYQCPHCSYCAKFNQYLQKHLASKHPDSDFAPQREVHMCTVCDYKSMNKYHYQRHFKSHFTEEKRFMCEFCDYRTNLQSSIIVHRRIHTKEKPYVCDIENCQYRCAQKTAMTIHQLSHNPEKNTQFCHLCSFKTVNKYLFKAHVNKHKLDDKEYKCDRCTFICKDSKSFESHKQIHMDNMMFKCSYCEFETQLQISLEAHIKSEHRYDQNHIVPLEVHMKTEHQYIQSSLDMHMKPEHQYGLSSMHLHDSHIKPDHYNPMPLDCQMKPHEHQYNSMMSPHLDRHHYSPIHVPMDAHMNHLEHRQYNAGGMMPLPLDCHMKPEHRYTPTGIVDASICKPVNYVYDGNVRSQMVSADMINPYLNPVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00815261; iTF_00816023;
90% Identity: iTF_00816023;
80% Identity: iTF_00815261;